UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	K09E2.1	K09E2.1	0	chrX 8,683,969	contains similarity to Pfam domain PF00092 von Willebrand factor type A domain contains similarity to Interpro domain IPR002035 (von Willebrand factor, type A)
2	C04F12.5	C04F12.5	n/a	chrI 9,690,333	contains similarity to Plasmodium yoelii nigeriensis Ookinete surface antigen-like protein Pfs28.; TR:Q9GTY7
3	str-139	ZC513.9	n/a	chrV 8,061,503	C. elegans STR-139 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR002091 (Aromatic amino acid permease)
4	F14H3.12	F14H3.12	n/a	chrV 16,074,705	contains similarity to Pfam domain PF02149 Kinase associated domain 1 contains similarity to Interpro domain IPR001772 (Kinase-associated KA1)
5	srd-16	C04E6.9	n/a	chrV 5,899,272	C. elegans SRD-16 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR003002 (7TM chemoreceptor, subfamily 1), IPR000276 (GPCR, rhodopsin-like)
6	F53H2.1	F53H2.1	n/a	chrV 20,385,929	contains similarity to Pfam domain PF05218 Protein of unknown function (DUF713) contains similarity to Interpro domains IPR010989 (t-SNARE), IPR007883 (Protein of unknown function DUF713)
7	ZK930.2	ZK930.2	n/a	chrII 11,892,790	contains similarity to Interpro domain IPR010989 (t-SNARE)
8	F48A9.2	F48A9.2	n/a	chrI 6,593,082
9	srw-19	T10H4.8	n/a	chrV 15,280,555	C. elegans SRW-19 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
10	F52E10.4	F52E10.4	n/a	chrX 16,286,357	contains similarity to Homo sapiens Zinc finger protein 277; ENSEMBL:ENSP00000006035
11	math-7	C16C4.12	n/a	chrII 1,885,961	C. elegans MATH-7 protein; contains similarity to Pfam domain PF00917 MATH domain contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH)
12	F19D8.2	F19D8.2	n/a	chrX 13,835,397	contains similarity to Homo sapiens Splice isoform 1 of Q9UMN6 Myeloid/lymphoid or mixed-lineage leukemia protein 4; ENSEMBL:ENSP00000222270
13	F14D2.8	F14D2.8	n/a	chrII 3,348,717	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
14	F46F5.14	F46F5.14	n/a	chrII 800,774	contains similarity to Pfam domain PF03314 Protein of unknown function, DUF273 contains similarity to Interpro domain IPR004988 (Protein of unknown function DUF273)
15	C53B4.6	C53B4.6	n/a	chrIV 8,985,786	contains similarity to Pfam domain PF08449 UAA transporter family contains similarity to Interpro domain IPR013657 (UAA transporter)
16	T23B12.5	T23B12.5	n/a	chrV 8,447,277	contains similarity to Homo sapiens Isoform 1 of Post-GPI attachment to proteins factor 2; ENSEMBL:ENSP00000278243
17	H25K10.6	H25K10.6	n/a	chrIV 16,235,400	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
18	C41G6.13	C41G6.13	n/a	chrV 15,208,853	contains similarity to Homo sapiens Xylosyltransferase I; ENSEMBL:ENSP00000261381
19	dnj-4	C01G8.4	n/a	chrI 5,283,025	This gene encodes a protein containing a DnaJ ('J') domain.
20	Y38H6C.21	Y38H6C.21	n/a	chrV 20,550,079	contains similarity to Aquifex aeolicus Flagellar biosynthetic protein flhB.; SW:FLHB_AQUAE
21	srx-79	C01G10.2	n/a	chrV 15,098,590	C. elegans SRX-79 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
22	F59B1.4	F59B1.4	n/a	chrV 3,626,020	contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR000194 (ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)
23	ttr-30	T08A9.2	n/a	chrX 7,331,455	C. elegans TTR-30 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)
24	ttr-8	R13A5.6	n/a	chrIII 7,564,873	R13A5.6 encodes a protein containing a predicted signal sequence followed by a transthyretin-like domain; the product of R13A5.6 belongs to a family of apparently nematode-specific proteins whose function is not yet known; an R13A5.6::GFP promoter fusion directs expression outside of the nervous system.
25	clec-12	T27F6.2	n/a	chrI 12,477,625	C. elegans CLEC-12 protein; contains similarity to Pfam domains PF00431 (CUB domain) , PF00059 (Lectin C-type domain) (2)contains similarity to Interpro domains IPR000859 (CUB), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
26	srd-32	T19H12.5	n/a	chrV 4,867,995	C. elegans SRD-32 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR003945 (NADH-plastoquinone oxidoreductase, chain 5)
27	srg-7	C18F10.8	n/a	chrIII 6,267,278	C. elegans SRG-7 protein; contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
28	B0393.7	B0393.7	n/a	chrIII 4,777,124	contains similarity to Pfam domain PF00057 Low-density lipoprotein receptor domain class A contains similarity to Interpro domains IPR002172 (Low density lipoprotein-receptor, class A, cysteine-rich), IPR001881 (EGF-like calcium-binding), IPR013032 (EGF-like region, conserved site)
29	srt-56	Y73C8C.9	n/a	chrV 3,121,061	C. elegans SRT-56 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
30	vab-15	R07B1.1	n/a	chrX 9,848,439	The vab-15 gene encodes a msh-like homeobox gene that appears required for production of touch cell precursors, and that is orthologous to the human gene MSH HOMEO BOX HOMOLOG 1 (MSX1; OMIM:142983) which when mutated leads to disease.
