Mouse methylome studies Tracks
 
Mouse methylome studies tracks

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Common  Common methbase tracks for the mm39 assembly  
DRP000505  Mouse DNA methylome (MethylC-seq) [Blastocyst, Embryonic Stem (ES) Cell, Sperm]  
DRP000598  Mouse oocyte methylome [Dnmt1-deficient GV Oocyte, Dnmt3L-deficient GV Oocyte, Dnmt3a-deficient GV Oocyte, Dnmt3b-deficient GV Oocyte, Wild-Type GV Oocyte, Wild-Type NG Oocyte]  
DRP000638  Mouse PGC DNA methylome (PBAT) [E10.5fPGC, E10.5mPGC, E13.5fPGC, E13.5mPGC, E16.5fPGC, E16.5mPGC]  
DRP002386  Methylome and gene expression of neonatal prospermatogonia and early postnatal undifferentiated and differentiating spermatogonia [Testes]  
DRP003273  Methylome and transcriptome dynamics during mouse germ cell specification/differentiation in vitro  
DRP003407  Software updates in the Illumina HiSeq platform affect whole-genome bisulfite sequencing [EpiLC, IMR-90, Spermatogonia]  
DRP003544  Mouse NS/PCs DNA methylome (PBAT) [Astrocyte, Embryonic Stem Cell, Neural Stem/Progenitor Cell, Neuron, Oligodendrocyte]  
DRP003670  Methylome of expanded mouse primordial germ cell-like cells [BVSC]  
DRP004153  Mouse blactocyst methylome [Blastocyst, Parthenogenetic Blastocyst]  
DRP004308  MIWI2 targets RNAs transcribed from piRNA-dependently methylated regions in mouse gonocytes [Gonocyte]  
DRP006395  The role of DNMT3B in inflammation-related hepatocarcinogenesis [Dnmt3bKO_NoTAA_1_WGBS, Dnmt3bWT_NoTAA_1_WGBS]  
DRP008086  DNA methylation analysis of oocytes in a PCOS mouse model [Oocyte]  
DRP008292  Whole genome bisulfite sequence of tissue and organoid [JB_colon_2, JB_colon_3, JB_colon_O2_Or, JB_colon_O3_Or]  
DRP008439  The DNMT3A ADD domain recognizing histone H3K4me0 is essential for processive DNA methylation and maternal imprinting in mouse oocytes [Embryo E10.5, Oocyte, Parthenogenesis Blastocyst]  
DRP008539  Investigation of the effects of sperm DNA methylation disturbance by testicular histone hyperacetylation on the next generation in mouse [Sperm]  
DRP010625  The identification of differentially methylated genes between hepatocytes and skeletal muscle of wild-type mice [Hepatocyte_01, Hepatocyte_02, Hepatocyte_03, Skeletal_Muscle_01, Skeletal_Muscle_02, Skeletal_Muscle_03]  
DRP010881  Role of Tet3 in DNA demethylation in mouse SCNT embryos [SCNT Embryo]  
DRP011267  whole genome bisulfite sequencing of colon and colon-derived organoids [Colon, Colon-Derived Organoid]  
DRP011537  Tracking hematopoietic stem cell aging reveals its heterogeneous composition [Bone Marrow]  
ERP001204  DNA_methylation_reprogramming_in_PGCs [Embryonic Stem Cells, Epiblast Cells, Primordial Germ Cells]  
ERP001632  B_Cell_Methylome [B Cells]  
ERP001953  The dynamics of genome-wide DNA methylation reprogramming in mouse primordial germ cells [Epiblast, J1 ES Cell, Primordial Germ Cell]  
ERP003744  DNMT3_KO_BS_seq [EPC, Epiblast]  
ERP003907  Methylome_and_Hydroxymethylome_of_iPSC [2769STDY6182410-sc-2382182, 2769STDY6182411-sc-2382183, BSeq_MEF1-sc-1861756, BSeq_MEF2-sc-1861757, BSeq_MEF3-sc-1861758, BSeq_P29_iPSC44-sc-2014730, BSeq_P29_iPSC45-sc-2014731, BSeq_P29_iPSC66-sc-2014732, BSeq_P29_iPSC67-sc-2014733, BSeq_P29_iPSC72-sc-2014734, BSeq_P29_iPSC73-sc-2014735, BSeq_P8_iPSC67-sc-1861783, BSeq_P8_iPSC73-sc-1861785, BSeq_TMBD1-sc-1861759, BSeq_TMBD2-sc-1861760, BSeq_TMBD3-sc-1861761, BSeq_T_S_Exp10-sc-1861768, BSeq_T_S_Exp10-sc-1861769, BSeq_T_S_Exp11-sc-1861770, BSeq_T_S_Exp11-sc-1861771, BSeq_T_S_Exp16-sc-1861772, BSeq_T_S_Exp16-sc-1861773, TMBD10_BS-sc-2013-09-18T12:28:21Z-1692906, TMBD10_oxBS-sc-2013-09-18T12:28:31Z-1692907, iPSC19_BS-sc-2013-09-18T12:30:10Z-1692914, iPSC19_oxBS-sc-2013-09-18T12:31:26Z-1692918, iPSC20_BS-sc-2013-09-18T12:31:06Z-1692915, iPSC20_oxBS-sc-2013-09-18T12:30:31Z-1692919, iPSC27_BS-sc-2013-09-18T12:28:40Z-1692908, iPSC27_oxBS-sc-2013-09-18T12:29:46Z-1692911, iPSC28_BS-sc-2013-09-18T12:30:17Z-1692909, iPSC28_oxBS-sc-2013-09-18T12:29:53Z-1692912, iPSC29_BS-sc-2013-09-18T12:30:24Z-1692910, iPSC29_oxBS-sc-2013-09-18T12:30:03Z-1692913, iPSC37_BS-sc-2013-09-18T12:31:14Z-1692916, iPSC37_oxBS-sc-2013-09-18T12:30:37Z-1692920, iPSC38_BS-sc-2013-09-18T12:31:20Z-1692917, iPSC38_oxBS-sc-2013-09-18T12:30:43Z-1692921, oxBSeq_MEF1-sc-1861762, oxBSeq_MEF2-sc-1861763, oxBSeq_MEF3-sc-1861764, oxBSeq_P29_iPSC44-sc-2014736, oxBSeq_P29_iPSC45-sc-2014737, oxBSeq_P29_iPSC66-sc-2014738, oxBSeq_P29_iPSC67-sc-2014739, oxBSeq_P29_iPSC72-sc-2014740, oxBSeq_P29_iPSC73-sc-2014741, oxBSeq_TMBD1-sc-1861765, oxBSeq_TMBD2-sc-1861766, oxBSeq_TMBD3-sc-1861767, oxBSeq_T_S_Exp10-sc-1861774, oxBSeq_T_S_Exp10-sc-1861775, oxBSeq_T_S_Exp11-sc-1861776, oxBSeq_T_S_Exp11-sc-1861777, oxBSeq_T_S_Exp16-sc-1861778, oxBSeq_T_S_Exp16-sc-1861779, pMEFAIDKO_BS-sc-2013-09-18T12:31:41Z-1692923, pMEFAIDKO_oxBS-sc-2013-09-18T12:31:54Z-1692925, pMEFWt_BS-sc-2013-09-18T12:31:34Z-1692922, pMEFWt_oxBS-sc-2013-09-18T12:31:48Z-1692924]  
ERP004116  Whole genome bisulfite sequencing of samples reprogramming to iPSC [1iPSC, 2MEF, 2iPSC, D11H, D16H, D16L, D18H, D21L, D21L0, D2H, D5H, D8H, ESC]  
ERP004476  Reprogramming_around_an_epigenetic_barrier_with_TET1 [2_KLF4_2a-sc-2117074]  
ERP005247  DNA methylation is required for the control of stem cell differentiation in the small intestine [Differentiated Intestinal Epithelium, Intestinal Stem Cell (LGR5 Positive)]  
ERP008742  Germ_cell_methylation_dynamics [056202C0-C771-11E6-Bf9C-68B59976A384, 056B78A0-C771-11E6-Bf9C-68B59976A384, 05727D80-C771-11E6-Bf9C-68B59976A384, 0Ec6Eaf0-5Fb7-11E6-B4F3-68B59976A384, 0Ee5Bd90-5Fb7-11E6-B4F3-68B59976A384, 11____EB2_B_-sc-2176524, 12____EB2_BS_-sc-2176525, 25Ab5C60-5Fb7-11E6-9477-68B599768938, 2Fe8D220-5Fb7-11E6-B4F6-68B59976A384, 2Ff491F0-5Fb7-11E6-B4F7-68B59976A384, 2Ffde0C0-5Fb7-11E6-B4F7-68B59976A384, 3F12Cf30-5Fb7-11E6-9477-68B599768938, 3F2015A0-5Fb7-11E6-9477-68B599768938, 47Ad1C40-5Fb7-11E6-B4F7-68B59976A384, 6Fc872F0-1B75-11E6-B065-68B59976A384, 6Ffc7B40-1B75-11E6-B065-68B59976A384, 83494700-1B75-11E6-B769-68B599768938, 835Db960-1B75-11E6-B769-68B599768938, 9____EB1_BS_-sc-2176522, A3_mPGCLC1-sc-2383193, C3_mPGCLC2-sc-2383195, D2_mPGCLC1-sc-2383188, D3_mPGCLC2-sc-2383196, Df89Bf70-C770-11E6-Bf9C-68B59976A384, Dfc31Ef0-C770-11E6-Bf9C-68B59976A384, Dfca9900-C770-11E6-Bf9C-68B59976A384, E3_mPGCLC2-sc-2383197, F1_hPGCLC1-sc-2383182, F28250B0-C770-11E6-83A1-68B599768938, F2895590-C770-11E6-83A1-68B599768938, F2978660-C770-11E6-83A1-68B599768938, F2_mPGCLC1-sc-2383190, F3_mPGCLC2-sc-2383198, G2_mPGCLC1-sc-2383191, G3_mPGCLC2-sc-2383199, H3_mPGCLC2-sc-2383200, PBAT20150318_S1-sc-2268397, PBAT20150318_S2-sc-2268398, PBAT20150318_S22-sc-2268418, PBAT20150318_S5-sc-2268401, PBAT20150318_S6-sc-2268402, hES1-sc-2351342, hES2-sc-2351343, hES3-sc-2351344, hKSR2-sc-2351346, hKSR3-sc-2351347]  
ERP010942  We present the first genome-scale analysis of the effect of CpG methylation on DNA-binding of TFs. [Embryonic Cell, Embryonic Cell Deficient In Tet1, Tet2 And Tet3, GP5D Cell, LHSAR Cell, LHSAR Cell With HOXB13 Transduced, LoVo Cell, VCap Cell]  
ERP012781  Mice deficient of Myc super-enhancer region reveal a differential control mechanism between normal and pathological growth [Null_Fib-Bis-1, Null_Fib-Bis-2, WT_Fib-Bisseq-1, WT_Fib-Bisseq-2]  
ERP015660  Quantifying epigenotype variations between mouse B and CD4+ T lymphocytes [CD4-positive, Alpha-Beta T Cell, Mature B Cell]  
ERP016240  Genome-wide DNA methylation landscape defines specialization of regulatory T cells in tissues [Fat_Treg_R1, LN_Tconv_R2, LN_Tconv_R3, LN_Treg_R2, LN_Treg_R3, Liver_Treg_R1, Skin_Treg_R1, Skin_Treg_R2, Skin_Treg_R3]  
ERP022031  Epigenetic regulation and transcriptional repression by Tet1 in the early post-implantation mouse embryo: WG Bisulfite sequencing  
ERP022077  A MILI independent piRNA biogenesis pathway residually loads MIWI2 empowering partial germline reprogramming activity. [Undifferentiated Spermatogonia]  
ERP107409  Defective germline reprogramming rewires the spermatogonial transcriptome [Undifferentiated Spermatogonia]  
ERP107948  DEEP data release for IHEC/EpiRR 2018 data freeze. [Fibroblast, Hepatocyte, Liver, White Adipocyte]  
ERP110807  Methylation_profiles_in_cancer_induced_mouse_liver_tumours [Eea28C50-B5A6-11E8-9Efc-68B59976A384, Eeab22A2-B5A6-11E8-9Efc-68B59976A384, Eeb10690-B5A6-11E8-9Efc-68B59976A384, Eebf133E-B5A6-11E8-9Efc-68B59976A384, Eeced512-B5A6-11E8-9Efc-68B59976A384, Eed4Cb20-B5A6-11E8-9Efc-68B59976A384, Eedadf7E-B5A6-11E8-9Efc-68B59976A384, Eee12E74-B5A6-11E8-9Efc-68B59976A384, Eee7C87E-B5A6-11E8-9Efc-68B59976A384, Eeee2660-B5A6-11E8-9Efc-68B59976A384, Eef7663A-B5A6-11E8-9Efc-68B59976A384, Eefea85A-B5A6-11E8-9Efc-68B59976A384, Ef04C618-B5A6-11E8-9Efc-68B59976A384, Ef1E8A62-B5A6-11E8-9Efc-68B59976A384, Ef24Bbd0-B5A6-11E8-9Efc-68B59976A384, Ef2Ad826-B5A6-11E8-9Efc-68B59976A384, Ef30D4B0-B5A6-11E8-9Efc-68B59976A384, Ef3Fe72A-B5A6-11E8-9Efc-68B59976A384, Ef46105A-B5A6-11E8-9Efc-68B59976A384, Ef4C7B52-B5A6-11E8-9Efc-68B59976A384, Ef703Fd8-B5A6-11E8-9Efc-68B59976A384, Ef764356-B5A6-11E8-9Efc-68B59976A384, Ef89B832-B5A6-11E8-9Efc-68B59976A384, Ef942A06-B5A6-11E8-9Efc-68B59976A384, Ef9Eba34-B5A6-11E8-9Efc-68B59976A384, Efa444D6-B5A6-11E8-9Efc-68B59976A384, Efa91B82-B5A6-11E8-9Efc-68B59976A384, Efaeaec6-B5A6-11E8-9Efc-68B59976A384, Efc13Ea6-B5A6-11E8-9Efc-68B59976A384, Efe65754-B5A6-11E8-9Efc-68B59976A384, F01B9838-B5A6-11E8-9Efc-68B59976A384, F027766C-B5A6-11E8-9Efc-68B59976A384, F031Def4-B5A6-11E8-9Efc-68B59976A384, F04855E4-B5A6-11E8-9Efc-68B59976A384, F0629Aee-B5A6-11E8-9Efc-68B59976A384, F06D826A-B5A6-11E8-9Efc-68B59976A384, F07934A2-B5A6-11E8-9Efc-68B59976A384, F083A63A-B5A6-11E8-9Efc-68B59976A384, F08F6Ae2-B5A6-11E8-9Efc-68B59976A384, F099A6A6-B5A6-11E8-9Efc-68B59976A384, F0A5C68E-B5A6-11E8-9Efc-68B59976A384, F0B08C4A-B5A6-11E8-9Efc-68B59976A384, F0Baffc2-B5A6-11E8-9Efc-68B59976A384, F0C76F3C-B5A6-11E8-9Efc-68B59976A384, F0D4E266-B5A6-11E8-9Efc-68B59976A384, F0D985F0-B5A6-11E8-9Efc-68B59976A384, F0E139Bc-B5A6-11E8-9Efc-68B59976A384, F0Eb69E6-B5A6-11E8-9Efc-68B59976A384, F0F772Ea-B5A6-11E8-9Efc-68B59976A384, F10215Ec-B5A6-11E8-9Efc-68B59976A384]  
ERP120304  Multi-omics characterization of MEK inhibitor resistant pancreatic cancer based on a genetically engineered mouse model-derived in vitro system [1, 2, 3, 4, 6, 7, 8, 9]  
ERP126361  DNA methylation profiles of mouse sperm in response to antibiotic-induced gut microbiota dysbiosis using whole-genome bisulfite sequencing [Cauda Epididymal Sperm]  
ERP128231  CpG island reconfiguration for the establishment and synchronization of polycomb functions upon exit from naive pluripotency [MT-SL WGBS, WT-SL WGBS]  
ERP130901  Epigenomic rewiring of mouse hippocampus after resistance and endurance exercise training [Hippocampus]  
ERP138895  Study of a mouse model of angioimmunoblastic T-cell lymphoma [ena-SAMPLE-TAB-05-07-2022-16:18:22:259-81379, ena-SAMPLE-TAB-05-07-2022-16:18:22:259-81380, ena-SAMPLE-TAB-05-07-2022-16:18:22:259-81381, ena-SAMPLE-TAB-05-07-2022-16:18:22:259-81382]  
