Affine Alignment
 
Alignment between cpr-1 (top C52E4.1 329aa) and cpr-4 (bottom F44C4.3 335aa) score 17860

001 MKFLILTALCAVTLAFVPINHQSAVETLTGQALVDYVNSAQSLFKTE-HVEITEEEMKFK 059
    ||+||| || |||   |       +   | +|+ +|||| |||+| |   +|| |++| +
001 MKYLILAALVAVTAGLV-----IPLVPKTQEAITEYVNSKQSLWKAEIPKDITIEQVKKR 055

060 LMDGKYAAAHSDEIRATEQEVVLASVPATFDSRTQWSECKSIKLIRDQATCGSCWAFGAA 119
    ||  ++ | |+ ++   + ++   ++|||||+||||  | ||  ||||+ ||||||| ||
056 LMRTEFVAPHTPDVEVVKHDINEDTIPATFDARTQWPNCMSINNIRDQSDCGSCWAFAAA 115

120 EMISDRTCIETKGAQQPIISPDDLLSCCGSSCGNGCEGGYPIQALRWWDSKGVVTGGDYH 179
    |  ||| || + ||   ++| +|+|||| |+|| |||||||| | ++    |  ||| | 
116 EAASDRFCIASNGAVNTLLSAEDVLSCC-SNCGYGCEGGYPINAWKYLVKSGFCTGGSYE 174

180 GA-GCKPYPIAPC--TSGN-----CPES--KTPSCSMSC-QSGYSTAYAKDKHFGVSAYA 228
       ||||| +|||  | ||     ||+    ||+|   |    |+ ||  ||||| +|||
175 AQFGCKPYSLAPCGETVGNVTWPSCPDDGYDTPACVNKCTNKNYNVAYTADKHFGSTAYA 234

229 VPKNAASIQAEIYANGPVEAAFSVYEDFYKYKSGVYKHTAGKYLGGHAIKIIGWGTESGS 288
    | |  + ||||| |+|||||||+||||||+||+||| || |+ ||||||+|+||||++|+
235 VGKKVSQIQAEIIAHGPVEAAFTVYEDFYQYKTGVYVHTTGQELGGHAIRILGWGTDNGT 294

289 PYWLVANSWGVNWGESGFFKIYRGDDQCGIESAVVAGKAKV 329
    ||||||||| |||||+|+|+| || ++|||| ||| |  ||
295 PYWLVANSWNVNWGENGYFRIIRGTNECGIEHAVVGGVPKV 335