UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	Y49F6C.6	Y49F6C.6	7.999999999999999e-122	chrII 3,364,648	contains similarity to Pfam domain PF01744 GLTT repeat (6 copies) contains similarity to Interpro domain IPR008164 (Repeat of unknown function XGLTT)
2	F07G11.4	F07G11.4	n/a	chrV 7,293,758	contains similarity to Pfam domain PF01697 Domain of unknown function contains similarity to Interpro domains IPR008167 (Protein of unknown function DUF23, C-terminal), IPR008166 (Protein of unknown function DUF23)
3	srg-34	Y51A2D.12	n/a	chrV 18,563,515	C. elegans SRG-34 protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
4	C01G5.4	C01G5.4	n/a	chrIV 6,533,692	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domains IPR003125 (Protein of unknown function WSN), IPR001399 (VP6 blue-tongue virus inner capsid protein)
5	srg-40	T19C4.4	n/a	chrV 11,163,867	C. elegans SRG-40 protein; contains similarity to Interpro domains IPR000500 (Connexins), IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
6	F22B3.7	F22B3.7	n/a	chrIV 11,418,098	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domain IPR006583 (CW)
7	str-253	F41B5.8	n/a	chrV 2,253,703	C. elegans STR-253 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR002091 (Aromatic amino acid permease)
8	nhr-77	T15D6.6	n/a	chrI 12,384,994	C. elegans NHR-77 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
9	spp-9	T25C12.2	n/a	chrX 11,487,901	C. elegans SPP-9 protein; contains similarity to Pfam domain PF03489 Saposin-like type B, region 2 contains similarity to Interpro domains IPR008138 (Saposin-like type B, 2), IPR011001 (Saposin-like), IPR008139 (Saposin B)
10	C31A11.1	C31A11.1	n/a	chrV 16,294,149	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domains IPR002656 (Acyltransferase 3), IPR006621 (Nose resistant to fluoxetine-4, N-terminal)
11	Y41E3.13	Y41E3.13	n/a	chrIV 15,058,268	contains similarity to Interpro domain IPR007985 (Haemolysin expression modulating)
12	K04F10.2	K04F10.2	n/a	chrI 6,362,454	contains similarity to Interpro domain IPR008979 (Galactose-binding like)
13	ZC412.1	ZC412.1	n/a	chrV 14,855,683	contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000611 (Neuropeptide Y receptor), IPR000276 (GPCR, rhodopsin-like)
14	srsx-13	C13D9.6	n/a	chrV 4,982,486	C. elegans SRSX-13 protein; contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
15	C54D10.3	C54D10.3	n/a	chrV 12,418,939	contains similarity to Pfam domain PF01549 ShK domain-like contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)
16	lgc-37	ZC482.5	n/a	chrIII 12,789,021	ZC482.5 is orthologous to the human gene GAMMA-AMINOBUTYRIC ACID A RECEPTOR GAMMA 2 (GABRG2; OMIM:137164), which when mutated leads to disease.
17	F40G9.8	F40G9.8	n/a	chrIII 164,235
18	clec-58	ZK666.3	n/a	chrII 10,475,101	C. elegans CLEC-58 protein; contains similarity to Pfam domain PF00092 von Willebrand factor type A domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin), IPR002035 (von Willebrand factor, type A)
19	T22B2.2	T22B2.2	n/a	chrX 3,922,438
20	kin-23	W04G5.6	n/a	chrI 11,641,436	kin-23 encodes a predicted protein tyrosine kinase; like KIN-30, KIN-23 contains an unusual K to R substitution in kinase subdomain VII; kin-23 mRNA is expressed strongly during the L1/L2 larval stages, weakly in L3 and L4 stages, and at undetectable levels in adults.
