UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	C17H12.12	C17H12.12	0	chrIV 6,796,979	contains similarity to Pfam domain PF00651 BTB/POZ domain contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)
2	ZK354.3	ZK354.3	n/a	chrIV 5,310,807	contains similarity to Interpro domains IPR000533 (Tropomyosin), IPR005448 (Voltage-dependent calcium channel, P/Q-type, alpha-1 subunit), IPR005398 (Tubby, N-terminal)
3	K06A5.3	K06A5.3	n/a	chrI 6,467,184	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
4	F20D6.6	F20D6.6	n/a	chrV 8,160,713	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
5	M88.3	M88.3	n/a	chrIII 4,544,265	contains similarity to Interpro domain IPR001841 (Zinc finger, RING-type)
6	C09H5.7	C09H5.7	n/a	chrV 8,084,660	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
7	Y44A6D.5	Y44A6D.5	n/a	chrV 20,797,500	contains similarity to Pfam domain PF01063 Aminotransferase class IV contains similarity to Interpro domains IPR001544 (Aminotransferase, class IV), IPR005786 (Branched-chain amino acid aminotransferase II)
8	C10G11.8	C10G11.8	n/a	chrI 6,272,876	contains similarity to Pfam domain PF00004 ATPase family associated with various cellular activities (AAA) contains similarity to Interpro domains IPR003959 (AAA ATPase, core), IPR001270 (Chaperonin clpA/B), IPR003960 (AAA ATPase, conserved site), IPR005937 (26S proteasome subunit P45), IPR001957 (Bacterial chromosomal replication initiator protein, DnaA), IPR003593 (AAA+ ATPase, core)
9	F36A2.11	F36A2.11	n/a	chrI 8,822,940	contains similarity to Pyrococcus furiosus Hypothetical protein PF2017.; TR:Q8TZH6
10	Y38H8A.3	Y38H8A.3	n/a	chrIV 13,473,210	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
11	C34D4.2	C34D4.2	n/a	chrIV 7,155,353	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
12	F55C5.2	F55C5.2	n/a	chrV 12,264,926	contains similarity to Pfam domain PF03009 Glycerophosphoryl diester phosphodiesterase family contains similarity to Interpro domain IPR004129 (Glycerophosphoryl diester phosphodiesterase)
13	F01D5.8	F01D5.8	n/a	chrII 14,012,415	contains similarity to Pfam domain PF02230 Phospholipase/Carboxylesterase contains similarity to Interpro domains IPR003140 (Phospholipase/carboxylesterase), IPR008262 (Lipase, active site), IPR003089 (Alpha/beta hydrolase)
14	F57B9.8	F57B9.8	n/a	chrIII 6,934,439	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
15	K07A1.5	K07A1.5	n/a	chrI 9,591,179	contains similarity to Pfam domain PF03057 Protein of unknown function contains similarity to Interpro domains IPR004296 (Protein of unknown function DUF236), IPR001859 (Ribosomal protein P2), IPR003060 (Pyocin S killer protein)
16	F36H12.3	F36H12.3	n/a	chrIV 5,273,494	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein), IPR005819 (Histone H5), IPR000533 (Tropomyosin)
17	C01G10.14	C01G10.14	n/a	chrV 15,105,627	contains similarity to Pfam domain PF03147 Ferredoxin-fold anticodon binding domain contains similarity to Interpro domain IPR005121 (Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding)
18	ZK637.15	ZK637.15	n/a	chrIII 8,920,543	contains similarity to Ureaplasma parvum Hypothetical membrane lipoprotein.; TR:Q9PQR8
19	R08C7.8	R08C7.8	n/a	chrIV 4,433,806	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR002048 (Calcium-binding EF-hand), IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
20	C34F11.5	C34F11.5	n/a	chrII 5,197,549	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
21	D1081.5	D1081.5	n/a	chrI 8,481,820	contains similarity to Interpro domain IPR009061 ()
22	C28D4.4	C28D4.4	n/a	chrIV 9,744,359	contains similarity to Pfam domain PF06852 Protein of unknown function (DUF1248) contains similarity to Interpro domains IPR016181 (Acyl-CoA N-acyltransferase), IPR009658 (Protein of unknown function DUF1248)
23	T25B9.4	T25B9.4	n/a	chrIV 10,756,710	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
24	spe-11	F48C1.7	n/a	chrI 5,331,412	spe-11 encodes a novel protein that is required for early embryonic development and for regulating the dynamic morphology of sperm pseudopods; although the precise biological role of SPE-11 is not yet known, SPE-11 is one of the few paternally provided proteins known to be essential for embryogenesis, and may constitute a sperm-associated factor required for oocyte activation; SPE-11 is first detected in the nuclei of primary spermatocytes and then remains tightly associated with sperm chromatin until fertilization at which point it appears to be degraded.
