UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	nspc-9	F42F12.1	3e-58	chrX 12,343,078	C. elegans NSPC-9 protein ;
2	C15A11.4	C15A11.4	n/a	chrI 7,399,849	contains similarity to Interpro domains IPR003016 (2-oxo acid dehydrogenase, lipoyl-binding site), IPR001411 (Tetracycline resistance protein, TetB)
3	srg-69	F09E5.4	n/a	chrII 5,356,499	C. elegans SRG-69 protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
4	E02H4.6	E02H4.6	n/a	chrX 14,251,350	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
5	F14H3.5	F14H3.5	n/a	chrV 16,056,489	contains similarity to Saccharomyces cerevisiae may be involved in connecting nuclear microtubules to the spindle pole body; SGD:YDR356W
6	F55C12.6	F55C12.6	n/a	chrII 5,875,271	contains similarity to Pfam domain PF06852 Protein of unknown function (DUF1248) contains similarity to Interpro domain IPR009658 (Protein of unknown function DUF1248)
7	sri-37	D2062.2	n/a	chrII 2,630,401	C. elegans SRI-37 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
8	C13A2.9	C13A2.9	n/a	chrV 7,263,287	contains similarity to Pfam domain PF01482 Domain of unknown function DUF13 contains similarity to Interpro domain IPR002485 (Protein of unknown function DUF13)
9	T28A11.20	T28A11.20	n/a	chrV 3,272,236	T28A11.20 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; T28A11.20 has no clear orthologs in other organisms.
10	T10E9.1	T10E9.1	n/a	chrI 6,545,803	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
11	nas-28	F42A10.8	n/a	chrIII 6,182,093	C. elegans NAS-28 protein; contains similarity to Pfam domain PF01400 Astacin (Peptidase family M12A) contains similarity to Interpro domains IPR017050 (Peptidase M12A, astacin, nematode), IPR006025 (Peptidase M, neutral zinc metallopeptidases, zinc-binding site), IPR001506 (Peptidase M12A, astacin), IPR006026 (Peptidase, metallopeptidases), IPR000859 (CUB), IPR013032 (EGF-like region, conserved site)
12	fbxb-68	F09C3.3	n/a	chrI 14,286,378	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function.
13	F20D6.9	F20D6.9	n/a	chrV 8,177,251	contains similarity to Pfam domain PF00125 Core histone H2A/H2B/H3/H4 contains similarity to Interpro domains IPR000164 (Histone H3), IPR009072 (Histone-fold), IPR007125 (Histone core)
14	srj-8	T28A11.9	n/a	chrV 3,248,476	C. elegans SRJ-8 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
15	fut-3	F59E12.13	n/a	chrII 5,658,783	C. elegans FUT-3 protein; contains similarity to Pfam domain PF00852 Glycosyltransferase family 10 (fucosyltransferase) contains similarity to Interpro domain IPR001503 (Glycosyl transferase, family 10)
16	W06D11.5	W06D11.5	n/a	chrX 12,300,631	contains similarity to Homo sapiens Hypothetical protein KIAA1801; ENSEMBL:ENSP00000256007
17	K08H2.3	K08H2.3	n/a	chrX 13,237,815	contains similarity to Rattus norvegicus Inositol 1,4,5-trisphosphate 3-kinase C.; TR:Q80ZG2
18	srj-11	T28A11.12	n/a	chrV 3,242,029	C. elegans SRJ-11 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
19	srw-132	T05B4.5	n/a	chrV 4,107,240	C. elegans SRW-132 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
20	C43F9.7	C43F9.7	n/a	chrIV 10,593,293	contains similarity to Xanthomonas campestris Hypothetical protein XCC1495.; TR:Q8PAI8
21	C36C9.1	C36C9.1	n/a	chrX 1,684,665	contains similarity to Dictyostelium discoideum Similar to Homo sapiens (Human). Dentin sialophosphoprotein [Contains:sDentin phosphoprotein (Dentin phosphophoryn) (DPP); Dentinssialoprotein (DSP)].; TR:Q869X8
22	acr-14	T05C12.2	n/a	chrII 8,175,996	acr-14 encodes a protein that contains neurotransmitter-gated ion-channel ligand-binding and transmembrane domains.