21	Y75B8A.10	Y75B8A.10	n/a	chrIII 12,181,866	contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR006662 (Thioredoxin-related)
22	srx-43	T10C6.3	n/a	chrV 16,018,889	C. elegans SRX-43 protein; contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
23	C50A2.3	C50A2.3	n/a	chrIV 1,148,209
24	T24D5.5	T24D5.5	n/a	chrX 12,599,103	contains similarity to Plasmodium falciparum PfEMP1-like protein.; TR:Q8IC59
25	C08D8.1	C08D8.1	n/a	chrV 8,347,824	contains similarity to Pfam domains PF07690 (Major Facilitator Superfamily) , PF05978 (Eukaryotic protein of unknown function (DUF895)) contains similarity to Interpro domains IPR010291 (Protein of unknown function DUF895, eukaryotic), IPR003567 (Cytochrome c-type biogenesis protein), IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
26	acl-12	C01C10.3	n/a	chrX 7,440,941	C. elegans ACL-12 protein; contains similarity to Interpro domain IPR002123 (Phospholipid/glycerol acyltransferase)
27	srbc-24	C45H4.10	n/a	chrV 2,152,386	C. elegans SRBC-24 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
28	F11D5.6	F11D5.6	n/a	chrX 3,325,709
29	R160.5	R160.5	n/a	chrX 4,370,650
30	C49F8.1	C49F8.1	n/a	chrX 13,363,169	contains similarity to Saccharomyces cerevisiae Actin-binding protein of the cortical actin cytoskeleton, important for activation of the Arp2/3 complex that plays a key role actin in cytoskeleton organization; SGD:YCR088W
31	M04C7.3	M04C7.3	n/a	chrI 8,546,387	contains similarity to Brucella melitensis Exopolyphosphatase (EC 3.6.1.11).; TR:Q8YCD4
32	Y116A8A.4	Y116A8A.4	n/a	chrIV 16,823,640	contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316) contains similarity to Interpro domain IPR005514 (Protein of unknown function DUF316)
33	srh-32	Y26G10.2	n/a	chrV 17,702,215	C. elegans SRH-32 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
34	F40B5.1	F40B5.1	n/a	chrX 8,376,670	F40B5.1 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; F40B5.1 has no clear orthologs in other organisms.
35	Y12A6A.2	Y12A6A.2	n/a	chrX 13,619,323	contains similarity to Phaseolus lunatus Double-headed bowman-birk inhibitor (Fragment).; TR:Q941H3
36	W03G9.5	W03G9.5	n/a	chrI 4,969,127	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
37	Y26D4A.9	Y26D4A.9	n/a	chrI 13,088,824	contains similarity to Pfam domain PF03175 DNA polymerase type B, organellar and viral contains similarity to Interpro domains IPR000215 (Protease inhibitor I4, serpin), IPR004868 (DNA-directed DNA polymerase, family B, mitochondria/virus)
38	F10G2.7	F10G2.7	n/a	chrV 7,335,453	contains similarity to Pfam domain PF06852 Protein of unknown function (DUF1248) contains similarity to Interpro domain IPR009658 (Protein of unknown function DUF1248)
39	col-52	D1007.2	n/a	chrI 4,572,052	C. elegans COL-52 protein; contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies) contains similarity to Interpro domains IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat)
40	clec-264	F31D4.4	n/a	chrV 20,844,595	C. elegans CLEC-264 protein; contains similarity to Pfam domains PF01466 (Skp1 family, dimerisation domain) , PF03931 (Skp1 family, tetramerisation domain) contains similarity to Interpro domains IPR001232 (SKP1 component), IPR016072 (SKP1 component, dimerisation), IPR011333 (BTB/POZ fold), IPR016073 (SKP1 component, POZ)
41	C17B7.3	C17B7.3	n/a	chrV 3,343,332	contains similarity to Pfam domain PF01579 Domain of unknown function DUF19 contains similarity to Interpro domains IPR016638 (Uncharacterised conserved protein UPF0376), IPR002542 (Protein of unknown function DUF19)
42	nhr-17	C02B4.2	n/a	chrX 12,665,768	nhr-17 encodes a member of the superfamily of nuclear receptors, which is one of the most abundant class of transcriptional regulators; nuclear receptors have a well conserved DNA binding domain and a less conserved C-terminal ligand binding domain.
43	F46B3.9	F46B3.9	n/a	chrV 20,621,052	contains similarity to Interpro domain IPR003645 (Follistatin-like, N-terminal)
44	W07G1.1	W07G1.1	n/a	chrII 13,938,717	contains similarity to Pfam domain PF03607 Doublecortin contains similarity to Interpro domain IPR003533 (Doublecortin)
45	C49D10.7	C49D10.7	n/a	chrII 3,856,247	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domain IPR002656 (Acyltransferase 3)
46	F53B1.3	F53B1.3	n/a	chrX 2,106,394
47	C49C3.15	C49C3.15	n/a	chrIV 17,334,573	contains similarity to Interpro domain IPR002101 (Myristoylated alanine-rich C-kinase substrate MARCKS)
48	R102.3	R102.3	n/a	chrIV 10,691,049	contains similarity to Broad bean wilt virus 2 210kDa protein.; TR:Q9E933
49	nhr-246	ZK1037.4	n/a	chrV 15,317,437	C. elegans NHR-246 protein; contains similarity to Pfam domains PF02958 (Domain of unknown function (DUF227)) , PF07914 (Protein of unknown function (DUF1679)) contains similarity to Interpro domains IPR011009 (Protein kinase-like), IPR012877 (Protein of unknown function DUF1679, Caenorhabditis species), IPR004119 (Protein of unknown function DUF227), IPR015897 (CHK kinase-like)
50	srv-10	F53F1.9	n/a	chrV 13,424,568	C. elegans SRV-10 protein; contains similarity to Interpro domain IPR001411 (Tetracycline resistance protein, TetB)