ERP139499  Whole genome bisulfite sequencing of liver samples of five mammals (human, rhesus macaque, mouse, rat and dog) [Liver]  
ERP155689  Whole Genome Bisulfite Sequencing of CLDN6High vs CLDN6Low Sorted EpiSCs and APSD, and WT vs Pbx1-KO EpiSCs [24H Differentiation, Epiblast Cell]  
SRP004162  Dynamic epigenomic oscillations in differentiated cells  
SRP007354  DNA binding factors shape the mouse methylome at distal regulatory regions [BIS_seq] [ES-derived Neuronal Progenitor Cells, Embryonic Stem Cells]  
SRP011945  Base Resolution Analysis of 5-Hydroxymethylcytosine in the Mammalian Genome [E14Tg2A, H1]  
SRP013702  Dnmt3a protects active chromosome domains against cancer-associated hypomethylation [Healthy Lung Tissue, Lung Tumors]  
SRP013703  GSE57230: Widespread contribution of transposable elements to the innovation of gene regulatory networks [mouse ENCODE] [Bone Marrow, Cerebellum, Cerebral Cortex, Embryonic Facial Prominence, Forebrain, Heart, Hindbrain, Intestine, Kidney, Large Intestine, Limb, Liver, Lung, Midbrain, Neural Tube, Olfactory Bulb, Small Intestine, Spleen, Stomach, Thymus]  
SRP016893  Whole-genome bisulfite sequencing of two distinct interconvertible DNA methylomes of mouse embryonic stem cells [ES-cells]  
SRP017139  Dnmt2-dependent methylomes lack biologically relevant DNA methylation patterns [ES Cells]  
SRP017350  Density and methylation state of CpG dinucleotides define histone variant specific retention of nucleosomes in mouse spermatozoa [Sperm]  
SRP017503  Tissue-specific methylomes reveal epigenetic memory in adult mouse tissue [Bone Marrow, Cerebellum, Colon, Cortex, Heart, Intestine, Kidney, Liver, Lung, Olfactory Bulb, Pancreas, Placenta, Skin, Spleen, Stomach, Thymus, Uterus]  
SRP017572  FGF Signaling Inhibition in ESCs Drives Rapid Genome-wide Demethylation to the Epigenetic Ground State of Pluripotency [E14 ES]  
SRP018523  Bisulfite-Seq profiling of undifferentiated ESCs, and in vitro derived primordial germ cells (iPGCs) [ESCs- V6.5, ESCs-Rosa26-GFP, iPGCs, iPGCs-Rosa26-GFP, iPGCs-V6.5]  
SRP018963  High resolution nulceotide level methylation map of female mouse primary keratinocytes [Primary Keratinocytes]  
SRP019026  CG methylated microarrays identify novel methylated sequence bound by the CEBPB|ATF4 heterodimer that are active in vivo [Primary Dermal Fibroblasts]  
SRP020633  Mus musculus Epigenomics [General Sample From]  
SRP025152  Epigenetic and genetic changes during mouse hematopoietic stem cell aging [Bisulfite-Seq] [Bone Marrow Derived Primary HSCs]  
SRP025993  Maintenance of DNA methylation in embryonic stem cells depends on the histone H3K9 methyltransferases (K9 KO Methyl-Seq) [Embryonic Stem Cells]  
SRP025996  Maintenance of DNA methylation in embryonic stem cells depends on the histone H3K9 methyltransferases (Dnmt3ab KO Methyl-Seq) [Embryonic Stem Cells]  
SRP026048  Global epigenomic reconfiguration during mammalian brain development [Brain (Cerebral Cortex), Brain (Dorsal Prefrontal Cortex), Brain (Frontal Cortex), Brain (Middle Frontal Gyrus), Embryonic Stem Cells]  
SRP026536  5mC Oxidation by Tet2 Modulates Enhancer Activity and Timing of Transcriptome Reprogramming during Differentiation [Embryonic Stem Cells]  
SRP028709  Large conserved domains of low DNA methylation maintained by 5-hydroxymethycytosine and Dnmt3a [Bisulfite-Seq] [Bone Marrow Derived Primary HSCs]  
SRP028826  Gene expression and chromatin analysis of fused mouse-rat cells [Immortalized Tail Fibroblast]  
SRP029721  Genome-wide regulatory domains and their interactions in Mus musculus [Hematopoetic Stem Cells, Splenic B Cells]  
SRP029902  Role of de novo DNA methyltransferases in hematopoietic stem cells (WGBS) [Bone Marrow Derived Primary HSCs]  
SRP032967  Distribution, recognition and regulation of non-CpG methylation in the adult mammalian brain (Bisulfite-seq) [Dentate Gyrus]  
SRP033288  Dynamic DNA methylation in cardiac myocyte development, maturation and disease [Cardiac Myocyte, Cardiac Tissue]  
SRP033304  The complete methylome of hematopoietic stem cells and their immediate progeny [HSC (LSK, CD34-, CD48-, CD150+), MPP (LSK, CD34+, CD48+, CD150-), MPP1 (LSK, CD34+, CD48-, CD150+), MPP2 (LSK, CD34+, CD48+, CD150+)]  
SRP034857  Large conserved domains of low DNA methylation maintained by 5-hydroxymethycytosine and Dnmt3a (CMS bisulfite-seq) [Bone Marrow Derived Primary HSCs]  
SRP037785  Two waves of de novo methylation during mouse germ cell development [Germ Cells]  
SRP039504  Single base resolution analysis of 5-formyl and 5-carboxyl cytosine reveals the actual promoter DNA methylation dynamics in embryonic stem cells [MAB-Seq] [Embryonic Stem Cells]  
SRP040524  CG hypomethylation in Lsh-/- mouse embryonic fibroblasts is associated with de novo H3K4me1 formation and altered cellular plasticity [Cell Line, Primary MEFs]  
SRP040627  Imprinted expression is different in visceral yolk sac and cystic embryoid body endoderm [Visceral Yolk Sac Endoderm]  
SRP041083  Programming and inheritance of parental DNA methylomes in mammals [2-Cell Embryo, 4-Cell Embryo, E13.5 Female PGC, E13.5 Male PGC, E3.5 Embryo, E6.5 Embryo, E7.5 Embryo, Inner Cell Mass, MII Oocyte, Sperm]  
SRP041257  Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity [ESCs (E14)]  
SRP041376  Tet proteins in DNA demethylation and cell fate restriction [ES Cell Line E14Tg2a]  
SRP041760  Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation [Bisulfite-Seq] [Embryonic Stem Cells]  
SRP041847  Altered epigenetic programming links intestinal inflammation to colon cancer (Bisulfite-seq) [Colon Epithel]  
SRP042360  Dnmt3L-histone H3 binding is necessary for male fertility and non-CG methylation [DNMT3 A/A, Wild Type]  
SRP042409  Rlf, a widely-spaced zinc finger protein, is involved in maintaining epigenetic marks at CpG island shores and enhancer elements across the genome [E10.5 Embryo Rep1, E10.5 Embryo Rep2, E14.5 Liver Rep1, E14.5 Liver Rep2, E18.5 Liver Rep1, E18.5 Liver Rep2]  
SRP043370  Tet1 and Tet2 mediate epigenetic regulation of developmental genes by protecting DNA methylation canyons against hypermethylation [Bisulfite-Seq] [Embryonic Fibroblasts]  
SRP045054  The developmental potential of iPSCs is greatly influenced by the selection of the reprogramming factors [Embryonic Stem Cells, Induced Pluripotent Stem Cells]  
SRP045179  Gender-specific post-natal demethylation and establishment of epigenetic memory [Liver]  
SRP045747  Setdb1 is required for persistence of H3K9me3 and repression of endogenous retroviruses in mouse primordial germ cells [SSEA1+ Primordial Germ Cells]  
SRP047165  Distinct roles of DNMT1-dependent and –independent methylation patterns in the genome of mouse ES cells [Embryonic Stem Cells]  
SRP047397  Genome-wide characterization of DNMT-deficient mouse ESCs reveals dynamicity of differentially-methylated-regions and its impact on bivalency composition [ES Cell]  
SRP049191  Single-base resolution analysis of active DNA demethylation using methylase-assisted bisulfite sequencing [E14Tg2A, V6.5]  
SRP049223  Transcription and Imprinting Dynamics in Developing Postnatal Male Germline Stem Cells [Spermatogonia]  
SRP049674  Epigenomic Signatures of Neuronal Diversity in the Mammalian Brain [Brain (Neocortex), Excitatory Pyramidal Neurons, Parvalbumin-Positive (PV) Inhibitory Neurons]  
SRP049697  DNA methylation status of Individual 4T1 Clonal Populations [4T1 Mammary Cancer Cell Line, Parental Cell Line]  
SRP049936  DNA methylation in mammalian placentas [Cerebrum, Cordblood, Extraembryonic Membrane, Placenta, Trophoblasts]  
SRP049965  MORC1 represses transposable elements in the mouse male germ line [Sorted Germ Cells]  
SRP050145  An alternative pluripotent state confers interspecies chimaeric competency [WGBS] [E5.75 Derived EpiSCs, E5.75 Derived rsEpiSCs]  
SRP052235  HP1 is involved in regulating the global impact of DNA methylation on alternative splicing [R1 Embryonic Stem Cells]  
SRP055147  Maternal DNA methylation regulates early trophoblast development [Trophoblast]  
SRP056705  An epigenetic memory of pregnancy in the mouse mammary gland [Basal Differentiated, Basal Mammary Stem Cells, Basal Progenitor, Luminal Alveolar, Luminal Ductal, Luminal Progenitor, Luminal Total]  
SRP057157  Competition between DNA methylation and transcription factors determines binding of NRF1 [Embryonic Stem Cells]  
SRP057505  Active DNA demethylation at enhancers during the vertebrate phylotypic period [Brain, Sox10+ Cells, Whole Embryo]  
SRP059433  Gender Differences in Global but not Targeted Demethylation in iPSC Reprogramming [BS Seq AIDKO MEF1, BS Seq D21 iPSC Clone3, BS Seq D29 AIDKO iPSC Clone1, BS Seq D29 AIDKO iPSC Clone2, BS Seq D29 MALE iPSC Clone1, BS Seq D29 MALE iPSC Clone2, BS Seq D29 MALE iPSC Clone3, BS Seq D29 iPSC Clone3, BS Seq D6 SSEA1 Positive 1, BS Seq D6 SSEA1 Positive 2, BS Seq D6 SSEA1 Positive 3, BS Seq D6 Thy1 Positive 1, BS Seq D6 Thy1 Positive 2, BS Seq D6 Thy1 Positive 3, BS Seq D60 AIDKO iPSC Clone1, BS Seq D60 MALE iPSC Clone1, BS Seq D60 MALE iPSC Clone2, BS Seq D60 MALE iPSC Clone3, BS Seq D60 iPSC Clone2, BS Seq D60 iPSC Clone3, BS Seq ESC 1, BS Seq ESC 2, BS Seq ESC 3, BS Seq MALE MEF 1, BS Seq MALE MEF 2, BS Seq MALE MEF 3, BS Seq MEF 1, BS Seq MEF 2, BS Seq MEF 3, BS Seq P29 iPSC Clone1, Fibroblast, Reprogramming Fibroblast]  
SRP059940  Chromatin dynamics and the role of G9a in gene regulation and enhancer silencing during early mouse development [Epiblast Stem Cells, Epiblast-Like Cells]  
SRP060643  De novo DNA methyltransferases DNMT3A and DNMT3B are essential of global DNA methylation maintenance [BS-Seq] [ES-cells]  
SRP060646  De novo DNA methyltransferases DNMT3A and DNMT3B are essential of global DNA methylation maintenance [TAB-Seq] [ES-cells]  
SRP060660  MIWI2 and MILI have differential effects on piRNA biogenesis and DNA methylation  
SRP061339  Sequence Features Accurately Predict Genome-wide MeCP2 Binding in vivo [Olfactory Epithelium]  
SRP061876  An epigenetic switch ensures transposon repression upon acute loss of DNA methylation in ES cells (WGBS) [J1 WT ES Cell]  
SRP062482  TET proteins regulate lineage specification and TCR-mediated expansion of iNKT cells (WGBS) [iNKT Cells]  
SRP062557  DNMT3A and TET2 Compete and Cooperate to Repress Differentiation Lineage-Specific Factors in Hematopoietic Stem Cells [Tet2 Knockout Hematopoietic Stem Cell]  
SRP062575  Genetic and epigenetic variation among inbred littermates: identification of metastable epialleles in the mouse [Adult Liver]  
SRP062705  Whole genome bisulfite sequencing of sperm from a mouse heterozygous for a mutation in Setdb1 (MommeD13) and a wildtype mouse. [Sperm]  
SRP063015  Epigenomic Landscapes of Retinal Rods and Cones [Rd7 Rod Photoreceptors, WT Cone Photoreceptors, WT Rod Photoreceptors]  
SRP063093  Acute loss of TET function results in aggressive myeloid cancer in mice [WGBS] [LSK Cells]  
SRP063275  New roles for DNA cytosine modification, eRNA, anchors and super-anchors in developing B cell progenitors [Rag1 Deficient pro-B, Tcf3(E2A) Deficient pre-pro-B]  