23	clec-127	W10G11.5	n/a	chrII 3,568,702	C. elegans CLEC-127 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
24	F31B9.3	F31B9.3	n/a	chrX 15,924,034	contains similarity to Homo sapiens Similar to polymerase (RNA) III; ENSEMBL:ENSP00000334758
25	ZK380.2	ZK380.2	n/a	chrX 1,633,167	contains similarity to Interpro domain IPR011072 (HR1 rho-binding repeat)
26	glb-7	C23H5.2	n/a	chrIV 2,124,416	glb-7 encodes a globin with no obvious function in mass RNAi assays.
27	srx-111	T24E12.4	n/a	chrII 3,758,519	C. elegans SRX-111 protein ;
28	C29G2.1	C29G2.1	n/a	chrV 2,591,466
29	F39E9.6	F39E9.6	n/a	chrII 3,311,104	F39E9.6 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; F39E9.6 has no clear orthologs in other organisms.
30	sri-12	T22H2.1	n/a	chrI 11,700,163	C. elegans SRI-12 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
31	srw-130	T24A6.14	n/a	chrV 3,547,931	C. elegans SRW-130 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
32	fbxa-170	C36C9.3	n/a	chrX 1,677,298	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
33	T23H2.4	T23H2.4	n/a	chrI 6,455,456
34	F02D10.6	F02D10.6	n/a	chrX 13,450,586	contains similarity to Cryptophlebia leucotreta granulosis virus Hypothetical protein.; TR:Q7T5R9
35	C04B4.2	C04B4.2	n/a	chrX 12,284,223	contains similarity to Interpro domain IPR002048 (Calcium-binding EF-hand)
36	clec-223	C03E10.5	n/a	chrV 11,275,618	C. elegans CLEC-223 protein; contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies) contains similarity to Interpro domains IPR000694 (Proline-rich region), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin), IPR008160 (Collagen triple helix repeat)
37	npp-12	T23H2.1	n/a	chrI 6,450,639	npp-12 encodes Gp210, an evolutionarily conserved membrane protein of the nuclear pore complex (NPC); NPP-12 is required for embryonic viability and normal nuclear membrane structures.
38	T08G5.1	T08G5.1	n/a	chrV 14,019,744	contains similarity to Saccharomyces cerevisiae Protein that may function as a cochaperone, as suggested by the presence of a DnaJ-like domain; SGD:YNL227C
39	rgs-9	ZC53.7	n/a	chrX 1,916,166	C. elegans RGS-9 protein; contains similarity to Interpro domains IPR015905 (Isoleucyl-tRNA synthetase, class Ia, N-terminal), IPR016137 (Regulator of G protein signalling superfamily), IPR000342 (Regulator of G protein signalling)
40	F54D10.9	F54D10.9	n/a	chrII 3,830,742	contains similarity to Pfam domain PF03380 Caenorhabditis protein of unknown function, DUF282 contains similarity to Interpro domain IPR005044 (Protein of unknown function DUF282, Caenorhabditis species)
41	T14E8.2	T14E8.2	n/a	chrX 6,542,867	contains similarity to Interpro domain IPR002172 (Low density lipoprotein-receptor, class A, cysteine-rich)
42	ZC53.1	ZC53.1	n/a	chrX 1,912,323
43	T08A9.4	T08A9.4	n/a	chrX 7,313,654	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
44	B0563.8	B0563.8	n/a	chrX 9,174,023
45	mdt-1.2	T23C6.1	n/a	chrX 17,152,950	C. elegans MDT-1.2 protein ;
46	C47C12.2	C47C12.2	n/a	chrX 7,754,107
47	T08D2.8	T08D2.8	n/a	chrX 196,174	contains similarity to Pfam domain PF02985 HEAT repeat contains similarity to Interpro domains IPR000694 (Proline-rich region), IPR000357 (HEAT), IPR016024 (Armadillo-type fold)
48	C13A2.5	C13A2.5	n/a	chrV 7,277,113	contains similarity to Pfam domain PF01697 Domain of unknown function contains similarity to Interpro domains IPR008167 (Protein of unknown function DUF23, C-terminal), IPR008166 (Protein of unknown function DUF23)
49	cids-1	C02F5.4	n/a	chrIII 8,245,008	C. elegans CIDS-1 protein; contains similarity to Pfam domain PF04818 Protein of unknown function, DUF618 contains similarity to Interpro domains IPR006569 (Regulation of nuclear pre-mRNA protein), IPR006903 (Protein of unknown function DUF618), IPR008942 (ENTH/VHS)
50	F55A3.5	F55A3.5	n/a	chrI 10,782,421	contains similarity to Interpro domains IPR012336 (Thioredoxin-like fold), IPR012335 (Thioredoxin fold), IPR000889 (Glutathione peroxidase)