UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	fbxa-195	R09B5.1	0	chrV 1,435,696	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
2	B0207.10	B0207.10	n/a	chrI 5,959,278
3	srg-55	W09D12.2	n/a	chrV 14,927,504	C. elegans SRG-55 protein ;
4	T15D6.12	T15D6.12	n/a	chrI 12,400,253	contains similarity to Pfam domain PF01697 Domain of unknown function contains similarity to Interpro domain IPR008166 (Protein of unknown function DUF23)
5	srj-16	T06A1.2	n/a	chrV 1,955,236	C. elegans SRJ-16 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
6	srsx-2	F20E11.2	n/a	chrV 17,437,669	C. elegans SRSX-2 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
7	T08D2.6	T08D2.6	n/a	chrX 180,977	contains similarity to Homo sapiens Protein YIPF4; ENSEMBL:ENSP00000238831
8	ZK1073.1	ZK1073.1	n/a	chrX 16,126,525	contains similarity to Pfam domain PF03096 Ndr family contains similarity to Interpro domain IPR004142 (Ndr)
9	F59C12.3	F59C12.3	n/a	chrX 16,606,372	contains similarity to Interpro domain IPR009114 (Angiomotin)
10	B0546.5	B0546.5	n/a	chrIV 3,389,078	contains similarity to Pfam domain PF06681 Protein of unknown function (DUF1182) contains similarity to Interpro domain IPR010601 (Protein of unknown function DUF1182)
11	srv-10	F53F1.9	n/a	chrV 13,424,568	C. elegans SRV-10 protein; contains similarity to Interpro domain IPR001411 (Tetracycline resistance protein, TetB)
12	K04F10.2	K04F10.2	n/a	chrI 6,362,454	contains similarity to Interpro domain IPR008979 (Galactose-binding like)
13	ceh-28	K03A11.3	n/a	chrX 13,075,231	A homeobox protein of the NK-2 family; it is expressed in a single pharyngeal neuron, M4.
14	F53F4.1	F53F4.1	n/a	chrV 13,585,118	contains similarity to Interpro domain IPR002952 (Eggshell protein)
15	T08G5.2	T08G5.2	n/a	chrV 14,025,155	contains similarity to Homo sapiens Galactoside 2-alpha-L-fucosyltransferase 1; ENSEMBL:ENSP00000312021
16	W04E12.3	W04E12.3	n/a	chrV 19,737,520	contains similarity to Bacillus subtilis Nuclease sbcCD subunit C.; SW:SBCC_BACSU
17	srbc-24	C45H4.10	n/a	chrV 2,152,386	C. elegans SRBC-24 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
18	Y5F2A.3	Y5F2A.3	n/a	chrIV 11,069,794	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domain IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
19	C45G3.4	C45G3.4	n/a	chrI 9,219,134	contains similarity to Dictyostelium discoideum Prespore-specific protein (Fragment).; TR:O97140
20	C44C10.6	C44C10.6	n/a	chrX 11,698,664	contains similarity to Streptococcus pneumoniae GtrA family protein.; TR:Q97R28
21	C12D5.4	C12D5.4	n/a	chrV 7,672,548
22	C50A2.3	C50A2.3	n/a	chrIV 1,148,209
23	C41G6.12	C41G6.12	n/a	chrV 15,207,410	contains similarity to Interpro domain IPR000168 (Nematode 7TM chemoreceptor (probably olfactory))
24	C32B5.3	C32B5.3	n/a	chrII 981,863
25	C17B7.12	C17B7.12	n/a	chrV 3,353,590
26	srw-91	K04F1.4	n/a	chrV 1,680,088	C. elegans SRW-91 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
27	srz-95	Y102A5C.33	n/a	chrV 16,992,941	C. elegans SRZ-95 protein ;
28	F32B4.5	F32B4.5	n/a	chrI 11,519,244	contains similarity to Homo sapiens BTB/POZ domain-containing protein KCTD16; ENSEMBL:ENSP00000329906
29	srg-40	T19C4.4	n/a	chrV 11,163,867	C. elegans SRG-40 protein; contains similarity to Interpro domains IPR000500 (Connexins), IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
30	F58G4.3	F58G4.3	n/a	chrV 8,105,172	contains similarity to Pfam domain PF02520 Domain of unknown function DUF148 contains similarity to Interpro domain IPR003677 (Protein of unknown function DUF148)
31	F19B10.3	F19B10.3	n/a	chrII 3,664,939
32	ZC239.13	ZC239.13	n/a	chrII 3,222,611	contains similarity to Pfam domain PF02214 K+ channel tetramerisation domain contains similarity to Interpro domains IPR011333 (BTB/POZ fold), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation)
33	nhr-174	E03H4.6	n/a	chrI 12,418,082	C. elegans NHR-174 protein; contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2-type)
34	C28H8.2	C28H8.2	n/a	chrIII 5,923,760
35	gst-11	R11G1.3	n/a	chrX 3,633,139	C. elegans GST-11 protein; contains similarity to Pfam domains PF00043 (Glutathione S-transferase, C-terminal domain) , PF02798 (Glutathione S-transferase, N-terminal domain) contains similarity to Interpro domains IPR012336 (Thioredoxin-like fold), IPR003080 (Glutathione S-transferase, alpha class), IPR012335 (Thioredoxin fold), IPR004046 (Glutathione S-transferase, C-terminal), IPR004045 (Glutathione S-transferase, N-terminal), IPR010987 (Glutathione S-transferase, C-terminal-like)
36	nhr-158	C17E7.6	n/a	chrV 3,872,180	C. elegans NHR-158 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
37	F46F5.15	F46F5.15	n/a	chrII 788,813
38	T20D4.16	T20D4.16	n/a	chrV 3,394,536
39	K09C4.9	K09C4.9	n/a	chrX 3,271,553
40	srw-86	C25F9.7	n/a	chrV 19,400,392	C. elegans SRW-86 protein ;
41	srz-6	T21B4.1	n/a	chrII 12,492,894	C. elegans SRZ-6 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
42	F16G10.15	F16G10.15	n/a	chrII 2,406,470	contains similarity to Pfam domain PF01827 FTH domain contains similarity to Interpro domain IPR002900 (Protein of unknown function DUF38, Caenorhabditis species)
43	fbxb-6	F07E5.1	n/a	chrII 2,066,717	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
44	C43H6.6	C43H6.6	n/a	chrX 2,397,074	contains similarity to Pfam domains PF00059 (Lectin C-type domain) , PF00431 (CUB domain) contains similarity to Interpro domains IPR000859 (CUB), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
45	F23B2.10	F23B2.10	n/a	chrIV 9,153,550	contains similarity to Interpro domain IPR001841 (Zinc finger, RING-type)
46	T28A11.3	T28A11.3	n/a	chrV 3,275,745	contains similarity to Pfam domain PF01579 Domain of unknown function DUF19 contains similarity to Interpro domains IPR016638 (Uncharacterised conserved protein UPF0376), IPR002542 (Protein of unknown function DUF19)
47	C17B7.8	C17B7.8	n/a	chrV 3,322,428	C17B7.8 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; C17B7.8 has no clear orthologs in other organisms.
48	R160.5	R160.5	n/a	chrX 4,370,650
49	C44E12.1	C44E12.1	n/a	chrX 7,598,320	contains similarity to Pfam domains PF01546 (Peptidase family M20/M25/M40) , PF07687 (Peptidase dimerisation domain) contains similarity to Interpro domains IPR011650 (Peptidase M20, dimerisation), IPR002933 (Peptidase M20)
50	B0336.12	B0336.12	n/a	chrIII 5,710,236