SRP063453  Unique Broad Histone Lysine 4 Methylation Domains in Mouse Oocytes and Dynamic Regulation during Maternal to Zygotic Transition [P12 Oocyte, P15 Oocyte]  
SRP065034  Mus musculus and Mus spretus sperm methylation [Testis]  
SRP065509  Trans-effects of sub-chromosomal duplications on DNA methylation patterns in mouse models of Down syndrome: whole genome bisulfite sequencing of cerebral samples from Dp(10)1Yey and Dp(16)1Yey mouse models.  
SRP065556  Dynamic Changes in Histone Modifications Precede de novo DNA Methylation in Oocytes [Oocyte]  
SRP066668  genomic DNA from MEF cells [Cultured MEF Cells]  
SRP067094  Chromatin decompaction coupled MuERVL endogenous retrovirus activation induces genome-wide DNA demethylation [E14 Cell Line Untransfected Negative Control, MuERVL+_Zscan4+]  
SRP067341  DNA methylation oscillations at CpG poor enhancers in primed embryonic stem cells [PBAT Bisfulfite-seq] [E14 Embryonic Stem Cell]  
SRP067447  Genetic and Epigenetic Variation, but Not Diet, Shape the Sperm Methylome [Spermatozoa]  
SRP068043  Dynamic epigenomic landscapes during early lineage specification in mouse embryos [Ectoderm, Embryonic Stem Cell, Endoderm, Epiblast, Inner Cell Mass, Mesoderm, Primitive Streak, Trophectoderm, Visceral Endoderm]  
SRP068730  Epigenetic reprogramming enables the primordial germ cell-to-gonocyte transition (WGBS) [PGC]  
SRP069120  Mus musculus strain:C57BL/6 Epigenomics [Liver, MEFs In Culture]  
SRP069139  ZFP57 maintains the parent-of-origin-specific expression of the imprinted genes and differentially affects non-imprinted targets in mouse embryonic stem cells (BS-seq and RRBS) [Embryonic Stem Cells]  
SRP069154  Isoform switch of TET1 regulates DNA demethylation and mouse development [mESCs]  
SRP070637  Single-cell multi-omics sequencing of mouse early embryos and embryonic stem cells [Embryonic Stem Cell]  
SRP070642  Methylation and gene expression profiling in Dnmt3a-deficient chronic lymphocytic leukemia and peripheral T-cell lymphoma in mice. [Spleen]  
SRP071233  Iron-Heme-Bach1 Axis Is Involved In Erythroblast Adaptation To Iron Deficiency [Erthroblast (Bach1 KO), Erthroblast (WT)]  
SRP071782  Mammalian sperm exhibit epigenetic priming of embryonic and adult regulatory landscapes (BS-Seq) [Sperm]  
SRP074072  WGBS assessment of global methylation alterations in Dnmt3aKO/FLT3-ITD lymphoid leukemia [Leukemic Cells, Thymus Derived CD4/CD8 Double Positive T Cells]  
SRP074379  Genome-wide map of DNA methylation to unravel the function of EBF1 C-terminus domain [Ebf1-/- c-Kit+ Fetal Liver Cells]  
SRP075309  Mus musculus Epigenomics [ES]  
SRP075981  GEO accession GSE82125 is currently private and is scheduled to be released on May 30, 2017. [ES-derived Neural Progenitor Cells, Embryonic Stem Cells]  
SRP076056  Role of Tet proteins in B cell development [Pro B Cells]  
SRP077875  Allele-Specific Non-CG Methylation Marks Domains of Active Chromatin in Mouse Brain [Brain (Prefrontal Cortex)]  
SRP077894  Single base resolution of the complete 5-mC and 5-hmC cardiac methylome in heart failure [Whole Heart]  
SRP078059  The de novo DNA methyltransferase DNMT3C protects male fertility from transposon activity (Bisulfite-seq). [10 Dpp Total Germ Cells]  
SRP078072  Derivation of ground-state female ESCs maintaining gamete-derived DNA methylation [ES Cells]  
SRP078328  Epigenetic restriction of embryonic and extraembryonic lineages mirrors the somatic transition to cancer (WGBS) [Extraembryonic Ectoderm, Inner Cell Mass, Precompacted 8 Cell Stage Embryos, Proximal Epiblast, Trophectoderm]  
SRP078445  DNA Methylation Divergence and Tissue Specialization in the Developing Mouse Placenta [Whole Placenta]  
SRP078848  Whole genome bisulfite and TAB-Sequencing from sorted neurons in the adult mouse brain [NeuN+ Neuronal Nuclei]  
SRP078871  Whole genome bisulfite sequencing of adult hypothalamus male mouse brain [Mixed Brain Cells]  
SRP078942  Cis-regulatory landscape of four cell types of the retina [Cones, Horizontal Cells, Rods, Starbust Amacrine Cells]  
SRP080866  DNA methyltransferase 3b regulates articular cartilage homeostasis by altering chondrocyte metabolism [Primary Articular Chondrocytes]  
SRP081004  Postnatal DNA demethylation and its role in tissue maturation [Hepatocyte]  
SRP081133  DNA methylation repels binding of hypoxia-inducible transcription factors to maintain tumour immunotolerance [WGBS] [Inner Cell Mass]  
SRP081312  DNA methylation regulates intron retention via altered MeCP2-mediated splicing factor recruitment [Granulocytes, Promyelocytes]  
SRP081475  Methylomes of wild-type and MeCP2 knockout brain cells [Whole Brain]  
SRP082360  Epigenetic memory of obesity in mouse colonic epithelium [Colon]  
SRP083753  LKB1 loss links the serine metabolic network to DNA methylation and tumourigenesis [bisulfite-seq] [Primary Pancreatic Ductal Epithelial Cells]  
SRP083895  Transcription and chromatin determinants of the rate of de novo DNA methylation in oocytes [60-65Um Oocytes]  
SRP089825  Enhanced Pluripotent Cell Function through miR-203-mediated Control of DNA Methylation [Ebs, iPs WT Long After DOX, iPs WT Short After DOX, iPs WT T=0, iPs miR-203 KI-N5 (T=0), iPs miR-203 KI-N5 Long After DOX, iPs miR-203 KI-N5 Short After DOX, iPs miR-203 KI-N9 (T=0), iPs miR-203 KI-N9 Long After DOX, iPs miR-203 KI-N9 Short After DOX]  
SRP089858  A novel requirement for Drosha in maintenance of mammalian CG methylation [Embryonic Stem Cells (ES Cells)]  
SRP090139  Analyzing whole genome bisulfite sequencing data from highly divergent genotypes [Liver]  
SRP090219  The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis [WGBS_Mm] [Derived iPSCs fMG02, Derived iPSCs fMG03, Embryonic Fibroblasts Cell, Embryonic Stem Cell, Immature Retinal-Derived iPSCs 8601, Mature Retinal-Derived iPSCs 3302, Mature Retinal-Derived iPSCs 7602, Retina]  
SRP090249  Whole Genome Bisulfite Sequencing in Pax7-reprogrammed corticotropes AtT-20 cells [Pituitary Corticotroph Cell]  
SRP090505  DNA methylation profiling of vascular maturation [Endothelial Cells]  
SRP090698  Epigenetic Memory Underlies Cell Autonomous Heterogeneous Behavior of Hematopoietic Stem Cells [LKS SLAM Cells]  
SRP090852  Vitamin C induced epigenomic remodeling in IDH1 mutant acute myeloid leukemia [HOXA9 Immortalized Bone Marrow]  
SRP091011  Tracking of dCas9-methyltransferase footprints [mESCs]  
SRP091938  Increased H3K9 methylation and impaired expression of Protocadherins are associated with the cognitive dysfunctions of the Kleefstra syndrome [Brain]  
SRP092244  Diverse interventions that extend mouse lifespan suppress shared age-associated epigenetic changes at critical gene regulatory regions (WGBS 1) [Hepatocytes]  
SRP092247  Diverse interventions that extend mouse lifespan suppress shared age-associated epigenetic changes at critical gene regulatory regions (WGBS 2) [Hepatocytes]  
SRP092540  WGBS assessment of global methylation alterations in hematopoietic stem and progenitor cells [methyl-seq] [Intermediate-Term Hematopoietic Stem Cell, Long-Term Hematopoietic Stem Cell, Multi-Potent Progenitor, Short-Term Hematopoeitic Stem Cell]  
SRP094653  ncRNA transcription-induced changes in nuclear architecture directs with high precision enhancer-promoter interaction [In-Vitro DN2 Cells]  
SRP095235  Dietary restriction protects from age-associated DNA methylation and induces epigenetic reprogramming of lipid metabolism [Liver]  
SRP095627  DNA methylomes at base resolution of mouse embryonic fibroblasts in G1 and G2 phase of cell cycle [Embryonic Fibroblasts (MEFs)]  
SRP097054  DNA methylation of SAMP8 and SAMR1 mice [Cerebral?Cortex]  
SRP097617  MLL2 conveys transcription-independent H3K4me3 in the oocyte [Germinal Vesicle Oocytes]  
SRP099007  Microglia isolated from juvenile offspring of dams with allergic asthma exhibit methylation and transcriptional alterations to autism risk genes [WGBS] [Acutely Isolated Microglia, P35 Brain]  
SRP099066  The BLUEPRINT Murine Lymphocyte Epigenome Reference Resource. [Whole Genome Bisulfite-Seq] [CD4+CD62L+ T Cells, CD43- B Cells]  
SRP099067  The BLUEPRINT Murine Lymphocyte Epigenome Reference Resource. [Whole Genome Bisulfite-Seq_OX] [From CD4+CD62L+ T Cells, From CD43- B Cells]  
SRP100972  5-hydroxymethylcytosine Accumulation in Postmitotic Neurons Results in Functional Demethylation of Expressed Genes [MethylC-Seq and oxBS-Seq] [Cerebellar Granule Cells]  
SRP101416  Whole-genome bisulfite-seq (WGBS) on Lin-Sca1+Kit+ (LSK) bone marrow cells from wild-type C57BL/6J mice [Lin-Sca1+Kit- Cells]  
SRP101453  Environmental enrichment increases transcriptional and epigenetic differentiation between mouse dorsal and ventral dentate gyrus neurons [Brain (Dentate Gyrus Of The Hippocampus)]  
SRP101591  Simultaneous mapping of active DNA demethylation and sister chromatid exchange in single cells [Around 100 Embryonic Stem Cells, E14]  
SRP101774  Isoform-specific localization of DNMT3A regulates DNA methylation fidelity at bivalent CpG islands [WGBS] [Embryonic Stem Cells]  
SRP103077  Mapping DNA methylation and CTCF/cohesin occupancy on nascent chromatin and DNMT-targeted nascent chromatin [Embryonic Stem Cells]  
SRP103763  Whole-genome analysis of 5-hydroxymethylcytosine and 5-methylcytosine at base resolution in the mouse brain [Cerebellum, Cortex, Olfactory Bulb]  
SRP105210  Loss of Dnmt3a Immortalizes Hematopoietic Stem Cells in vivo [WGBS] [Hematopoietic Stem Cells]  
SRP105270  Reprogramming of H3K9me3-dependent heterochromatin during mammalian early embryo development [WGBS] [4-Cell Embryo, 6.5 Day Embyo Epiblast, 6.5 Day Embyo Extraembryonic Ectoderm, 7.5 Day Embyo Epiblast, 7.5 Day Embyo Extraembryonic Ectoderm, 8-Cell Embryo, Early 2-Cell Embryo, Inner Cell Mass, Late 2-Cell Embryo, Morula Embro, Trophoblast, Zygote]  
SRP106356  Activation of Lineage-Regulators and Transposable Elements Across a Pluripotent Spectrum [2I – N2B27_BL6, 2i/LIF – GMEM/10% KSR_BL6, 2i/LIF – GMEM/10% Serum_129, 2i/LIF – N2B27_BL6, Ch/LIF – N2B27_BL6, Pd/LIF – N2B27_BL6, Serum/LIF -GMEM_129, Serum/LIF – Feeders - GMEM_BL6]  
SRP108295  De novo epigenetic programs inhibit PD-1 blockade-mediated T-cell rejuvenation [WGBS] [Antigen-specific CD8 T Cells, Naive CD8 T Cells]  
SRP108349  Enhancing the Potency of Mouse Embryonic Stem Cells [BS-Seq] [Embryonic Stem Cells]  
SRP108476  Whole genome bisulfite sequencing of Ing1/Gadd45a double knockout and wildtype mouse embryonic fibroblasts [Embryonic Fibroblasts (MEFs)]  
SRP109758  Cytosine methylation dynamics during spermatogenesis and post-testicular sperm maturation [Caput Sperm, Cauda Sperm, Corpus Sperm, Early Round Spermatids, Later Round Spermatids, Primary Spermatocytes, Vas Deferens Sperm]  
SRP109785  Paternal cold exposure enhances brown adipose tissue sensitivity in offspring and ameliorates diet induced obesity [Sperm]  
SRP109867  Base-resolution analysis of DNA methylation patterns downstream of Dnmt3a in mouse naïve B cells [Naive B Cells]  
