UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	F16H6.3	F16H6.3	1.9999999999999998e-138	chrV 18,196,549	contains similarity to Pfam domain PF01549 ShK domain-like contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)
2	F19C7.5	F19C7.5	n/a	chrIV 4,596,309
3	F14E5.3	F14E5.3	n/a	chrII 8,436,197	contains similarity to Pfam domain PF00328 Histidine acid phosphatase contains similarity to Interpro domain IPR000560 (Histidine acid phosphatase)
4	daf-7	B0412.2	n/a	chrIII 812,789	daf-7 encodes a member of the transforming growth factor beta superfamily that affects dauer larvae formation in a TGF-beta-mediated pathway and also affects egg laying; expressed in the ASI neurons.
5	ZK262.4	ZK262.4	n/a	chrV 18,424,010	contains similarity to Arabidopsis thaliana Similarity to salt-inducible protein.; TR:Q9LVA2
6	K02F6.3	K02F6.3	n/a	chrII 2,547,902	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domain IPR003125 (Protein of unknown function WSN)
7	F53G12.8	F53G12.8	n/a	chrI 114,244	contains similarity to Homo sapiens Putative uncharacterized protein (Fragment); ENSEMBL:ENSP00000333119
8	F37E3.3	F37E3.3	n/a	chrI 6,430,598	contains similarity to Interpro domains IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core)
9	K02D10.2	K02D10.2	n/a	chrIII 8,770,897
10	Y43F8A.3	Y43F8A.3	n/a	chrV 19,379,196	contains similarity to Pfam domain PF07859 alpha/beta hydrolase fold contains similarity to Interpro domains IPR017157 (Arylacetamide deacetylase), IPR013094 (Alpha/beta hydrolase fold-3)
11	srg-56	C24B9.10	n/a	chrV 2,736,901	C. elegans SRG-56 protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
12	W01B6.4	W01B6.4	n/a	chrIV 10,075,527	contains similarity to Interpro domains IPR008962 (PapD-like), IPR000173 (Glyceraldehyde 3-phosphate dehydrogenase)
13	D2045.5	D2045.5	n/a	chrIII 10,468,691	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
14	T13C5.2	T13C5.2	n/a	chrX 6,186,424	contains similarity to Pfam domain PF03380 Caenorhabditis protein of unknown function, DUF282 contains similarity to Interpro domain IPR005044 (Protein of unknown function DUF282, Caenorhabditis species)
15	H05L14.1	H05L14.1	n/a	chrI 7,974,757	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
16	T19D2.3	T19D2.3	n/a	chrX 3,939,726
17	Y41C4A.1	Y41C4A.1	n/a	chrIII 11,648,712	contains similarity to Oryza sativa Putative aspartate kinase.; TR:Q851Z6
18	R04B5.1	R04B5.1	n/a	chrV 10,078,069	contains similarity to Culex nigripalpus baculovirus Putative 33 kDa early protein (CUN014 similar to AcMNPV ORF92).; TR:Q99GP2
19	F28H1.5	F28H1.5	n/a	chrI 3,979,010
20	K09F6.4	K09F6.4	n/a	chrII 2,263,817	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domain IPR003125 (Protein of unknown function WSN)
21	C55C3.3	C55C3.3	n/a	chrIV 5,686,761	contains similarity to Trypanosoma cruzi Trans-sialidase, putative.; TR:Q4E0H9
22	K10C9.7	K10C9.7	n/a	chrV 1,066,687
23	R09B5.12	R09B5.12	n/a	chrV 1,455,855	contains similarity to Interpro domains IPR011583 (Chitinase II), IPR017853 (Glycoside hydrolase, catalytic core)
24	srz-45	Y6G8.1	n/a	chrV 17,593,282	C. elegans SRZ-45 protein; contains similarity to Interpro domain IPR002229 (Blood group Rhesus C/E and D polypeptide)
25	F01D4.3	F01D4.3	n/a	chrIV 10,474,640	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR005819 (Histone H5), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site), IPR001984 (Peptidase S16, Lon protease)
26	F58G1.9	F58G1.9	n/a	chrII 12,924,971	contains similarity to Homo sapiens Adapter-related protein complex 4 mu 1 subunit; SW:O00189
27	F22B5.5	F22B5.5	n/a	chrII 8,453,880	contains similarity to Pfam domain PF06852 Protein of unknown function (DUF1248) contains similarity to Interpro domain IPR009658 (Protein of unknown function DUF1248)
28	ent-3	K02E11.1	n/a	chrV 14,234,164	C. elegans ENT-3 protein; contains similarity to Pfam domain PF01733 Nucleoside transporter contains similarity to Interpro domain IPR002259 (Delayed-early response protein/equilibrative nucleoside transporter)
29	C26B2.2	C26B2.2	n/a	chrIV 8,021,582
30	fbxa-96	H03G16.4	n/a	chrX 15,059,361	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
31	C53B4.2	C53B4.2	n/a	chrIV 8,966,964	contains similarity to Plasmodium vivax Sperm-specific protein Don juan, putative.; TR:A5K197
32	Y41C4A.11	Y41C4A.11	n/a	chrIII 11,721,632	Y41C4A.11 encodes a divergent paralog of F38E11.5, the beta' (beta-prime) subunit of the coatomer (COPI) complex; unlike F38E11.5, Y41C4A.11 has no obvious function in mass RNAi assays.