31	C33A12.7	C33A12.7	n/a	chrIV 9,507,832	contains similarity to Pfam domain PF00753 Metallo-beta-lactamase superfamily contains similarity to Interpro domain IPR001279 (Beta-lactamase-like)
32	Y32B12A.5	Y32B12A.5	n/a	chrV 16,487,248	contains similarity to Pfam domain PF04590 Protein of unknown function, DUF595 contains similarity to Interpro domain IPR007669 (Protein of unknown function DUF595)
33	sri-77	D2062.9	n/a	chrII 2,604,314	C. elegans SRI-77 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
34	T24E12.5	T24E12.5	n/a	chrII 3,755,632	contains similarity to Interpro domain IPR000104 (Antifreeze protein, type I)
35	F36G9.3	F36G9.3	n/a	chrV 15,958,350	contains similarity to Pfam domains PF07690 (Major Facilitator Superfamily) , PF05978 (Eukaryotic protein of unknown function (DUF895)) contains similarity to Interpro domains IPR010291 (Protein of unknown function DUF895, eukaryotic), IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
36	srx-95	F41G3.11	n/a	chrII 6,753,887	C. elegans SRX-95 protein; contains similarity to Interpro domain IPR003915 (Polycystic kidney disease type 2 protein)
37	F15D4.2	F15D4.2	n/a	chrII 13,216,307	contains similarity to Strongylocentrotus purpuratus Protein ENDO16 (Fragment).; SW:P13665
38	hlh-12	C28C12.8	n/a	chrIV 8,478,993	C. elegans HLH-12 protein; contains similarity to Pfam domain PF00010 Helix-loop-helix DNA-binding domain contains similarity to Interpro domains IPR001092 (Basic helix-loop-helix dimerisation region bHLH), IPR011598 (Helix-loop-helix DNA-binding), IPR002418 (Transcription regulator Myc)
39	T14G8.2	T14G8.2	n/a	chrX 12,858,701	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
40	M163.6	M163.6	n/a	chrX 14,463,353	contains similarity to Xenopus laevis Hypothetical protein.; TR:Q7SZA3
41	str-138	ZC513.11	n/a	chrV 8,059,468	C. elegans STR-138 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
42	T28H10.1	T28H10.1	n/a	chrV 12,504,477	contains similarity to Pfam domain PF01648 4'-phosphopantetheinyl transferase superfamily contains similarity to Interpro domain IPR008278 (4'-phosphopantetheinyl transferase)
43	nhr-155	C14C6.4	n/a	chrV 540,344	C. elegans NHR-155 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
44	F07G11.3	F07G11.3	n/a	chrV 7,300,103	contains similarity to Pfam domain PF01697 Domain of unknown function contains similarity to Interpro domains IPR008167 (Protein of unknown function DUF23, C-terminal), IPR008166 (Protein of unknown function DUF23)
45	R13.2	R13.2	n/a	chrIV 10,826,996	contains similarity to Pfam domain PF00292 'Paired box' domain contains similarity to Interpro domains IPR001523 (Paired box protein, N-terminal), IPR011991 (Winged helix repressor DNA-binding), IPR009057 (Homeodomain-like)
46	W04D12.1	W04D12.1	n/a	chrIII 5,837,006
47	srx-39	C03A7.6	n/a	chrV 5,157,191	C. elegans SRX-39 protein; contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF01748 (Caenorhabditis serpentine receptor-like protein) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR002651 (Protein of unknown function DUF32), IPR013305 (ABC transporter, ABCB2), IPR000276 (GPCR, rhodopsin-like)
48	F57E7.2	F57E7.2	n/a	chrV 16,482,980	contains similarity to Psilotum nudum Hypothetical protein.; TR:Q8WHW9
49	nhr-188	F47C10.7	n/a	chrV 3,857,080	C. elegans NHR-188 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
50	C54D10.10	C54D10.10	n/a	chrV 12,449,327	contains similarity to Pfam domains PF00788 (Ras association (RalGDS/AF-6) domain) , PF02204 (Vacuolar sorting protein 9 (VPS9) domain) contains similarity to Interpro domains IPR013995 (Vacuolar sorting protein 9, subgroup), IPR003123 (Vacuolar sorting protein 9), IPR000159 (Ras-association)