SRP110902  DNMT3A haploinsufficiency predisposes hematopoietic cells to myeloid malignancies [Bone Marrow]  
SRP111167  DNA methylation dynamics during embryonic development and postnatal maturation of the auditory organ of Corti [Organ Of Corti]  
SRP111382  WGBS assessment of global methylation alterations in Dnmt3aKO or Dnmt3bKO mouse embryonic stem cells [Embryonic Stem Cells]  
SRP111384  rahu is a mutant allele of Dnmt3c, encoding a DNA methyltransferase homolog required for meiosis and transposon repression in the mouse male germline [WGBS] [Whole Testis]  
SRP111470  Whole genome bisulfite sequencing of mouse neural progenitor cells and neurons from the mouse cerebral cortex at day 15.5 of embryonic development [Cortical Neurons, Neural Progenitor Cells]  
SRP113186  Integrative Proteomic Profiling Reveals PRC2-Dependent Epigenetic Crosstalk Maintains Ground-State Pluripotency. [ESCs]  
SRP113409  Transcriptional and epigenetic profiling of aged mouse SVZ-derived neural stem / progenitor cells [SVZ-derived Neural Stem / Progenitor Cells]  
SRP113417  Chromatin and Transcriptional Dynamics in Adult Germline Stem Cells and Mammalian Spermatogenesis [Mature Sperm, Sperm, Spermatids, Spermatocytes, Spermatogonia, Spermatogonia (Thy1+)]  
SRP113606  Transient and permanent reconfiguration of chromatin and transcription factor occupancy drive reprogramming [Day12 MEF Reprogramming Intermediates, Day3 MEF Reprogramming Intermediates, Day6 MEF Reprogramming Intermediates, Day9 MEF Reprogramming Intermediates, MEF, MEF Derived Induced Pluripotent Stem Cells]  
SRP115607  A role of Polycomb in the maintenance of hypomethylation for DNA methylation valley [mESCs]  
SRP116373  Early-life gene expression in neurons modulates lasting epigenetic states. [Bisulfite-seq] [Cortex, Hippocampus]  
SRP116554  Snord116-dependent diurnal rhythm of DNA methylation in mouse cortex [Cerebral Cortex]  
SRP117079  Transcription factors drive Tet2-mediated enhancer demethylation to reprogram cell fate [Bisulfite-Seq] [Cultured Primary Cells (Short Term), Embryo (Inner Cell Mass), Low Passage (P<10)]  
SRP118911  High-Resolution Dissection of Conducive Somatic Cell Reprogramming to Naïve Ground State Pluripotency in Mbd3/NuRD and Gatad2a/NuRD Depleted Systems [WGBS] [Gatad2a-/- Cell Line, Mbd3f/- Cell Line, WT Cell Line]  
SRP119143  Transcriptomic and epigenomic analysis during conversion from mouse microglia into induced-neuronal (iN) cells [Microglial Cells]  
SRP119366  Long genes linked to autism harbor intragenic super-enhancer-like chromatin domains [Cortical Excitatory Neurons]  
SRP119705  DNA hypermethylation encroachment at CpG island borders in cancer is predisposed by H3K4 monomethylation [WGBS_Mm] [Blood (B Cell-Depleted), Spleen Bulk B Cells]  
SRP123210  Genetics, sex and life experience influence DNA methylation in the mouse [Liver]  
SRP123612  Novel Principles of Cellular Reprogramming Revealed by Prospective Isolation and Characterization of Rare Intermediates Poised to Generate iPSCs [WGBS] [MEF, Reprogramming Intermediate, iPSC]  
SRP125227  Next Generation Sequencing for Genome-wide Maps of DNA Methylaton in mES Cells [Embryonic Stem Cells]  
SRP125320  Effector CD8 T cells dedifferentiate into long-lived memory cells [Acute GP33-specific CD8 T Cells, Acute Memory Precursor P14 Cells, Acute Terminal Effector P14 Cells, P14 CD8 T Cells]  
SRP125421  Dynamic EBF1 occupancy directs sequential epigenetic and transcriptional events in B cell programming [Bisulfite-Seq-Cre] [Ebf1-deficient B Cell Progenitors]  
SRP125690  Forniceal deep brain stimulation induces gene expression and splicing changes that promote neurogenesis and synaptic plasticity [Dentate Gyrus]  
SRP126875  Differences in cell cycle status underlie transcriptional heterogeneity in the HSC compartment [HSC]  
SRP127685  Setd2 deficiency impairs hematopoietic stem cell self-renewal and causes malignant transformation [Bone Marrow LSK Cells]  
SRP127792  Single-cell dissection of long non-coding RNAs pivotal for embryonic hematopoietic stem cell development [T1 pre-HSC]  
SRP130993  SCNT embryos are defective for H3K27me3 imprinting [RNA-seq]  
SRP131922  Analysis of genetically diverse macrophages reveals local and domain-wide mechanisms that control transcription factor binding and function [Bone Marrow Derived Macropages (BMDM)]  
SRP132683  DNA (de)methylation in embryonic stem cells controls CTCF-dependent chromatin boundaries [Embryonic Stem Cells]  
SRP133323  Extensive recovery of embryonic enhancer and gene memory stored in hypomethylated enhancer DNA. [Embryonic Epithelial Cells, Intestinal Villus Cells]  
SRP133565  Genome-wide identification of distinct target loci for de novo DNA methylation by DNMT3A and DNMT3B during mammalian development [MEFs]  
SRP133698  Global DNA methylation remodeling during direct reprogramming from fibroblast to neuron [MethylC-seq] [Direct Reprogramming, Embryonic Fibroblast, Neural Progenitor Cells]  
SRP135700  Transcriptional and Epigenomic Landscapes of CNS and non-CNS Vascular Endothelial Cells [Vascular Endothelial Cells]  
SRP136257  Mammalian ISWI and SWI/SNF selectively mediate binding of distinct groups of transcription factors (Bis-seq data sets) [Embryonic Stem Cells]  
SRP136419  WGBS assessment of global methylation alterations in Dnmt3a1KO , Dnmt3a2KO, Dnmt3aKO, Tet1KO and DKO mouse embryonic stem cells [Embryonic Stem Cells]  
SRP136449  Comprehensive analysis of H3K9me2 oocytes, together with DNA methylation and expression analysis of G9a conditional KO oocytes and maternal KO preimplantation embryos [2-Cell Embryos, Blastocysts, Fully Grown Oocytes]  
SRP136786  Bisulfite-free direct detection of 5-methylcytosine and 5-hydroxymethylcytosine at base resolution [E14 Embryonic Stem Cells]  
SRP139083  DNA 5-methylcytosine specific profiling with limited input [ESCs]  
SRP139795  Transient reduction of DNA methylation at the onset of meiosis in male mice [Testis]  
SRP142028  Mus musculus Epigenomics [Embryonic Fibroblasts (MEFs)]  
SRP149052  Single-Cell RNA-Seq Reveals Dynamic Early Embryonic-like Programs during Chemical Reprogramming [CiPSCs, Intermediate Cells, XEN-like Cells]  
SRP151020  Inhibition of aberrant DNA re-methylation improves development of cloned embryos (WGBS-Seq) [Cumulus Cell, Embryonic Fibroblast Cell, Nuclear Transfer Embryo, Sertoli Cell]  
SRP151137  DNA methylation oscillations at CpG poor enhancers in primed embryonic stem cells [scRNA-Seq, scBS-Seq] [Embryo]  
SRP151590  Integrated Genomic Analysis of a Stem Cell Model of Overgrowth Syndrome with Intellectual Disability (WGBS) [J1 ESC, J1 NSC]  
SRP151725  Imprecise DNMT1 activity coupled with neighbor-guided correction enables robust yet flexible epigenetic inheritance [mESC, mESC-derived Cell]  
SRP154319  Effects of environmental enrichment on postnatal mouse cortex regulome [Homogenate]  
SRP154996  Epigenetic changes of the thioredoxin system in the tx-j mouse model and in patients with Wilson disease [Fetal Liver]  
SRP155404  A DNMT3A PWWP mutation leads to methylation of bivalent chromatin and postnatal growth retardation in mice [Epiblast, Hypothalamus, Liver]  
SRP156136  MethMotif: An integrative cell specific database of transcription factor binding motifs coupled with DNA methylation profiles [Colon, Spleen]  
SRP156779  DNA hypermethylation encroachment at CpG island borders in cancer is predisposed by H3K4 monomethylation [mESC_WGBS] [Embryonic Stem Cells]  
SRP158409  H3K36me2 recruits DNMT3A and shapes intergenic DNA methylation landscapes [C3H Embryo-Derived Mesenchymal Progenitor Cells]  
SRP158977  Methylome assays of E14.5 pancreatic progenitor cells [Endocrine Enrichment]  
SRP159191  Long-range epigenetic concordance revealed by simultaneous profiling of DNA methylation and chromosomal conformation changes in bulk and single cell Methyl-HiC [ESC Line]  
SRP159665  WGBS (Whole Genome Bisulfite Sequencing) of Wild-type and Math5-/- mouse dLGN (dorsolateral geniculate nucleus) at postnatal day 6 and postnatal day 23 [dLGN (Dorsolateral Geniculate Nucleus)]  
SRP160386  Perturbation of the OGT-TET1 interaction in mouse embryonic stem cells (WGBS) [Tet1 D2018A Mutant Knock In Stem Cells, Wild Type Stem Cells]  
SRP161525  True 5-methylcytosine profiling of late reprogramming stages during in vitro reprogramming of mouse embryonic fibroblasts (MEFs) to induced pluripotent stem cells (iPSCs) [Day 0 Embryonic Fibroblasts, Day 10 Totalx2 mCherry+/GFP+, Day 10 Totalx2 mCherry+/GFP-, Day 12 Naivex2 mCherry+/GFP+, Day 12 Naivex2 mCherry+/GFP-, Day 14 Naivex2 mCherry+/GFP+, TET1 KO iPSC Clonal Line, Experiment 1, TET1 KO iPSC Clonal Line, Experiment 2, Wild-Type iPSC Clonal Line, Experiment 1, Wild-Type iPSC Clonal Line, Experiment 2]  
SRP162035  Activin A and BMP4 Signaling Expands Potency of Mouse Embryonic Stem Cells in Serum Free Media [Embryonic Stem Cell, Epiblast Stem Cell]  
SRP162771  Characterization of the DNA methylome in retinal pigment epithelium (RPE) of adult mice [Retinal Pigment Epithelium (RPE)]  
SRP163215  Aging of mouse spermatogonial stem cells by Wnt7b-Jnk pathway activation [Bisulfite-seq] [Testis]  
SRP165997  Dynamic enhancer partitioning instructs Zdbf2 activation during epigenetic reprogramming [bisulfite-seq] [Epiblast-like Cell]  
SRP167689  WGBS in wild-type and MommeD1mut MEFs [MEFs]  
SRP167718  Next Generation Sequencing Combined Analysis of DNA Methylome and Transcriptome Reveal Novel Candidate Genes of Neuroprotective with Response to Ischemic Preconditioning [Brain]  
SRP168345  Characterization of the DNA methylome in murine Müller glia [Glast+ Cells]  
SRP168393  DNA methylation in AgRP neurons regulates voluntary exercise behaviour in mice [Neuron]  
SRP168427  Tet inactivation disrupts YY1 binding and long-range chromatin interactions to cause developmental defects in embryonic heart [Embryonic Heart]  
SRP170065  Differential roles of Stella in the modulation of DNA methylation during oocyte and zygotic development [Female Pronucleus, Male Pronucleus, Oocyte]  
SRP171165  Transcriptonal and epigenetic changes of adult liver cells in vivo and in vitro [Adult DDC Damaged Liver, Adult Healthy Liver]  
SRP172778  GR mutation in mice changes the genome-wide epigenome of frontal cortex in a highly sex-specific manner [Frontal Cortex]  
SRP173239  DNA methylation estimation using methylation-sensitive restriction enzyme bisulfite sequencing (MREBS) [Embryonic Fibroblasts, Embryonic Stem Cells]  
SRP173926  Loss of non-CpG methylation in inhibitory neurons impairs neural function through a mechanism that partially overlaps with Rett syndrome [Inhibitory Neurons]  
SRP174096  Endogenous retroviral insertions drive non-canonical imprinting in extra-embryonic tissues [Bisulfite-Seq] [Epiblast, Extra-embryonic Ectoderm]  
SRP174255  Effects of combined treatment of EGCG and environmental enrichment on postnatal mouse cortex regulome [Homogenate]  
SRP174491  FoxA-dependent demethylation of DNA initiates epigenetic memory of cellular identity [Hepatocytes]  
