Manage Custom Tracks
 
Genome: Mouse    Assembly: Dec. 2011 (GRCm38/mm10)    [mm10]
Name Description Type Doc
G9a_f_f_4H_pIC_H3K9me2_redo_fastq_prefilter_bowtie.sam.bedG9a_f_f_4H_pIC_H3K9me2_redo_fastq_prefilter_bowtie.sam.bedwiggle_0 
G9a_f_f_L2K_H3K9me2_fastq_prefilter_bowtie.sam.bedG9a_f_f_L2K_H3K9me2_fastq_prefilter_bowtie.sam.bedwiggle_0 
G9a_f_f_L2K_H3K9me2_redo_fastq_prefilter_bowtie.sam.bedG9a_f_f_L2K_H3K9me2_redo_fastq_prefilter_bowtie.sam.bedwiggle_0 
G9a_f_f_PolII_total_fastq_prefilter_bowtie.sam.bedG9a_f_f_PolII_total_fastq_prefilter_bowtie.sam.bedwiggle_0 
G9a_minus_minus_4h_pIC_H3K9me2_fastq_prefilter_bowtie.sam.bedG9a_minus_minus_4h_pIC_H3K9me2_fastq_prefilter_bowtie.sam.bedwiggle_0 
G9a_minus_minus_4h_pIC_PolII_total_fastq_prefilter_bowtie.sam.bedG9a_minus_minus_4h_pIC_PolII_total_fastq_prefilter_bowtie.sam.bedwiggle_0 
G9a_minus_L2K_H3K9me2_fastq_prefilter_bowtie.sam.bedG9a_minus_L2K_H3K9me2_fastq_prefilter_bowtie.sam.bedwiggle_0 
G9a_minus_minus_L2K_H3K9me2_fastq_prefilter_bowtie.sam.bedG9a_minus_minus_L2K_H3K9me2_fastq_prefilter_bowtie.sam.bedwiggle_0 
G9a_minus_minus_L2K_PolII_total_fastq_prefilter_bowtie.sam.bedG9a_minus_minus_L2K_PolII_total_fastq_prefilter_bowtie.sam.bedwiggle_0 
G9a_f_f_4h_pIC_polII_total_fastq_prefilter_bowtie.sam.bedG9a_f_f_4h_pIC_polII_total_fastq_prefilter_bowtie.sam.bedwiggle_0 
G9a_f_f_4h_pIC_H3K9me2_fastq_prefilter_bowtie.sam.bedG9a_f_f_4h_pIC_H3K9me2_fastq_prefilter_bowtie.sam.bedwiggle_0 
5SML.bigwig5SML.bigwigbigWig   
5SMR.bigwig5SMR.bigwigbigWig   
5SWL.bigwig5SWL.bigwigbigWig   
5SWR.bigwig5SWR.bigwigbigWig   
5UWL.bigwig5UWL.bigwigbigWig   
5UWR.bigwig5UWR.bigwigbigWig   
6SML.bigwig6SML.bigwigbigWig   
6SMR.bigwig6SMR.bigwigbigWig   
6SWL.bigwig6SWL.bigwigbigWig   
6SWR.bigwig6SWR.bigwigbigWig   
6UWL.bigwig6UWL.bigwigbigWig   
6UWR.bigwig6UWR.bigwigbigWig   
ISML.bigwigISML.bigwigbigWig   
ISMR.bigwigISMR.bigwigbigWig   
ISWL.bigwigISWL.bigwigbigWig   
ISWR.bigwigISWR.bigwigbigWig   
IUWL.bigwigIUWL.bigwigbigWig   
IUWR.bigwigIUWR.bigwigbigWig   
KSML.bigwigKSML.bigwigbigWig   
KSMR.bigwigKSMR.bigwigbigWig   
KSWL.bigwigKSWL.bigwigbigWig   
KSWR.bigwigKSWR.bigwigbigWig   
KUWL.bigwigKUWL.bigwigbigWig   
KUWR.bigwigKUWR.bigwigbigWig   
check all / clear all 

Managing Custom Tracks
 

This section provides a brief description of the columns in custom track management table. For more details about managing custom tracks, see the Genome Browser User's Guide.

  • Name - a hyperlink to the update page where you can edit your track data.
  • Description - the value of the "description" attribute from the track line, if present. If no description is included in the input file, this field contains the track name.
  • Type - the track type, determined by the Browser based on the format of the data.
  • Doc - displays "Y" (Yes) if a description page has been uploaded for the track; otherwise the field is blank.
  • Items - the number of data items in the custom track file. An item count is not displayed for tracks lacking individual items (e.g. wiggle format data).
  • Pos - the default chromosomal position defined by the track file in either the browser line "position" attribute or the first data line. Clicking this link opens the Genome Browser or Table Browser at the specified position (note: only the chromosome name is shown in this column). The Pos column remains blank if the track lacks individual items (e.g. wiggle format data) and the browser line "position" attribute hasn't been set.