25	kin-5	T13H10.1	n/a	chrIV 9,968,114	kin-5 encodes a predicted protein tyrosine kinase that is most closely related to the non-receptor tyrosine kinases Fes/Fps and Fer that contain an SH2 domain and a tyrosine kinase domain (OMIM:190030, murine Fes appears to be required for hemopoietic homeostasis); as loss of kin-5 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of kin-5 in C. elegans development and/or behavior is not yet known.
26	M70.1	M70.1	n/a	chrIV 2,249,128	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domains IPR003004 (Bacterial general secretion pathway protein F), IPR003125 (Protein of unknown function WSN)
27	F26B1.1	F26B1.1	n/a	chrI 6,328,529	contains similarity to Homo sapiens hypothetical protein; ENSEMBL:ENSP00000352916
28	C50E10.1	C50E10.1	n/a	chrII 12,301,690	contains similarity to Gibberella zeae Hypothetical protein.; TR:Q4IR83
29	T21E12.5	T21E12.5	n/a	chrI 4,412,759
30	C17H12.3	C17H12.3	n/a	chrIV 6,794,555	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
31	C54G4.3	C54G4.3	n/a	chrI 8,005,688	contains similarity to Homo sapiens Myosin heavy chain, skeletal muscle, fetal; ENSEMBL:ENSP00000255381
32	B0511.11	B0511.11	n/a	chrI 10,649,379
33	ttr-9	C33A12.15	n/a	chrIV 9,505,947	C. elegans TTR-9 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)
34	spe-26	R10H10.2	n/a	chrIV 10,390,752	spe-26 encodes a Kelch motif-containing protein similar to the Drosophila proteins kelch and diablo and the Limulus (horseshoe crab) actin-bundling protein scruin; SPE-26 activity is required for several processes including embryogenesis, spermatogenesis, thermotolerance, and regulation of lifespan; SPE-26 mRNA is detected in spermatogonial cells and spermatocytes, but not in spermatids.
35	K08D8.5	K08D8.5	n/a	chrIV 12,911,360	contains similarity to Pfam domain PF02408 CUB-like domain contains similarity to Interpro domains IPR000859 (CUB), IPR003366 (CUB-like region)
36	T28F4.3	T28F4.3	n/a	chrI 7,485,104	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase), IPR000340 (Protein-tyrosine phosphatase, dual specificity)
37	C10H11.7	C10H11.7	n/a	chrI 4,720,444	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
38	C31H1.1	C31H1.1	n/a	chrIV 5,798,590	contains similarity to Staphylococcus aureus Serine-rich adhesin for platelets precursor (Staphylococcus aureusssurface protein A).; SW:Q8VQ99
39	F33D11.7	F33D11.7	n/a	chrI 5,850,957	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
40	Y106G6G.1	Y106G6G.1	n/a	chrI 10,329,688	contains similarity to Plasmodium falciparum Hypothetical protein.; TR:Q8I4Z6
41	M7.7	M7.7	n/a	chrIV 11,090,870	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
42	T04F3.3	T04F3.3	n/a	chrV 11,759,725	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
43	C18A3.7	C18A3.7	n/a	chrII 5,730,004	contains similarity to Homo sapiens Isoform 1 of Arginine/serine-rich coiled-coil protein 1; ENSEMBL:ENSP00000295930
44	F13G11.2	F13G11.2	n/a	chrIV 14,633,712	contains similarity to Rattus norvegicus Chondroadherin precursor (Cartilage leucine-rich protein).; SW:CHAD_RAT
45	cpb-2	C30B5.3	n/a	chrII 6,193,942	cpb-2 encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog, expressed specifically in the spermatogenic germ line; CPB-2 is dispensable for oogenesis, in contrast to CPEBs in vertebrates (Xenopus), arthropods (Drosophila), and molluscs (Spisula), which all participate in oogenesis.
46	M05B5.1	M05B5.1	n/a	chrI 7,178,689	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
47	C24A11.1	C24A11.1	n/a	chrI 5,402,352
48	K06H7.8	K06H7.8	n/a	chrIII 8,097,370	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
49	C50F2.5	C50F2.5	n/a	chrI 3,896,598	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
50	F42G4.6	F42G4.6	n/a	chrII 13,079,994	F42G4.6 encodes a nematode-specific sperm protein; F42G4.6 has no obvious non-nematode homologs, but does have a putative central coiled-coil domain, and is is paralogous to four other C. elegans proteins (B0207.11, F42G4.6, F44F4.10, T08G11.2, and Y81G3A.1); F42G4.6(RNAi) animals exhibit aldicarb resistance; F42G4.6 expression is enriched in spermatogenesis.