SRP174666  Super-enhancer subregions highly bound by the nuclear receptor ESRRB regulate the exit from naïve pluripotency [Epiblast Stem Cells (EpiSCs)]  
SRP174993  ChIP-seq and RNA-seq analysis of histone Kcr in the embryonic forebrain and neural stem/progenitor cells. [Forebrain]  
SRP176417  Single cell multi-omics analysis reveals novel roles for DNA methylation in sensory neuron injury responses [DRG Sensory Neuron]  
SRP178652  Branched-chain Amino Acid Aminotransferase-1 Regulates Self-Renewal and Pluripotency of Mouse Embryonic Stem Cells through Ras Signaling [mES]  
SRP183094  The intestinal microbiota programs DNA methylation to control tissue homeostasis and inflammation [BiSulfite-seq] [Colon Epithelial Cells]  
SRP184524  RNA m6A modification mediated by METTL3 is important for IAP heterochromatin integrity in mESCs (WGBS) [Embryonic Stem Cells]  
SRP185723  WGBS of WT and Smchd1-KO ES cells [Embryonic Stem Cells]  
SRP185738  Characterization of the DNA methylome in embryonic retina, retinal progenitors, and RGCs [Retina]  
SRP186631  Epigenetic signatures of chronic social stress in stress-susceptible animals [Nucleus Accumbens]  
SRP186642  Genome-wide methyl-cytosine competition by DNMT and TET [ESCs, Embryonic Stem Cell, EpiSCs, HUES64, HUES8, HUES8 Embryonic Stem Cells, In Vitro Derived Motor Neurons]  
SRP186720  Association Between Early Life DNA Methylation Patterns with Age-Related Transcriptional Changes [Hippocampus]  
SRP187205  Methylome profiling of GADD45 deficient mouse embryonic stem cells [Embryonic Stem Cells (mESC)]  
SRP188205  MeCP2 represses the rate of transcriptional initiation of highly methylated long genes (BS-Seq and OxBS-Seq) [Forebrain Tissue]  
SRP188734  Downregulation of Uhrf1 activity by TGF-ß signaling controls Foxp3 methylation and iTreg cell differentiation [CD4+ T Cells]  
SRP189864  Uncoupling histone H3K4 trimethylation from developmental gene expression via an epigenetic equilibrium of Polycomb, COMPASS and DNA methylation [Embryonic Stem Cell]  
SRP191868  Genome-wide analysis of DNA methylation profile in astrocytes isolated from naïve mice or EAE mice transduced with astrocyte-specific Mafg-targeting or non-targeting lentiviruses [WGBS] [Flow Cytometry Sorted Astrocytes]  
SRP192143  Setd2 deficiency impaired erythroid differentiation and accelerated Myelodysplastic Syndrome(MDS) - associated leukemogenesis through S100A8 and S100A9 [C-Kit+ Cells, Hematopoietic Stem And Progenitor Cells (HSPCs)]  
SRP193267  Allelic histone-to-DNA methylation switch establishes secondary DMR to maintain noncanonical imprinting [E6.5 Extraembryonic Ectoderm]  
SRP194541  Whole genome bisulfite genome analysis of OX40L-Jagged-1 expanded Treg and Teff cells [CD4+CD25-Teff Cells, CD4+CD25hi Treg Cells]  
SRP195507  Genome-wide roles of DNA methyltransferases in mouse embryos [Whole Embryos]  
SRP198282  Hammer-seq to measure kinetics of DNA methylation maintenance in HeLa cells [Embryonic Stem Cell, Epithelial Adenocarcinoma]  
SRP199205  Tox reinforces the phenotype and longevity of exhausted T-cells in chronic viral infection [Bisulfite-Seq] [P14 T-cells]  
SRP201955  Analysis of dendritic cell differences [Bone Marrow]  
SRP212622  Profiling of DNA Methylation during RANKL Induced Osteoclastogenesis using Whole-Genome Bisulfite Sequencing [Bone Marrow]  
SRP214596  Dnmt3a and Dnmt3b-mediated decommissioning of fetal enhancers linked to kidney disease [Kidney]  
SRP215028  Paradoxical association of TET loss of function with genome-wide hypomethylation [iNKT]  
SRP216390  Epigenetic and transcriptional changes in aging mouse rod photoreceptors [WGBS] [Rod Photoreceptors]  
SRP217940  Bivalent promoter hypermethylation in cancer is linked to the H327me3/H3K4me3 ratio in embryonic stem cells [ES Cells]  
SRP219391  Maternal exposure to a mitochondrial toxicant results in life-long alterations in DNA methylation and gene expression in the offspring [Liver]  
SRP221040  Embryonic stem cell-derived neurons as a model system for epigenome maturation during development [mESC Neural Diff 8 Days Induction]  
SRP221485  Epigenetic regulator function through mouse gastrulation [Extraembryonic Ectoderm, Proximal Epiblast]  
SRP222128  Genome-wide analysis of methylated DNA in control and Tet2/Tet3-deficient B cells [Primary B Cells]  
SRP222566  Whole genome bisulfite Sequencing data of four types mouse spermatogenesis [Differentiated Spermatogonia Cells, Pachytene Spermatocytes, Round Spermatids, Undifferentiated Spermatogonia Cells]  
SRP223436  Unique Transcription Factor Functions Regulate Epigenetic and Transcriptional Dynamics During Cardiac Reprogramming [alphaMHC-GFP+ Sorted Induced Cardiomyocytes, dsRed+ Sorted Fibroblasts (Control Infection)]  
SRP223513  G9a plays distinct roles in maintaining DNA methylation, retrotransposon silencing and chromatin looping [Embryonic Stem Cell]  
SRP227031  EED is required for Mouse Primordial Germ Cell Differentiation in the Embryonic Gonad [Primordial Germ Cells]  
SRP229336  DeepH&M: Simultaneous determination of single-CpG hydroxymethylation and methylation levels from enrichment and restriction enzyme sequencing methods [Cerebellum, Cortex]  
SRP229373  Novel Isoforms of the Epigenetic Regulator TET1 Differentially Control CNS Synaptic Function, Plasticity, and Cognition [Cultured Hippocampal Neurons]  
SRP229636  Inducible cell-specific mouse models for paired epigenetic and transcriptomic studies of microglia and astroglia: Whole Genome oxidative bisulfite sequencing data [Brain]  
SRP230210  Whole genome bisulfite sequencing (WGBS) of Tex15 wt, Tex15 ht, and Tex15 ko male germ cells at postnatal day 2.5 [Germ Cells]  
SRP230428  Tet2 negatively regulates memory fidelity [CA1 Hippocampal Tissue]  
SRP233665  The role of Vitamin C and TET dioxygenases in genome-wide features of regulatory T cells [WGBS] [Spleen And Lymph Nodes]  
SRP234410  Whole Genome Bisulfite Sequencing Facilitates Quantitative Analysis of DNA Methylation status in sperm from 2 month old and 18 month old mice [Sperm]  
SRP234989  Transcriptomic and epigenetic disruptions in excitatory neurons in Dnmt3a conditional knockout mouse [Excitatory Pyramidal Neurons]  
SRP237267  Maternal DNMT3A-dependent de novo methylation of the zygotic paternal genome inhibits gene expression in the early embryo [BB_androgenetic_blasto_DNAme, BD_2C_Dnmt3aMatKO_DNAme, BD_2C_Dnmt3aMatWT_DNAme]  
SRP239190  DNMTs Play an Important Role in Maintaining the Pluripotency of Leukemia Inhibitory Factor Dependent Embryonic Stem Cells [Embryonic Stem Cell]  
SRP239280  Structural basis of epigenetic protection of mouse lymphoid progenitor cells by Dnmt1 [Mouse WGBS] [Lin- Bone Marrow Progenitors]  
SRP239769  DNA methylome analysis of directly induced oocyte-like cells (DIOLs) [Embryonic Stem Cells, Fully-grown Directly Induced Oocyte-Like Cells, Non-growing Directly Induced Oocyte-Like Cells]  
SRP242576  Epigenetic changes in Langerhans islets preceding the onset of diabetes [Islet]  
SRP242612  Whole Genome Bisulfite Sequencing of CD4+ T cells from mice developmentally exposed to vehicle or TCDD prior to and during influenza infection [CD4+ T Cells]  
SRP244650  Paradoxical whole genome DNA methylation dynamics of Decitabine in chronic low-dose exposure in mice [Liver, Testes]  
SRP246238  Disturbed mitochondrial dynamics in CD8+ TIL reinforce epigenetic programming linked with T cell exhaustion  
SRP246664  Autocrine IL6 activates the STAT3-DNMT axis to silence the TNFa-RIP1 necroptosis pathway to sustain myeloid-derived suppressor cell survival and accumulation [CD11b+Gr1+]  
SRP246939  Beta cell-specific CD8+ T cells maintain stem-cell memory-associated epigenetic programs during type 1 diabetes (WGBS) [HAART HIV TN CD8 T Cells, Polyclonal Naive CD8 T Cell HD, Polyclonal T1D Naive CD8 T Cells, Polyclonal TCM CD8 T Cells, Polyclonal TEM CD8 T Cells, Polyclonal TSCM CD8 T Cells, Tetramer+ CD8 T Cells, Tetramer+ HAART CD8 T Cells, Tetramer+ T1D CD8 T Cells]  
SRP247347  TET2 promotes anti-tumor immunity by governing G-MDSCs and CD8+ T cell numbers  
SRP250290  A multivalent signal-transducing model for the DNMT1-mediated maintenance DNA methylation [ES Cells]  
SRP251304  Control of Foxp3 induction and maintenance by sequential histone acetylation and DNA demethylation [WGBS] [Wild-type CD4 Effector T Cells, Wild-type Naive CD4 T Cells, Wild-type Regulatory T Cells]  
SRP252412  WGBS and RNA-seq of mouse livers and human Hep3B cells [Liver]  
SRP254051  Post-implantation developmental defects induced by mtDNA mutation derive from altered DNA methylome in oocytes [D257A Treated Oocyte, Wild Type Oocyte]  
SRP254510  Mus musculus musculus strain:Bl6 Raw sequence reads [Enterocytes]  
SRP254904  DNMT3A haploinsufficiency results in behavioral deficits and global epigenomic dysregulation shared across neurodevelopment disorders [Bisulfite-Seq] [Cortex]  
SRP255391  NSD1-deposited H3K36me2 directs de novo methylation in the mouse male germline and counteracts Polycomb-associated silencing [E16.5 Prospermatogonia, P0 Prospermatogonia]  
SRP257580  Altered microRNA expression links IL6 and TNF-induced inflammaging with myeloid malignancy [miR146aKO_LSK_WGBS] [Bone Marrow]  
SRP257737  Role of E2F6 in gene expression and DNA methylation during mouse development [E8.5 Whole Embryos]  
SRP257778  Characterization of metabolic patterns in mouse oocytes during meiotic maturation [MII Oocytes]  
SRP258361  Transgenerational inheritance of obesity correlates with transmission of epigenetic alterations in the Fto gene [BS-seq] [Sperm]  
SRP258472  Neuronal activation modulates enhancer activity of genes for excitatory synaptogenesis through de novo DNA methylation [Cultured Hippocampal Neurons (10DIV)]  
SRP261467  Epigenetic and chromatin profiling of wild-type and Dnmt3a-deficient B1 and B2 B cells. (methylation) [B1, B2, proB1, proB2]  
SRP261529  An activity-mediated transition in transcription in early postnatal neurons [BS-seq] [Cortex]  
SRP265159  IGF2R-initiated Proton Rechanneling Dictates an Anti-inflammatory Property in Macrophages [Peritoneal Macrophages]  
SRP265261  Cyclosporin A and FGF signaling support the proliferation/survival of mouse primordial germ cell-like cells in vitro [bis-seq] [E9.5 PGC, ESC]  
SRP265512  Temporal evolution of cellular heterogeneity during the progression to advanced, AR-negative prostate cancer [RRBS] [Tumor]  
SRP266415  Flanking sequence preference modulates de novo DNA methylation in the mouse genome [Embryonic Stem Cells]  
SRP266608  Mouse preimplantation imprinting [WGBS] [Blastocyst, Embryonic Stem Cell, Kidney]  
SRP267895  Multiomics profiling of young and old quiescent skeletal muscle stem cells [aging WGBS] [Skeletal Muscle Stem Cells]  
SRP267967  Characterization of universal features of partially methylated domains across tissues and species [Breast Tumor, Lung]  
SRP270999  Hoxa10 is a functional positional memory that governs stem cell function in adult skeletal muscle [Masseter, Tibialis Anterior]  
