Affine Alignment
 
Alignment between srd-12 (top C39H7.6 325aa) and srj-6 (bottom F31F4.8 331aa) score 3458

014 IISVLGMCFNALLAYLALFQTPRVIKSYATLIVNFAITDFFACMFDFFVQQRLIPTGMTL 073
    |  ||    | |  || | ++ + +  |  |++ ||+ | |  + +      +| ||   
014 IFGVLSYIVNPLFIYLVLTKSSKHMGKYRFLLIGFAVFDIFYSIAEMLTPIAVINTGYGF 073

074 A-YVSNGFCKHWGPRTCFFGYSLMLHFLSHSLWSLLLSFSYRCYILYKP---APHRHTLV 129
    | ++++||          +  |    |++ |   |++ | || +||+ |         | 
074 ATFITDGFF----TENANYAISSRCTFIAISYALLIIHFVYRYFILFHPHLVDKMLQPLG 129

130 ILLMIIYIP---SLFQWISFIWSQDDPEEIREILHVAFPAYN---------LTGHVVTGT 177
    +  ||       + + |+   |     ||||+|+  ||   +         |||      
130 VFAMIALTAAHGASWTWLC-DWCLAPNEEIRDIVRPAFKEVHHVNSDNISLLTGQ-YRNA 187

178 KNILCFSALYTILHMTIPITPVYVCILILRRKIISRLSYQGVNITSDTKNLHSQLLMALT 237
     | + + + + || +|+         |+|  ||+ +++ |  |+++ +  |+ ||  || 
188 SNFVVYKSWFGILSLTLFSCYCMSVYLVLGYKIMKKMN-QNTNMSTISATLNRQLFKALV 246

238 YQAAIPGF--YLFSIYSYAIGQFGIYNHPALEYFTFSSFLLIPFLSPLASFIFVTPYRQF 295
     |  || |  +| ++ ++    | |       |    +    | + |+    |+  |+  
247 AQTCIPMFASFLPTVIAWYAPMFLINVTWWNNYICNVALSAFPLIDPVVVIYFIPNYKNT 306

296 IKLKLFRIVQIEPTETSNT 314
    + |  ||+ +   | || +
307 L-LVWFRLKKPTVTATSTS 324