UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	Y39A1A.18	Y39A1A.18	5.0000000000000004e-76	chrIII 10,692,438	contains similarity to Methanosarcina mazei Transcriptional regulator, MerR family.; TR:Q8PSB2
2	Y43F8A.3	Y43F8A.3	n/a	chrV 19,379,196	contains similarity to Pfam domain PF07859 alpha/beta hydrolase fold contains similarity to Interpro domains IPR017157 (Arylacetamide deacetylase), IPR013094 (Alpha/beta hydrolase fold-3)
3	W01B6.4	W01B6.4	n/a	chrIV 10,075,527	contains similarity to Interpro domains IPR008962 (PapD-like), IPR000173 (Glyceraldehyde 3-phosphate dehydrogenase)
4	K09F6.4	K09F6.4	n/a	chrII 2,263,817	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domain IPR003125 (Protein of unknown function WSN)
5	acl-13	F08G5.2	n/a	chrIV 12,411,312	C. elegans ACL-13 protein; contains similarity to Pfam domain PF01553 Acyltransferase contains similarity to Interpro domain IPR002123 (Phospholipid/glycerol acyltransferase)
6	ZK262.4	ZK262.4	n/a	chrV 18,424,010	contains similarity to Arabidopsis thaliana Similarity to salt-inducible protein.; TR:Q9LVA2
7	F42G8.9	F42G8.9	n/a	chrIV 8,117,087
8	F53G12.8	F53G12.8	n/a	chrI 114,244	contains similarity to Homo sapiens Putative uncharacterized protein (Fragment); ENSEMBL:ENSP00000333119
9	rnh-1.1	ZK1290.6	n/a	chrII 7,526,915	C. elegans RNH-1.1 protein; contains similarity to Pfam domain PF00075 RNase H contains similarity to Interpro domains IPR002952 (Eggshell protein), IPR012337 (Polynucleotidyl transferase, Ribonuclease H fold), IPR002156 (Ribonuclease H)
10	C50C3.2	C50C3.2	n/a	chrIII 8,185,577	contains similarity to Pfam domains PF00435 (Spectrin repeat) (4), PF00036 (EF hand) contains similarity to Interpro domains IPR002017 (Spectrin repeat), IPR011992 (EF-Hand type), IPR002048 (Calcium-binding EF-hand)
11	F14E5.3	F14E5.3	n/a	chrII 8,436,197	contains similarity to Pfam domain PF00328 Histidine acid phosphatase contains similarity to Interpro domain IPR000560 (Histidine acid phosphatase)
12	C07G1.6	C07G1.6	n/a	chrIV 8,209,489
13	Y37A1A.2	Y37A1A.2	n/a	chrIV 13,909,126	contains similarity to Pfam domain PF05978 Eukaryotic protein of unknown function (DUF895) contains similarity to Interpro domains IPR010291 (Protein of unknown function DUF895, eukaryotic), IPR016196 (MFS general substrate transporter)
14	C14A4.13	C14A4.13	n/a	chrII 10,619,389	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
15	ent-3	K02E11.1	n/a	chrV 14,234,164	C. elegans ENT-3 protein; contains similarity to Pfam domain PF01733 Nucleoside transporter contains similarity to Interpro domain IPR002259 (Delayed-early response protein/equilibrative nucleoside transporter)
16	F35E12.4	F35E12.4	n/a	chrV 13,732,426	contains similarity to Pfam domain PF02408 CUB-like domain contains similarity to Interpro domains IPR003951 (Peptidase C58, Yersinia/Haemophilus virulence surface antigen), IPR003366 (CUB-like region)
17	C34C12.4	C34C12.4	n/a	chrIII 3,468,832	contains similarity to Homo sapiens Uncharacterized protein C4orf34; ENSEMBL:ENSP00000295958
18	K02D10.2	K02D10.2	n/a	chrIII 8,770,897
19	C28A5.6	C28A5.6	n/a	chrIII 4,426,610	contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core)
20	F28H1.5	F28H1.5	n/a	chrI 3,979,010
21	C56A3.3	C56A3.3	n/a	chrV 13,533,300	C56A3.3 encodes a homolog of the functionally active Fmrf Receptor (FR; CG2114) of D. melanogaster; it is thus possible that C56A3.3 is a receptor for one of the FMRF-like neurotransmitters in C. elegans (e.g., FLP-1 through FLP-12).