SRP271091  Glucocorticoids sensitive progenitor PDGFRa+ cells switching to white adipocytes cause visceral obese via methylation modification of TEAD1 (Bisultite-seq) [Adipose Progenitors]  
SRP271469  Methylation and gene expression data obtained from Dnmt3b+/- peripheral T-cell lymphomas. [Lymph Node]  
SRP271532  Formative pluripotent stem cells show features of epiblast cells poised for gastrulation [MethylC_fPSCs_P10]  
SRP271992  Methylation and gene expression data obtained from Dnmt3b+/+, Dnmt3bD/D and Dnmt3bCI/CI MYC induced T-cell lymphomas (MTCLs). [Lymph Node]  
SRP272852  Epigenetic reprogramming of airway macrophages drives polarization and inflammation in muco-obstructive lung disease (WGBS_BL) [Airway Macrophages]  
SRP273163  Atg7-dependent autophagy regulates the naive to primed transition by selective Nanog degradation in mouse embryonic stem cells [WGBS] [E14TG2]  
SRP273620  Whole genome bisulfite sequencing of apoptotic and male-differentiated subpopulations of E13.5 wild-type murine male germ cells [Apoptosis-poised (AP) Germ Cell, Male-differentiated (MD) Germ Cell]  
SRP278195  Whole genome bisulfite sequencing analysis to measure the effect of EHMT2 (G9a, Bat8) on DNA methylation in the mouse embryo at 9.5 dpc [Embryo]  
SRP280273  Fetal origin of sex-bias brain aging [Fetal Brain, Placenta]  
SRP281855  YY1 safeguard multidimensional epigenetic landscape associated with extended pluripotency [EPS Cells]  
SRP282002  Sperm epigenetic alterations contribute to inter- and transgenerational effects of paternal exposure to long-term psychological stress via evading offspring embryonic reprogramming [Embryo, Sperm]  
SRP282126  MicroRNA-29 is an essential regulator of non-CG methylation during brain maturation [Bisulfite-seq] [Cortex]  
SRP283863  Foxp3 enhancers synergize to maximize regulatory T cell suppressive capacity [Bisulfite-Seq] [FACS Sorted Regulatory T Cells (CD4+GFP+)]  
SRP285138  Dnmt1 has global de novo methylation activity and is specifically targeted to transposable elements [E3.5 Blastocyst, E6.5 Epiblast, mESC]  
SRP285604  Muscle regeneration controlled by a designated DNA dioxygenase (Methylation-Seq) [Satellite Cells Derived Myoblasts]  
SRP286191  Genome-wide maps of Dnmt1-dependent DNA methylome in adipocytes [Adipocytes]  
SRP286409  H3K27me3 shapes DNA methylome by inhibiting UHRF1-mediated H3 ubiquitination [Bisulfite-seq] [E14, HeLa]  
SRP288034  DNA methylomes of murine B and T cells from the BLUEPRINT Epigenome project [CD4+CD62L+ T Cells, CD43- B Cells]  
SRP288067  Epigenomic profiles of 4T1 cell line in primary, metastasis site and circulating cell type in xenograft mouse model [Circulating Tumor Cell, Fat Pad Xenograft, Lung Metastasis, Mammary Gland]  
SRP289001  Depletion of H3K36me2 recapitulates epigenomic and phenotypic changes induced by the H3.3K36M oncohistone mutation [Fibroblast]  
SRP289560  Whole-genome bisulfite sequencing analysis of Pten's function in regulating cardiomyocyte differentiation [ES-derived Cardiomyocytes]  
SRP291181  Transgenerational inheritance of epigenetic signatures at CpG islands in mice [ESC]  
SRP291379  Dnmt3a deficiency in the skin [Skin]  
SRP292265  Cell type-specific transcriptomic and eipgenome analysis of diabetic cardiomyopathy [Cardiac Myocyte, Endothelial Cell, Fibroblast, Macrophage]  
SRP292587  TET deficiency promotes oncogenesis and DNA damage in B cells by increasing the levels of G-quadruplexes and R-loops [WGBS] [B Cells]  
SRP292755  KMT2C Loss Promotes Small Cell Lung Cancer Metastasis through DNMT3A-mediated Epigenetic Reprogramming [Liver, Lung]  
SRP292910  The effect of NEIL3 on CA1 DNA methylation [Brain]  
SRP294136  Unraveling the functional role of DNA demethylation at specific promoters by targeted steric blockage of DNA methyltansferase with CRISPR/dCas9 [NIH-3T3]  
SRP296451  WGBS on prospermatogonia at E18.5  
SRP297323  Base-editor-mediated multiplexed inactivation of DNA methyltransferases reveals essential roles of miRNAs in mouse gastrulation [Epiblast, Extraembryonic Ectoderm, Whole Embryo]  
SRP297921  Transcriptional and epigenomic profiling identifies YAP signaling as a key regulator of intestinal epithelium maturation [II] [Small Intestinal Epithelium Derived Organoids]  
SRP299927  Methylomes of macrophage-DC progenitors (MDPs), monocytes, common monocyte progenitors (cMoPs), common dendritic cell progenitors (CDPs), plasmacytoid dendritic cells (pDCs), and cDC CD8a+ as well as cDC CD11b+ dendritic cells [CDPs, MDPs, Monocytes, cDC CD11b+, cDC CD8a+, cMoPs, pDCs]  
SRP300044  Genome-wide maps of DNA methylome during oocyte aging and its transgenerational inheritance [Hippocampus, M2 Oocyte, Sperm]  
SRP300086  PDGFRa+ not CD137+ progenitors control visceral obesity via glucocorticoid mediated TEAD1 methylation state [Adipose Progenitors]  
SRP300442  Disordered N-Terminal DNMT3A Domain Is Required for Mouse Postnatal Development [Cerebral Cortex, Cortical Neuron Nuclei]  
SRP301916  Constitutive loss of DNMT3A causes morbid obesity through misregulation of adipogenesis [Adipose]  
SRP302177  Whole genome bisulfite sequencing of E13.0 and E13.5 Tex14 mutant, heterozygote and wild-type murine female germ cells [Germ Cell]  
SRP302195  Whole genome bisulfite sequencing of sstr2 knockout mice [Gastric Tissue]  
SRP302337  ZFP57 dictates allelic expression switch of target imprinted genes [Total Embryo]  
SRP305480  5-hydroxymethylcytosine is required for terminal differentiation of Purkinje neurons [Purkinje Cells]  
SRP307526  DNA methylation regulates haematopoietic development [AGM, Bone Marrow, Fetal Liver]  
SRP308565  Methylomes of young and aged LT-HSCs [Primary Hematopoietic Stem Cells]  
SRP308731  Loss of SETD1B results in the redistribution of genomic H3K4me3 in the oocyte [PBAT] [Germinal Vesicle Oocytes]  
SRP309189  Genome-wide methylation analysis of murine innate lymphoid cells [Innate Lymphoid Cells]  
SRP309253  In Vitro Reconstitution of the Whole Male Germ-Cell Development from Mouse Pluripotent Stem Cells [PBAT] [Germ Cells Derived]  
SRP309373  RNA-seq, ATAC-seq, WGBS, and CUT&RUN of urothelial cells isolated from Naive, Resolved, and Sensitized C3H/HeN mice [Urothelial Stem Cells (USCs)]  
SRP309644  DNMT3B supports meso-endoderm differentiation from mouse embryonic stem cells [WGBS] [ES-E14, ES-E14 Derived EpiSC, EpiLC-derived ME]  
SRP309709  Epigenetic integrity of paternal imprints enhances the developmental potential of androgenetic haploid embryonic stem cells [Haploid mESCs]  
SRP310260  Mouse totipotent stem cells captured and maintained through spliceosomal repression [mESC Cultured In SLP Medium, mESC Cultured In Serum/Lif Medium]  
SRP310416  Dnmt3a-Mutant Hematopoietic Stem cells are resistant to inflammatory stress [Donor Derived CD45.2 Cells]  
SRP311975  A cis-acting mechanism mediates trancriptional memory at Polycomb target genes in mammals [WGBS] [C-Myc-Immortalized Embryonic Fibroblasts]  
SRP312013  Maintenance DNA methylation in pre-meiotic germ cells regulates meiotic prophase by facilitating homologous chromosome pairing [Male Germ Cells]  
SRP312491  Placenta and fetal brain share a neurodevelopmental disorder DNA methylation profile in a mouse model of prenatal PCB exposure [WGBS] [Brain, Placenta]  
SRP312798  Diverse epigenetic mechanisms maintain parental imprints within the embryonic and extraembryonic lineages [ExE (Extraembryonic Ectoderm)]  
SRP313361  Whole Genome Bisulfite Sequencing of miR-143 knock-out mice liver [MIGS Eukaryotic Sample From]  
SRP313387  Regnase-1 suppresses TCF-1+ precursor exhausted T cell formation to limit CAR T cell responses against ALL [WGBS] [Regnase-1-deficient CAR T, WT CAR T]  
SRP313733  Whole genome bisulfite sequencing of young and old satellite cells [Primary Myoblasts]  
SRP314467  Postnatal expansion of the lymph node stromal cell pool towards reticular and CD34+ stromal cell subsets [WGBS] [Gut-Draining Mesenteric Lymph Node, Skin-Draining Mesenteric Lymph Node]  
SRP315002  Functional and epigenetic phenotypes of humans and mice with DNMT3A overgrowth syndrome [Whole_Bone_Marrow]  
SRP318894  RNA-seq, WGBS, 5hmC-Seal, and ATAC-seq data about TET proteins and skeletal development (WGBS) [Primary Osteoblasts]  
SRP319090  Whole genome bisulfite sequencing analysis to examine the effect of the iron chelator deferoxamine on DNA methylation levels in 3T3-L1 pre-adipocyte cells [Preadipocyte Cell Line]  
SRP319425  Whole-genome bisulfite sequencing anlaysis of in vitro fertilized mouse hybrid blastocysts [Blastocyst]  
SRP321573  Conservation and divergence of DNA methylation patterns and functions in vertebrates [Primary Dermal Fibroblasts, Psoas Muscle]  
SRP321876  Genetic variation at mouse and human ribosomal DNA influences associated epigenetic states [Blood, Kidney]  
SRP322748  Club cells employ regeneration mechanisms during lung tumorigenesis [Lung]  
SRP323244  Tet enzymes are required for mammalian embryonic hematopoiesis [Endothelial Cell, Hematopoietic Stem And Progenitor Cell]  
SRP325428  Systematic profiling of DNMT3A variants reveals protein instability mediated by the DCAF8 E3 ubiquitin ligase adaptor [Embryonic Stem Cells, Lymphoblastoid Cell Line]  
SRP327113  DNA methylation changes of heart tissue in mouse with alcoholic cardiomyopathy [Heart]  
SRP329327  HypoSUMOylation in embryonic stem cells generates head-and-trunk embryo-like structure [Methyl-seq] [ES Cells]  
SRP329752  Whole genome bisulfite sequencing (WGBS) analysis of murine splenic DC subtypes [Not Applicable]  
SRP329853  Mouse methylome and transcriptome of three brain tissues in aging [Hippocampus, Striatum, Substantia Nigra]  
SRP331841  DNA Methylation Status in Mouse Liver Affected by Maternal High-fat, High-sucrose diet [Liver]  
SRP336016  Salt induces hepatic inflammatory response through epigenetic modulation of SIRT3 [Bisulfite-seq] [Liver]  
SRP336168  Tet2 deficiency altered hematopoietic stem and progenitor cells ageing process [LSK]  
SRP336573  Perturbation of TET2 condensation induces genome-wide promiscuous DNA hypomethylation and curtails leukemia cell growth [Embryonic Stem Cells (mESCs), Leukemia Cell Line]  
SRP336725  Histone H3K36me2 and H3K36me3 form a chromatin platform essential for DNMT3A-dependent DNA methylation in mouse oocytes [Oocyte]  
SRP336812  Differential regulation of mouse hippocampal gene expression sex differences by chromosomal content and gonadal sex: Whole Genome OXBS-Seq Data [Hippocampus]  
SRP337056  The DNMT1 inhibitor GSK-3484862 mediates global demethylation in murine embryonic stem cells [Undifferentiated Embryonic Stem Cells]  
SRP337411  Examining age-dependent DNA methylation patterns and gene expression in the male and female mouse hippocampus [Dorsal Hippocampus]  
SRP339235  9sCa: MSL2 is an allelic dosage sensor in mammals [Neural Progenitor Cells]  
SRP339236  BlCa: MSL2 is an allelic dosage sensor in mammals [Neural Progenitor Cells]  
SRP339237  CaBl: MSL2 is an allelic dosage sensor in mammals [Neural Progenitor Cells]  
