Manage Custom Tracks
 
Genome: Human    Assembly: Feb. 2009 (GRCh37/hg19)    [hg19]
Name Description Type Doc
H3K4me3 normoxiaH3K4me3 normoxiabigWig 
H3K4me3 hypoxiaH3K4me3 hypoxiabigWig 
Minus Hypoxia combinedBigWigRANDOMallcombinedCOLLAPSEDWIGminusreconstructedHypoxiabigWig 
Plus Hypoxia combinedBigWigRANDOMallcombinedCOLLAPSEDWIGplusreconstructedHypoxiabigWig 
Minus Normoxia CombinedBigWigRANDOMallcombinedCOLLAPSEDWIGminusreconstructedNormoxiabigWig 
Plus Normoxia CombinedBigWigRANDOMallcombinedCOLLAPSEDWIGplusreconstructedNormoxiabigWig 
HIF1a siRNABigWigRANDOMallcombinedHIF1knockdownbigWig 
HIF2a siRNABigWigRANDOMallcombinedHIF2bigWig 
HIF 1&2a siRNABigWigRANDOMallcombinedhif1and2bigWig 
control siRNABigWigRANDOMallcombinedHYPOXIA_OLIGOFECTAMINbigWig 
Hypoxia RNA-seqHypoxia RNA-seqbigWig 
Normoxia RNA-seqNormoxia RNA-seqbigWig 
Hyp NuclearHyp NuclearbigWig 
Nor NuclearNor NuclearbigWig 
HIF1a ChIP-seqHIF1abigWig 
HIF2a ChIP-seqHIF2abigWig 
check all / clear all 

Managing Custom Tracks
 

This section provides a brief description of the columns in custom track management table. For more details about managing custom tracks, see the Genome Browser User's Guide.

  • Name - a hyperlink to the update page where you can edit your track data.
  • Description - the value of the "description" attribute from the track line, if present. If no description is included in the input file, this field contains the track name.
  • Type - the track type, determined by the Browser based on the format of the data.
  • Doc - displays "Y" (Yes) if a description page has been uploaded for the track; otherwise the field is blank.
  • Items - the number of data items in the custom track file. An item count is not displayed for tracks lacking individual items (e.g. wiggle format data).
  • Pos - the default chromosomal position defined by the track file in either the browser line "position" attribute or the first data line. Clicking this link opens the Genome Browser or Table Browser at the specified position (note: only the chromosome name is shown in this column). The Pos column remains blank if the track lacks individual items (e.g. wiggle format data) and the browser line "position" attribute hasn't been set.