22	F59A3.7	F59A3.7	n/a	chrI 5,517,931
23	C38C6.5	C38C6.5	n/a	chrII 14,631,497	contains similarity to Interpro domain IPR001574 (Ribosome-inactivating protein)
24	srg-56	C24B9.10	n/a	chrV 2,736,901	C. elegans SRG-56 protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
25	C36F7.5	C36F7.5	n/a	chrI 9,575,404	contains similarity to Pfam domain PF03057 Protein of unknown function contains similarity to Interpro domains IPR004296 (Protein of unknown function DUF236), IPR003979 (Tropoelastin), IPR013286 (Annexin, type VII)
26	K10G9.1	K10G9.1	n/a	chrIII 10,296,799	contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
27	R11E3.1	R11E3.1	n/a	chrIV 4,790,837	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
28	F22B5.5	F22B5.5	n/a	chrII 8,453,880	contains similarity to Pfam domain PF06852 Protein of unknown function (DUF1248) contains similarity to Interpro domain IPR009658 (Protein of unknown function DUF1248)
29	try-6	F48A9.3	n/a	chrI 6,586,594	C. elegans TRY-6 protein; contains similarity to Pfam domains PF00089 (Trypsin) , PF03761 (Domain of unknown function (DUF316)) contains similarity to Interpro domains IPR001314 (Peptidase S1A, chymotrypsin), IPR001254 (Peptidase S1 and S6, chymotrypsin/Hap), IPR005514 (Protein of unknown function DUF316), IPR009003 (Peptidase, trypsin-like serine and cysteine)
30	B0207.1	B0207.1	n/a	chrI 5,966,138	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR000387 (Protein-tyrosine phosphatase), IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000005 (Helix-turn-helix, AraC type), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000694 (Proline-rich region), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
31	ttr-12	F46B3.4	n/a	chrV 20,603,550	C. elegans TTR-12 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)
32	W07B8.3	W07B8.3	n/a	chrV 1,125,705
33	daf-7	B0412.2	n/a	chrIII 812,789	daf-7 encodes a member of the transforming growth factor beta superfamily that affects dauer larvae formation in a TGF-beta-mediated pathway and also affects egg laying; expressed in the ASI neurons.
34	Y37D8A.8	Y37D8A.8	n/a	chrIII 12,867,161	contains similarity to Interpro domain IPR006629 (LPS-induced tumor necrosis factor alpha factor)
35	K02F6.3	K02F6.3	n/a	chrII 2,547,902	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domain IPR003125 (Protein of unknown function WSN)
36	R02D5.3	R02D5.3	n/a	chrV 14,483,717	contains similarity to Arabidopsis thaliana Putative RNA-binding protein.; TR:Q9SHZ5
37	fbxa-96	H03G16.4	n/a	chrX 15,059,361	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
38	F47F6.4	F47F6.4	n/a	chrII 1,262,570
39	ZC581.2	ZC581.2	n/a	chrI 6,656,611	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
40	K10C9.7	K10C9.7	7e-41	chrV 1,066,687
41	F46B6.10	F46B6.10	n/a	chrV 9,801,717	contains similarity to Homo sapiens Hypothetical protein; TR:Q96QJ8
42	F58F12.3	F58F12.3	n/a	chrII 6,390,234
43	lgc-30	F58H7.3	n/a	chrIV 932,249	C. elegans LGC-30 protein; contains similarity to Pfam domain PF02931 Neurotransmitter-gated ion-channel ligand binding domain contains similarity to Interpro domains IPR002394 (Nicotinic acetylcholine receptor, N-terminal), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding)
44	F16H6.3	F16H6.3	n/a	chrV 18,196,549	contains similarity to Pfam domain PF01549 ShK domain-like contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)
45	ZK892.5	ZK892.5	n/a	chrII 10,008,728	contains similarity to Interpro domain IPR016196 (MFS general substrate transporter)
46	R04B5.1	R04B5.1	n/a	chrV 10,078,069	contains similarity to Culex nigripalpus baculovirus Putative 33 kDa early protein (CUN014 similar to AcMNPV ORF92).; TR:Q99GP2
47	H05L14.1	H05L14.1	n/a	chrI 7,974,757	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
48	C55C3.3	C55C3.3	n/a	chrIV 5,686,761	contains similarity to Trypanosoma cruzi Trans-sialidase, putative.; TR:Q4E0H9
49	R01E6.5	R01E6.5	n/a	chrX 13,537,467	contains similarity to Interpro domain IPR002952 (Eggshell protein)
50	F26A1.3	F26A1.3	n/a	chrIII 4,827,878	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)