UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	T04A6.2	T04A6.2	2e-85	chrIII 7,615,172
2	F46F5.14	F46F5.14	n/a	chrII 800,774	contains similarity to Pfam domain PF03314 Protein of unknown function, DUF273 contains similarity to Interpro domain IPR004988 (Protein of unknown function DUF273)
3	W01B6.8	W01B6.8	n/a	chrIV 10,083,904	contains similarity to Xenopus laevis Nuclear/mitotic apparatus protein.; TR:P70012
4	aqp-3	Y69E1A.7	n/a	chrIV 10,962,555	aqp-3 encodes an aquaglyceroporin whose expression in Xenopus oocytes increases water or glycerol permeability five- to seven-fold; loss of AQP-3 activity via mutation or RNAi results in no obvious defects; however, AQP-3, in conjunction with AQP-2, AQP-4, and AQP-8, is weakly required for recovery from hypotonic stress; AQP-3 is expressed in the intestine, excretory cell, seminal vesicle, and vas deferens.
5	T05A6.4	T05A6.4	n/a	chrII 7,821,360	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
6	T06C10.3	T06C10.3	n/a	chrIV 7,871,932	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
7	B0222.2	B0222.2	n/a	chrV 9,136,662	contains similarity to Pfam domain PF01384 Phosphate transporter family contains similarity to Interpro domain IPR001204 (Phosphate transporter)
8	T10D4.7	T10D4.7	n/a	chrII 3,118,051	contains similarity to Pfam domain PF02343 Domain of unknown function DUF130 contains similarity to Interpro domain IPR003326 (Protein of unknown function DUF130)
9	W02B3.5	W02B3.5	n/a	chrIII 686,655	contains similarity to Pfam domain PF06828 Fukutin-related contains similarity to Interpro domain IPR009644 (Fukutin-related)
10	cwp-2	C37H5.11	n/a	chrV 4,842,261	cwp-2 encodes a nematode-specific protein that is coexpressed with lov-1 and pkd-2.
11	sri-37	D2062.2	n/a	chrII 2,630,401	C. elegans SRI-37 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
12	W03G1.2	W03G1.2	n/a	chrIV 525,588	contains similarity to Interpro domain IPR005819 (Histone H5)
13	F32B6.4	F32B6.4	n/a	chrIV 9,891,311	contains similarity to Dictyostelium discoideum Similar to Mus musculus (Mouse). 13 days embryo male testis cDNA,sRIKEN full-length enriched library, clone:6030407P11 product:NIMAs(Never in mitosis gene a)-related expressed kinase 1, full insertssequence.; TR:Q86I06
14	C35B1.3	C35B1.3	n/a	chrIV 4,081,235
15	F35C5.4	F35C5.4	n/a	chrII 12,891,236	contains similarity to Homo sapiens Mucin-2 precursor; ENSEMBL:ENSP00000351956
16	far-4	F15B9.2	n/a	chrV 12,999,023	far-4 encodes a fatty acid and retinol-binding protein, paralogous to FAR-3 and FAR-5 and distantly homologous to FAR proteins of parasitic nematodes; FAR-4 binds lipids in vitro; far-4 is transcribed at highest levels in the fourth larval stage, and is dispensable for viability and gross morphology in mass RNAi assays.
17	ZK697.3	ZK697.3	n/a	chrV 1,729,883	contains similarity to Interpro domain IPR001411 (Tetracycline resistance protein, TetB)
18	tag-272	C34B2.1	n/a	chrI 10,689,540	C. elegans TAG-272 protein ;
19	clec-110	F17B5.5	n/a	chrI 13,204,938	C. elegans CLEC-110 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
20	F37A4.5	F37A4.5	n/a	chrIII 6,712,464	contains similarity to Pfam domain PF01398 Mov34/MPN/PAD-1 family contains similarity to Interpro domains IPR000555 (Mov34/MPN/PAD-1), IPR006162 (Phosphopantetheine attachment site), IPR003639 (Mov34-1)
21	srbc-14	T05E12.2	n/a	chrV 17,071,071	C. elegans SRBC-14 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
22	K12H4.6	K12H4.6	n/a	chrIII 8,042,653
23	C05B5.1	C05B5.1	n/a	chrIII 9,987,900	contains similarity to Clostridium acetobutylicum Membrane associated chemotaxis sensory transducer protein (MSPsdomain and HAMP domain).; TR:Q97JD4
24	K06B4.4	K06B4.4	n/a	chrV 15,669,604	contains similarity to Interpro domain IPR006025 (Neutral zinc metallopeptidases, zinc-binding region)