SRP339793  Somatic Dnmt3a deletion in murine hematopoietic cells [B-cells, CMP, GMP, Lineage Negative Kit Positive Sca1 Positive, MEP, Myeloid Cells, T-cells, Whole Bone Marrow]  
SRP340739  Loss of TET reprograms Wnt signaling through impaired demethylation to promote lung cancer development [Lung]  
SRP341070  Promoter repression and 3D-restructuring resolves divergent developmental gene expression in TADs [WGBS] [ESC, Limb]  
SRP342398  Next Generation Sequencing Facilitates Quantitative Analysis of ApoE-/-/SAHHWT, ApoE-/-/SAHH+/- mice and ApoE-/-/SAHH+/- +Betaine mice [WGBS] [Vascular]  
SRP342541  Maternal SMCHD1 controls both imprinted Xist expression and imprinted X chromosome inactivation [Embryo]  
SRP342588  Whole genome bisulfite sequencing of 3T3-L1 preadipocytes and adipocytes [Embryo]  
SRP342595  Dynamics of DNA hydroxymethylation and methylation during mouse embryonic and germline development [IVC Epiblast]  
SRP342917  Rat and mouse imprintomes (allele-specific DNA methylomes) [EPC, Epiblast]  
SRP342995  H3K36 Dimethylation Shapes the Epigenetic Interaction Landscape by Directing Repressive Chromatin Modifications in Embryonic Stem Cells  
SRP348783  Sex-specific epigenetic development in the mouse hypothalamic arcuate nucleus pinpoints human genomic regions associated with body mass index [Glia, Neuron]  
SRP349681  The distinct effects of MEK and GSK3 inhibition upon the DNA methylome and transcriptome of mouse embryonic stem cells [Embryonic Stem Cells]  
SRP350023  Vitamin C deficiency causes cell type-specific epigenetic reprogramming and acute tubular necrosis [Kidney]  
SRP350997  GLP is critical for oogenesis exhibiting a G9A-independent role in transcriptional repression [Oocyte]  
SRP351062  Whole genome DNA methylation profiling of mouse nucleus accumbens Drd2 medium spiny neurons by using two independent library preparation methods [D2-MSN]  
SRP351503  Cell-type specific DNA methylome signatures reveal epigenetic mechanisms for neuronal diversity and neurodevelopmental disorder [GABAergic Neurons, Glutamatergic Neurons, Purkinje Neurons]  
SRP353039  WGBS of control and DAC-treated CT26 cells. [CRC Cell Line CT26]  
SRP353283  Cancer stem cells, not bulk tumor cells, determine mechanisms of resistance to SMO inhibitors [Not Applicable]  
SRP354658  Global DNA methylation analysis of cancer-associated fibroblasts reveals extensive epigenetic rewiring linked with RUNX1 upregulation in breast cancer stroma [WGBS] [Non-immune Stromal Cells]  
SRP355808  Somatic Dnmt3a deletion in murine hematopoietic cells [B-cells, CMP, GMP, KLS, MEP, Myeloid, T-cells, WBM]  
SRP355886  Whole-genome bisulfite sequencing (WGBS) of stressed and nonstressed breast tumor in mice [Breast Tumor]  
SRP356163  PU.1-dependent enhancer inhibition separates clonal hematopoiesis from malignant transformation (oxBS-Seq) [cKit+ Lymph- Ery- HSPC]  
SRP357383  DNA methylation landscape and transcriptome of tumor-associated macrophages reveals pathways, transcription factors, and prognostic value relevant for breast cancer patients [methylation] [Bone Marrow-Derived Monocytes, Mammary Gland Macrophages, Tumor-associated Macrophages]  
SRP359332  Donor T-cell DNMT3a regulates alloreactivity in murine models of hematopoietic stem cell transplantation [WGBS] [Sorted Splenic Donor T-cells]  
SRP360183  Whole genome bisulfite sequencing of WT and Dnmt3a KO HSCs following chronic infection [Hematpoietic Stem Cells]  
SRP360425  Role of Dppa3 during primordial germ cell development I [Primordial Germ Cell (PGC)]  
SRP361168  Suppression of colorectal cancer by ketogenic diet and beta-hydroxybutyrate (Bisulfite Sequencing Dataset) [Colon]  
SRP362787  Genome-wide bisulfite sequencing (GWBS) and RNA-seq in hippocampus of Neil1- and Neil2 deficient mice [Hippocampus]  
SRP363476  Dynamic antagonism between key repressive pathways maintains the placental epigenome (WGBS) [Trophoblast Stem Cells]  
SRP363630  Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet [mESC]  
SRP364004  Transcriptional regulation of the thymus master regulator Foxn1 [WGBS] [Thymus Epithelial Cell Type 1, Thymus Epithelial Cell Type 2, Thymus Epithelial Cell Type 3, Thymus Epithelial Cell Type 4, Type II Airway Epithelial Cells]  
SRP366957  Single substitution in H3.3G34 alters DNMT3A recruitment to cause progressive neurodegeneration [WGBS] [Cortex]  
SRP367185  Spatial organization of H3K9me2/3-marked heterochromatin is redundantly maintained by either the H3K9 or H3K27 methylation pathway [MethylC-seq] [iMEFs]  
SRP367537  Whole-genome bisulfite sequencing of Dnmt1/3a/3b triple knockout (TKO) embryonic stem cells with or without expression of exogenous Dnmt1 before and after cell differentiation [Embryonic Stem Cells]  
SRP367683  TET2 and TET3 loss disrupts small intestine differentiation and homeostasis [Bisulfite-seq] [Small Intestine]  
SRP367742  HIV Tat and cocaine interactively alter genome-wide DNA methylation and gene expression and exacerbate learning and memory impairments [Bisulfite-seq] [Brain Hippocampus]  
SRP367910  Inflammatory exposure drives permanent impairment of hematopoietic stem cell self-renewal activity and accelerated aging  
SRP368317  Genome-wide methylation analysis of murine CD4+ Th1, Th2, and Th17 cells [CD4+ Memory T Cell]  
SRP370019  Disturbance on DNA methylation and gene expression levels of mouse plasma leukocytes by low-dose ionizing radiation [Plasma Leukocyte]  
SRP371705  MethylC-Seq: Intestinal stem cell aging signature reveals a reprogramming strategy to enhance regenerative potential [Intestinal Stem Cell (ISC)]  
SRP371845  Raw WGBS reads of mice zygotes [Oocyte, Sperm, Zygotes]  
SRP372616  Global DNA methylation analysis of mouse totipotent potential stem cells, extended pluripotent stem cells and mouse embryonic stem cells [Embryonic Stem Cells, Extended Pluripotent Stem Cells, Totipotent Potential Stem Cells]  
SRP373182  TRIM28 establishes skeletal stem cell identity and safeguards skeletogenesis (WGBS) [Rib Caritilage Cells]  
SRP375715  Role of Dppa3 during primordial germ cell development II [Fully Grown Oocyte (FGO)]  
SRP376172  DNA sequence determines epigenetic bistability at imprinting control regions [WGBS] [Embryonic Stem Cells]  
SRP376633  H3K36 methylation maintains cell identity by regulating opposing lineage programs [Reprogramming Intermediate]  
SRP376940  Temporally-Divergent Regulatory Mechanisms Govern Neuronal Diversification and Maturation in the Neocortex [WGBS] [Somatosensory Cortex And Motor Cortex]  
SRP377658  Genome-wide assessment of DNA methylation alterations induced by superovulation, sexual immaturity and in vitro follicle growth in mouse blastocysts [Blastocyst]  
SRP378380  WGBS data of enhanced addictive bahavior in male offspring [Brain-Nucleus Accumbens]  
SRP379742  The intrinsic and extrinsic effects of Tet proteins during gastrulation [Sorted Ctrl1 Cells, Sorted Ctrl2 Cells, Sorted TKO1 Cells, Sorted TKO2 Cells]  
SRP381882  In vivo loss of TET2 and TET2 results in aberrant differentiation and homeostasis in the small intestine [Colon Epithelial Cells]  
SRP384348  Evidence that direct inhibition of transcription factor binding is the prevailing mode of gene and repeat repression by DNA methylation [WGBS-Seq] [Ebryonic Stem Cells, Embryonic Kidney Cells, Ngn2_neurons]  
SRP387245  Differences in DNA methylation of HAMP in blood cells predicts the development of type 2 diabetes [WGBS] [Liver]  
SRP388596  Decitabine-induced T cell remodeling facilitates a high antitumor response to PD-1 blockade therapy by promoting the expansion and effector function of CD8+ progenitor exhausted T cells [CD8+ T Cells]  
SRP388748  Transcriptional and epigenetic reprogramming mediated by chronic IL1ß exposure drives self-renewal ability and myeloid priming in TET2 deficient stem and progenitor cells [Bisulfite-Seq] [Common Myeloid Progenitor, Granulocyte-Macrophage Progenitor, LSK Progenitor Cell]  
SRP393350  Whole genome enzymatic methyl-seq of A20 mouse cells using a novel TETact activation of CD4 [A20 B Cell Lymphoma Cell Line]  
SRP393405  scNMT-seq of the adult NSC lineage - MAB-seq [Adult Neural Stem Cells And Astrocytes, Neuroblasts, Oligodendrocytes]  
SRP395725  Tet2 and Tet3 mediated active cytosine hydroxymethylation in Six2 progenitor cells is critical for nephron progenitor differentiation and nephron endowment [Nephron Progenitor]  
SRP395892  DNA dioxygenases Tet2/3 control epithelial differentiation (bisulfite-seq) [Hair Matrix Keratinocytes]  
SRP396119  NSD1 deposits Histone H3 lysine 36 dimethylation to pattern non-CG DNA methylation in neurons [WGBS in vitro] [Cultured Cortical Neurons]  
SRP396130  NSD1 deposits Histone H3 lysine 36 dimethylation to pattern non-CG DNA methylation in neurons [WGBS in vivo] [Cerebral Cortex]  
SRP396513  Rockfish: Detection of 5mC DNA Modifications Using Raw Nanopore Signal [Embryonic Stem Cell, Purified Cardiomyocyte]  
SRP397149  Basal cell extrusion primes pluripotent cells for differentiation [Embryo, Pluripotent Stem Cells]  
SRP397538  Tet2 regulates Sin3a recruitment at active enhancers in embryonic stem cells [Embryonic Stem Cells]  
SRP398423  TET2 lesions enhance the aggressiveness of CEBPA-mutant AML by rebalancing GATA2 expression [WGBS] [AML Blasts]  
SRP398560  Whole-genome bisulfite sequencing and histone 3.3 ChIP-seq of microdissected developing mouse lens [Embryonic Lens Epithelium, Embryonic Lens Fiber]  
SRP398698  Prenatal exposure to benzo[a]pyrene depletes ovarian reserve and masculinizes embryonic ovarian germ cell transcriptome transgenerationally II [Primordial Germ Cell]  
SRP398703  Prenatal exposure to benzo[a]pyrene depletes ovarian reserve and masculinizes embryonic ovarian germ cell transcriptome transgenerationally I [Primordial Germ Cell]  
SRP399252  p16 epimutation modulates the tumor microenvironment and promotes malignancy of Apc-mutant colon cancer [Embryonic Fibroblast]  
SRP399723  Zmym2 is essential for methylation of germline genes and active transposons in embryogenesis [WGBS-seq] [Whole Embryo]  
SRP400264  WGBS WT J1 ESC at D3 of EpiLC differentiation [Embryonic Stem Cells]  
SRP400320  Whole genome bisulfite sequencing (WGBS) and RNA-sequencing of preadipocytes from iWAT [Preadipocytes (CD45-, CD31-, TER119-, PDGFRa+)]  
SRP400331  DNA methyltransferase inhibition induces dynamic gene expression changes in lung CD4+ T cells of neonatal mice with E. coli pneumonia [RRBS] [CD4+ T Cell]  
SRP401089  Dual gene activating and repressive functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation [oxWGBS] [CM59, CM69, KO1, KO15, WT34, WT7, WT70, WT72]  
SRP403116  Precision pharmacological reversal of strain-specific diet-induced metabolic syndrome in mice informed by epigenetic and transcriptional regulation [Liver]  
SRP404930  LN-stem, tumor stem, tumor terminally differentiated CD8 T cells from human kidney cancer [CD8 T Cell, Endo CD8 T Cell, P14 CD8 T Cell]  
SRP405758  Comparative analysis of epigenomic evolution in mammals [Liver, Skeleton Muscle]  
