UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	C18H7.7	C18H7.7	9.999999999999999e-101	chrIV 596,081
2	skr-9	C52D10.7	n/a	chrIV 17,163,837	skr-9 encodes a homolog of Skp1 in S. cerevisiae, a component of the SCF (Skp1, Cullin, F-box) ubiquitin-ligase complex that regulates ubiquitin-mediated protein degradation; SKR-9 is required for posterior body morphogenesis, embryonic and larval development, and postembryonic cell proliferation.
3	kin-26	T06C10.6	n/a	chrIV 7,876,748	C. elegans KIN-26 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
4	C27B7.6	C27B7.6	n/a	chrIV 8,904,670	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR000694 (Proline-rich region), IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
5	T05C12.9	T05C12.9	n/a	chrII 8,192,426	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF02149 (Kinase associated domain 1) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR001772 (Kinase-associated KA1), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR015940 (Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)
6	F35C5.1	F35C5.1	n/a	chrII 12,881,287	contains similarity to Saccharomyces cerevisiae B-type regulatory subunit of protein phosphatase 2A (PP2A); SGD:YOR014W
7	F01D4.3	F01D4.3	n/a	chrIV 10,474,640	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR005819 (Histone H5), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site), IPR001984 (Peptidase S16, Lon protease)
8	Y45F10B.2	Y45F10B.2	n/a	chrIV 13,595,366	contains similarity to Mycoplasma pulmonis Hypothetical protein MYPU_6700.; TR:Q98PP9
9	Y116A8C.38	Y116A8C.38	n/a	chrIV 17,132,537	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
10	C15H11.1	C15H11.1	n/a	chrV 14,394,129	contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain) , PF02932 (Neurotransmitter-gated ion-channel transmembrane region) contains similarity to Interpro domains IPR002394 (Nicotinic acetylcholine receptor, N-terminal), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding), IPR006029 (Neurotransmitter-gated ion-channel transmembrane region)
11	ani-1	Y49E10.19	n/a	chrIII 12,449,658	ani-1 encodes one of three C. elegans anillins; ANI-1 activity is required in the early embryo for cortical contractile events, including polar body extrusion, membrane ruffling, and pseudocleavage; at later stages of development, ANI-1 also plays a role in cuticle formation, coordinated locomotion, vulval development, and male tail formation; in regulating cortical events, ANI-1 appears to function by positively regulating septin (UNC-59 and UNC-61) localization to the contractile ring as well as formation of septin- and NMY-2-containing cortical patches; in telophase embryos, ANI-1 localizes to the cell cortex and cleavage furrow.
12	scrm-6	F46A8.10	n/a	chrI 11,254,608	scrm-6 encodes a putative phospholipid scramblase homologous to human PLSCR1-5, and paralogous to other C. elegans SCRMs (e.g., SCRM-1); scrm-6(RNAi) animals have no obvious phenotype.
13	K05F1.1	K05F1.1	n/a	chrII 5,802,499	contains similarity to Pfam domain PF01666 DX module contains similarity to Interpro domain IPR002593 (Protein of unknown function DX)
14	W07G4.2	W07G4.2	n/a	chrV 13,035,710	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domains IPR006583 (CW), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
15	R09E10.3	R09E10.3	n/a	chrIV 10,312,202	contains similarity to Pfam domain PF00501 AMP-binding enzyme contains similarity to Interpro domain IPR000873 (AMP-dependent synthetase and ligase)
16	C32D5.4	C32D5.4	n/a	chrII 6,322,171
17	B0432.11	B0432.11	n/a	chrII 294,279	contains similarity to Interpro domain IPR000795 (Protein synthesis factor, GTP-binding)
18	Y23H5A.4	Y23H5A.4	n/a	chrI 2,618,955	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
19	C24D10.1	C24D10.1	n/a	chrIV 5,167,373	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
20	K03H1.9	K03H1.9	n/a	chrIII 9,941,014	contains similarity to Homo sapiens DAN15 protein; TR:Q99491
21	Y40H4A.2	Y40H4A.2	n/a	chrV 14,584,349	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
22	clec-261	ZC15.6	n/a	chrV 20,287,601	C. elegans CLEC-261 protein; contains similarity to Interpro domains IPR000817 (Prion protein), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
23	T19D2.3	T19D2.3	n/a	chrX 3,939,726
24	Y70G10A.2	Y70G10A.2	n/a	chrIII 10,229,611	contains similarity to Pfam domains PF00008 (EGF-like domain) , PF07974 (EGF-like domain) contains similarity to Interpro domains IPR000742 (EGF-like, type 3), IPR006209 (EGF-like), IPR006210 (EGF), IPR013032 (EGF-like region, conserved site), IPR013111 (EGF, extracellular)
25	dlc-6	Y106G6G.3	n/a	chrI 10,323,861	dlc-6 encodes a putative dynein light chain 1; DLC-6 is orthologous to human DYNLL1 (OMIM:601562) and DYNLL2 (OMIM:608942), but much more divergent from them than its paralog DLC-1; DLC-6's other paralogs are DLC-2/-5; DLC-6 has no obvious function in mass RNAi assays.