25	F36A4.1	F36A4.1	n/a	chrIV 4,272,674	contains similarity to Pfam domain PF05912 Caenorhabditis elegans protein of unknown function (DUF870) contains similarity to Interpro domain IPR008588 (Protein of unknown function DUF870, Caenorhabditis species)
26	F47C12.6	F47C12.6	n/a	chrIV 3,991,939	contains similarity to Pfam domain PF05912 Caenorhabditis elegans protein of unknown function (DUF870) contains similarity to Interpro domain IPR008588 (Protein of unknown function DUF870, Caenorhabditis species)
27	srj-8	T28A11.9	n/a	chrV 3,248,476	C. elegans SRJ-8 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
28	ferl-1	T05E8.1	n/a	chrI 5,457,629	C. elegans FERL-1 protein; contains similarity to Pfam domains PF00168 (C2 domain) , PF08165 (FerA (NUC095) domain) , PF08150 (FerB (NUC096) domain) contains similarity to Interpro domains IPR012561 (FerB), IPR006614 (Dysferlin, C-terminal), IPR008973 (C2 calcium/lipid-binding region, CaLB), IPR012560 (FerA), IPR006613 (Dysferlin, N-terminal), IPR000008 (C2 calcium-dependent membrane targeting)
29	B0228.8	B0228.8	n/a	chrII 7,760,555
30	W07G1.7	W07G1.7	n/a	chrII 13,965,516
31	F22B7.3	F22B7.3	n/a	chrIII 8,649,167
32	F07F6.1	F07F6.1	n/a	chrII 5,439,042	contains similarity to Interpro domain IPR012677 (Nucleotide-binding, alpha-beta plait)
33	F53E10.4	F53E10.4	n/a	chrV 2,593,813
34	spe-27	C06E7.6	n/a	chrIV 5,865,200	spe-27 encodes a novel, hydrophilic protein; spe-27 is required for sperm activation (morphogenesis of sperm to crawling spermatozoa), and may act in a common signaling pathway with spe-12 and spe-29 to initiate sperm activation, based on genetic analysis.
35	fipr-23	C37A5.4	n/a	chrI 14,153,722	C. elegans FIPR-23 protein ; contains similarity to Homo sapiens Keratin-associated protein 20-2; ENSEMBL:ENSP00000330746
36	F48G7.9	F48G7.9	n/a	chrV 628,338	contains similarity to Pfam domain PF00130 Phorbol esters/diacylglycerol binding domain (C1 domain) contains similarity to Interpro domains IPR015727 (Protein kinase C mu-related), IPR002219 (Protein kinase C, phorbol ester/diacylglycerol binding)
37	T05F1.7	T05F1.7	n/a	chrI 9,640,961	contains similarity to Paramecium tetraurelia Chromosome undetermined scaffold_33, whole genome shotgun sequence.; TR:A0D056
38	clec-119	F47F6.5	n/a	chrII 1,256,978	C. elegans CLEC-119 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
39	srh-166	Y38H6C.12	n/a	chrV 20,520,671	C. elegans SRH-166 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
40	F35E2.3	F35E2.3	n/a	chrI 11,735,172	contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316) contains similarity to Interpro domain IPR005514 (Protein of unknown function DUF316)
41	fbxa-99	F36G9.14	n/a	chrV 15,982,244	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
42	numr-1	F08F8.5	n/a	chrIII 7,362,966	C. elegans NUMR-1 protein ;
43	nas-24	F20G2.4	n/a	chrV 13,770,454	nas-24 encodes an astacin-like metalloprotease.
44	R02F2.6	R02F2.6	n/a	chrIII 5,478,761
45	C50H2.7	C50H2.7	n/a	chrV 9,923,573	contains similarity to Interpro domain IPR011009 (Protein kinase-like)
46	F28H7.4	F28H7.4	n/a	chrV 10,746,917	contains similarity to Interpro domain IPR011893 (SelT/selW/selH selenoprotein)
47	E02H9.9	E02H9.9	n/a	chrIII 2,467,742
48	F19F10.1	F19F10.1	n/a	chrV 7,563,460	contains similarity to Pfam domain PF00178 Ets-domain contains similarity to Interpro domains IPR000418 (Ets), IPR011991 (Winged helix repressor DNA-binding)
49	math-48	ZK250.6	n/a	chrII 1,945,985	C. elegans MATH-48 protein; contains similarity to Pfam domains PF07735 (F-box associated) , PF00917 (MATH domain) (4)contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH), IPR012885 (F-box associated type 2)
50	D1037.5	D1037.5	n/a	chrI 3,692,099	contains similarity to Pfam domains PF01734 (Patatin-like phospholipase) , PF00023 (Ankyrin repeat) (2)contains similarity to Interpro domains IPR016035 (Acyl transferase/acyl hydrolase/lysophospholipase), IPR002641 (Patatin), IPR002110 (Ankyrin)