SRP405928  Optimized bisulfite sequencing reveals the lack of 5-methylcytosine in mammalian mitochondrial DNA [WGBS] [Brain, Breast Cancer Cell, Embryonic Kidney Cell, Embryonic Stem Cell, Hepatocarcinoma Cell, Lung Adenocarcinoma Cell, Melanoma Cell, Neuroblastoma Cell, Platelet]  
SRP407097  Sex Chromosomes and Sex Phenotype Contribute to Biased DNA Methylation in Mouse Liver [Liver]  
SRP410496  Whole genome bisulfite sequencing and Infinium Mouse Methylation BeadChip using fresh and fresh-frozen mouse epidermis (WGBS) [Epidermis]  
SRP412252  Epigenetic changes in food induced anaphylaxis animal model after immunotherapy. [Dendritic Cells]  
SRP413488  Methylation state of latent and proliferative metastatic tumor cells [Breast Cancer]  
SRP414189  TET activity propagates transcriptional memory through embryonic dormancy [WGBS] [Embryonic Stem Cell]  
SRP417057  Whole-genome bisulfite sequencing analysis for intestinal budding organoids derived from induced or tissue-derived intestinal stem cells, and for mouse embryonic fibroblasts [Embryonic Fibroblast (MEF), Intestinal Stem Cell (ISC)]  
SRP417480  Inducible disruption of Tet genes results in myeloid malignancy, readthrough transcription, and a heterochromatin-to-euchromatin switch [WGBS] [CD11b+]  
SRP418871  Dynamic DNA methylation turnover at the exit of pluripotency epigenetically primes gene regulatory elements for hematopoietic lineage specification [WGBS] [ESC, EpiLC]  
SRP421061  DNA methylation in the mouse cochlea promotes maturation of supporting cells and contributes to the failure of hair cell regeneration [Inner Ear Cochlea]  
SRP422554  Predicting age in single cells and low coverage DNA methylation data [scBS] [Whole Blood Depleted Of Red Blood Cells]  
SRP422816  Distinct disease mutations in DNMT3A result in a spectrum of behavioral, epigenetic, and transcriptional disruptions [Cortex]  
SRP423445  Ultrafast Bisulfite Sequencing for Efficient and Accurate 5-Methylcytosine Detection in DNA and RNA [Plasma, Stem Cell, mESC]  
SRP424820  Durable and efficient gene silencing in vivo by hit-and-run epigenome editing [WGMS] [Hepatocyte]  
SRP425083  T regulatory cells epigenetic changes in food induced anaphylaxis animal model after immunotherapy. [T Regulatory Cells]  
SRP425335  Epigenetic evolution of the Ly49 gene family [Bisulfite-Seq] [Natural Killer Cells]  
SRP426653  Stem Cell Activity-Coupled Suppression of Endogenous Retrovirus Governs Adult Tissue Regeneration [WGBS] [Anagen Hair Follicle Cells]  
SRP431160  Whole genome bisulfite-seq analysis of control and Dnmt3a conditional knockout (cKO) retinal ganglion cells at 2 days post optic nerve crush [Retinal Ganglion Cell]  
SRP431846  Histone methylation mediated by NSD1 is required for the establishment and maintenance of neuronal identities [WGBS] [Somatosensory Cortex]  
SRP432324  Macrophage recipient WGBS data: Donors infected with Porphyromonas gingivali (WDPg) or sham-infected (WD) and fed a western diet (WD) [Elicited Macrophages]  
SRP433931  Prenatal exposure to benzo[a]pyrene depletes ovarian reserve and masculinizes embryonic ovarian germ cell transcriptome transgenerationally [Bisulfite-Seq] [Primordial Germ Cell]  
SRP435424  Genome-wide methylated CpG status in WT and IRF8KO microglia [WGBS] [FACS-sorted Microglia]  
SRP435461  Cell-specific and shared regulatory elements control a multi-gene locus active in mammary and salivary glands [Bisulfite-seq] [Liver, Mammary Gland]  
SRP440315  Transcriptomic and methylomic analyses of liver tissue in nonalcoholic steatohepatitis [Bisulfite-Seq] [Liver]  
SRP441169  HDAC6 deacetylates IDH1 to regulate the homeostasis of hematopoietic stem/progenitor cells [WGBS-seq] [Hematopoietic Stem/Progenitor Cells (LSK)]  
SRP447137  Single cell methylation, RNA, and ATAC sequencing of brain tissue in inbred mouse strains [Brain]  
SRP447781  GEO accession GSE236722 is currently private and is scheduled to be released on Jul 06, 2025. [LUAD, Melanoma]  
SRP450385  Catalytic dependent and independent roles of Tet3 in activation of ectodermal and silencing of mesodermal programs during neuroectoderm specification [Neuroectoderm Cells]  
SRP451433  Combinational effect of the ADD domains of DNMT3A and DNMT3L on DNA methylation landscapes in mouse germ cells [WGBS] [Fully Grown Oocyte, Sperm]  
SRP454736  Sperm DNA methylation defects in a new mouse model of the 5,10-methylenetetrahydrofolate reductase 677C>T variant and correction with moderate dose folic acid supplementation. [Sperm]  
SRP455338  Durable and efficient gene silencing in vivo by hit-and-run epigenome editing [WGMS_invitro_revision] [Hepatocyte]  
SRP456835  DNMT3A Addback [Bone Marrow]  
SRP458075  DNA methylation shapes the Polycomb landscape during the transition from naïve-to-primed pluripotency [Embryonic Stem Cells]  
SRP460843  Whole genome bisulfite sequencing (WGBS) of intestinal organoids from mice with graft-versus-host disease [Intestinal Organoids]  
SRP461642  Whole genome bisulfite sequencing identifies stage- and subtype-specific DNA methylation signatures in pancreatic cancer [Normal Pancreatic Ductal Organoid, PanIN Organoid, Pancreatic Ductal Adenocarcinoma Organoid]  
SRP462875  Mus musculus Genome sequencing and assembly [Liver]  
SRP462989  Spatio-temporal X-linked gene reactivation in the mouse germline reveals site-specific retention of epigenetic silencing [WGBS] [Embryo]  
SRP463129  Genome-wide DNA methylation pattern changes in ESC, and EPSC after treated with T09 [EPSC, EPSC With T09, ESC, NrESC]  
SRP464133  Increased global DNA methylation disrupts skeletal muscle homeostasis, promotes age-related decline in muscle function, and reduces muscle plasticity [Skeletal Muscle, Iibialis Anterior]  
SRP466337  Astrocyte-produced HB-EGF limits autoimmune CNS pathology [WGBS] [FACS-sorted Astrocyte]  
SRP469813  Whole Genome Bisulphite Sequencing of undifferentiated and differentiated NIH3T3L1 [Fibroblast]  
SRP471571  Histone methyltransferase SETDB1 silenced SINE B2 retrotransposons and maintained mitotic cell cycle of neural progenitor cells (WGBS) [Neural Progenitor Cells]  
SRP472167  FoxA1/2-dependent epigenomic reprogramming drives lineage switching in lung adenocarcinoma [Bisulfite-Seq] [Lung, Lung Tumors]  
SRP473050  Source cell-type epigenetic memory persists in induced pluripotent cells but is lost in subsequently derived germline cells [Embryonic Fibroblasts, Embryonic Stem Cells, Induced Pluripotent Stem Cells, Primordial Germ Cell Like Cells, Primordial Germ Cells, Spermatogonial Stem Cells, Tail Tip Fibroblasts]  
SRP473623  Mus musculus strain:C57Bl/6J Raw sequence reads [Placenta, Primordial Germ Cells]  
SRP474495  Landscape of TFs binding in mouse early embryos [Bisulfite-seq] [Early 2Cell]  
SRP474956  Transcriptomic and epigenomic profiling of Tet TKO neural stem cells to study NSC specification and multipotency [Embryonic Stem Cells, Neural Stem Cells]  
SRP475142  DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [ADM, Acinar, Acinar (Recovered), Duct]  
SRP476050  Cohesin trajectories shape the epigenetic and transcriptional landscape of clustered Protocadherin genes for single neuron identities [Olfactory Epithilium]  
SRP477968  Extraembryonic gut endoderm cells undergo programmed cell death elimination during development (WGBS) [Extraembryonic Endoderm (Distal), Extraembryonic Endoderm (Proximal), Hindgut Endoderm, Midgut Endoderm, Yolk Sac Endoderm]  
SRP478001  Global epigenetic stability of liver-resident invariant natural killer T cells in response to cues capable of inducing transcriptional re-programming [Liver iNKT (aGalCer/CD1d Tetramer+)]  
SRP480077  Remodeling the step-wise mouse placental development by using totipotent blastomere-like stem cells [WGBS] [mTELCs Induced, mTELSC Cultured In TX Medium, mTELSC-TO Cultured In TO Medium]  
SRP482520  OGT prevents DNA demethylation and suppresses the expression of transposable elements in heterochromatin by restraining TET activity genome-wide (WGBS) [Embrionic Stem Cells]  
SRP484966  Antisense transcription can induce expression memory via stable promoter repression [XX ESCs]  
SRP486307  An unbiased genome-wide screen reveals that mouse metastable epialleles are extremely rare [Kidney, Liver]  
SRP487504  Sex-Specific DNA Methylation and Gene Expression Changes in Mouse Placentas After Early Preimplantation Alcohol Exposure[Methyl-Seq] [Placenta]  
SRP490016  Methylation status of CD4+ and CD11b+ cells from Dnmt3a+/+ or Dnmt3aR878/+ mice [CD11b+ Cells, CD4+ Cells]  
SRP497496  Increased global DNA methylation by Dnmt3a disrupts skeletal muscle homeostasis, promotes age-related muscle atrophy, and reduces muscle metabolic elasticity [Skeletal Muscle, Gastrocnemius]  
SRP497502  The chromatin accessibility landscape of mouse oocytes during configuration transition [BS-seq] [Oocyte]  
SRP498773  GEO accession GSE262843 is currently private and is scheduled to be released on Jul 01, 2025. [CD8 T Cells]  
SRP500539  Maternal obesity induces the meiotic defects and epigenetic alterations during fetal oocyte development [BiSulfite-seq] [Primordial Germ Cells]  
SRP501862  Conserved epigenetic hallmarks of T-cell aging during immunity and malignancy [CD8 T Cells]  
SRP503857  Mutant IDH1 inhibition induces reverse transcriptase and dsDNA sensing to activate tumor immunity [mouse WGBS] [Liver Cells, Tumor Cells]  
SRP505989  Transgenerational inheritance of diabetes susceptibility in male offspring with maternal hyperandrogenism [WGBS] [SRS21226592, SRS21226593, SRS21226595, SRS21226596]  
SRP511326  CXXC5 stabilizes DNA methylation patterns in mouse embryonic stem cells [Bisulfite-Seq] [mESC]  
SRP512476  The role of the TET-dependent DNA demethylation pathway in photoreceptor development and pathology [SRS21554452, SRS21554453, SRS21554454, SRS21554455, SRS21554456, SRS21554457]  
SRP521262  Whole genome bisulfite sequencing of mice treated by mitochondrial transplantation [Brain, Muscle]  
SRP521804  Dnmt3a Controls Hematopoietic Stem Cells via DNA Methylation-Independent Regulation of Telomeres [BM, KSL]  
SRP522281  Early Moderate Prenatal Alcohol Exposure and Maternal Diet Impact Offspring DNA Methylation Across Species [Brain, Liver]  
SRP526206  Tet3 regulates terminal cell differentiation at the metabolic level [E18.5 Isolated Villi]  
SRP526448  Epigenetic regulators of clonal hematopoiesis control CD8 T cell stemness during immunotherapy [Bisulfite-Seq] [CD8 T Cells]  
SRP531904  The DNA demethylase TET1 modifies the impact of maternal folic acid status on embryonic brain development [E11.5 Brain]  
SRP534659  Erosion of somatic tissue identity with loss of the X-linked intellectual disability factor KDM5C [Embryonic Stem Cell, Extended Epiblast-Like Cell]  
SRP540228  The spatial zonation of the placental vasculature is specified by epigenetic mechanisms [WGBS] [Endothelial Cell]  
SRP551216  Transcriptome and DNA methylome in oocytes exposed to gestational diabetes [Ovary]  
SRP552104  Comparision of Differential methylation between Control and mutant Dnmt3a [KSL]  
Assembly: Mouse Jun. 2020 (GRCm39/mm39)