33	col-53	M01A12.1	n/a	chrI 5,645,857	C. elegans COL-53 protein; contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies) contains similarity to Interpro domains IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat)
34	C14A4.13	C14A4.13	n/a	chrII 10,619,389	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
35	C36F7.5	C36F7.5	n/a	chrI 9,575,404	contains similarity to Pfam domain PF03057 Protein of unknown function contains similarity to Interpro domains IPR004296 (Protein of unknown function DUF236), IPR003979 (Tropoelastin), IPR013286 (Annexin, type VII)
36	B0207.1	B0207.1	n/a	chrI 5,966,138	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR000387 (Protein-tyrosine phosphatase), IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000005 (Helix-turn-helix, AraC type), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000694 (Proline-rich region), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
37	W01B11.1	W01B11.1	n/a	chrI 3,300,049	contains similarity to Interpro domain IPR000694 (Proline-rich region)
38	Y39A1A.18	Y39A1A.18	n/a	chrIII 10,692,438	contains similarity to Methanosarcina mazei Transcriptional regulator, MerR family.; TR:Q8PSB2
39	T09B4.3	T09B4.3	n/a	chrI 6,177,087
40	Y51A2D.18	Y51A2D.18	n/a	chrV 18,484,174	contains similarity to Pfam domains PF07690 (Major Facilitator Superfamily) , PF00083 (Sugar (and other) transporter) contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR001991 (Sodium:dicarboxylate symporter), IPR011701 (Major facilitator superfamily MFS-1), IPR005829 (Sugar transporter, conserved site), IPR005828 (General substrate transporter), IPR003663 (Sugar transporter), IPR016196 (MFS general substrate transporter)
41	K10G9.1	K10G9.1	n/a	chrIII 10,296,799	contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
42	nas-5	T23H4.3	n/a	chrI 9,887,167	nas-5 encodes an astacin-like metalloprotease; loss of nas-5 activity in an RNAi hypersensitive strain results in axon guidance defects, including a failure of DD/VD motoneuron commissures to reach the dorsal cord, defasciculation of the dorsal nerve cord, and midline crossing defects in the ventral nerve cord.
43	C56A3.3	C56A3.3	n/a	chrV 13,533,300	C56A3.3 encodes a homolog of the functionally active Fmrf Receptor (FR; CG2114) of D. melanogaster; it is thus possible that C56A3.3 is a receptor for one of the FMRF-like neurotransmitters in C. elegans (e.g., FLP-1 through FLP-12).
44	D2062.6	D2062.6	n/a	chrII 2,619,582	contains similarity to Interpro domain IPR000104 (Antifreeze protein, type I)
45	C18H2.3	C18H2.3	n/a	chrIII 7,685,691	contains similarity to Pfam domains PF00023 (Ankyrin repeat) (2), PF00533 (BRCA1 C Terminus (BRCT) domain) (2)contains similarity to Interpro domains IPR002110 (Ankyrin), IPR001357 (BRCT)
46	Y57G7A.5	Y57G7A.5	n/a	chrII 1,274,377
47	C42C1.3	C42C1.3	n/a	chrIV 12,269,969	contains similarity to Trypanosoma cruzi Hypothetical protein.; TR:Q4CVC5
48	Y37D8A.8	Y37D8A.8	n/a	chrIII 12,867,161	contains similarity to Interpro domain IPR006629 (LPS-induced tumor necrosis factor alpha factor)
49	K01D12.15	K01D12.15	n/a	chrV 12,386,487	contains similarity to Interpro domains IPR001859 (Ribosomal protein P2), IPR000976 (Wilm's tumour protein)
50	clec-236	Y70C5C.5	n/a	chrV 16,720,176	C. elegans CLEC-236 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)