26	C46E10.1	C46E10.1	n/a	chrII 3,725,048	contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316) contains similarity to Interpro domain IPR005514 (Protein of unknown function DUF316)
27	ZC581.2	ZC581.2	n/a	chrI 6,656,611	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
28	T05D4.5	T05D4.5	n/a	chrIII 13,582,099	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein), IPR000533 (Tropomyosin)
29	AC7.3	AC7.3	n/a	chrIV 5,112,248
30	T09A12.1	T09A12.1	n/a	chrIV 8,245,495	contains similarity to Xenopus laevis DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I).; SW:P41512
31	M162.7	M162.7	n/a	chrV 19,789,204	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domain IPR003125 (Protein of unknown function WSN)
32	Y45F10B.3	Y45F10B.3	n/a	chrIV 13,593,732	contains similarity to Saccharomyces cerevisiae N-terminal domain appears to be involved in cellular responsiveness to RAS.; SGD:YNL138W
33	ech-3	F43H9.1	n/a	chrV 8,022,781	C. elegans ECH-3 protein; contains similarity to Pfam domain PF00378 Enoyl-CoA hydratase/isomerase family contains similarity to Interpro domain IPR001753 (Crotonase, core)
34	W06F12.3	W06F12.3	n/a	chrIII 13,735,661	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
35	C46H11.6	C46H11.6	n/a	chrI 5,022,021	contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)
36	clec-99	ZK39.8	n/a	chrI 11,157,780	C. elegans CLEC-99 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
37	C09B9.4	C09B9.4	n/a	chrIV 5,032,484	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
38	R102.7	R102.7	n/a	chrIV 10,703,834
39	Y45F10B.8	Y45F10B.8	n/a	chrIV 13,577,771	contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger) contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR000533 (Tropomyosin)
40	F46F5.6	F46F5.6	n/a	chrII 814,673	contains similarity to Interpro domain IPR000104 (Antifreeze protein, type I)
41	C08E8.3	C08E8.3	n/a	chrV 18,351,418	contains similarity to Clostridium perfringens Probable Ser-type protease.; TR:Q8XHC4
42	srv-12	T04B2.4	n/a	chrIV 10,052,440	C. elegans SRV-12 protein ;
43	ZK930.4	ZK930.4	n/a	chrII 11,908,092	contains similarity to Homo sapiens Similar to hypothetical protein FLJ20094; ENSEMBL:ENSP00000324274
44	K10H10.7	K10H10.7	n/a	chrII 14,507,311	contains similarity to Pfam domain PF07491 Protein phosphatase inhibitor contains similarity to Interpro domain IPR011107 (Protein phosphatase inhibitor)
45	F41D3.7	F41D3.7	n/a	chrI 12,267,272	contains similarity to Autographa californica nuclear polyhedrosis virus ORF 5 (Fragment).; TR:O71053
46	gcy-12	F08B1.2	n/a	chrII 5,314,665	gcy-12 encodes a membrane guanylyl cyclase; a gcy-12::GFP reporter is expressed in the PHA neurons as well as in a number of head sensory neurons including AFD, AWC, and ASE; when expressed in COS-M6 cells, GCY-12 exhibits temperature-dependent guanylyl cyclase activity.
47	C01B12.4	C01B12.4	n/a	chrII 7,948	contains similarity to Interpro domain IPR005178 (Protein of unknown function DUF300)
48	C32H11.9	C32H11.9	n/a	chrIV 12,935,630	contains similarity to Pfam domain PF02408 CUB-like domain contains similarity to Interpro domain IPR003366 (CUB-like region)
49	T15H9.5	T15H9.5	n/a	chrII 9,610,953	contains similarity to Dictyostelium discoideum Putative uncharacterized protein.; TR:Q55FI4
50	tba-6	F32H2.9	n/a	chrI 8,996,289	C. elegans TBA-6 protein; contains similarity to Pfam domains PF00091 (Tubulin/FtsZ family, GTPase domain) , PF03953 (Tubulin/FtsZ family, C-terminal domain) contains similarity to Interpro domains IPR002454 (Gamma tubulin), IPR002452 (Alpha tubulin), IPR002453 (Beta tubulin), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase), IPR004057 (Epsilon tubulin), IPR002967 (Delta tubulin), IPR000158 (Cell division protein FtsZ, N-terminal), IPR008280 (Tubulin/FtsZ, C-terminal)