UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	C13G3.1	C13G3.1	6e-71	chrV 11,012,002	contains similarity to Arabidopsis thaliana Hypothetical protein.; TR:Q9LYL8
2	T22E5.3	T22E5.3	n/a	chrX 6,386,631	contains similarity to Pfam domains PF01682 (DB module) , PF00041 (Fibronectin type III domain) contains similarity to Interpro domains IPR008957 (Fibronectin, type III-like fold), IPR003961 (Fibronectin, type III), IPR002602 (Protein of unknown function DB), IPR007110 (Immunoglobulin-like)
3	D1022.3	D1022.3	n/a	chrII 7,455,664	contains similarity to Pfam domain PF01738 Dienelactone hydrolase family contains similarity to Interpro domain IPR002925 (Dienelactone hydrolase)
4	ugt-15	C44H9.1	n/a	chrV 12,828,911	C. elegans UGT-15 protein; contains similarity to Pfam domains PF04101 (Glycosyltransferase family 28 C-terminal domain) , PF00201 (UDP-glucoronosyl and UDP-glucosyl transferase) contains similarity to Interpro domains IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase), IPR007235 (Glycosyl transferase, family 28, C-terminal)
5	C31H5.6	C31H5.6	n/a	chrI 9,045,096	contains similarity to Pfam domains PF08840 (BAAT / Acyl-CoA thioester hydrolase C terminal) , PF04775 (Acyl-CoA thioester hydrolase / Bile acid-CoA amino acid N-acetyltransferase) contains similarity to Interpro domains IPR006862 (Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase), IPR014940 (BAAT/Acyl-CoA thioester hydrolase C-terminal), IPR016662 (Acyl-CoA thioesterase, long chain)
6	sra-24	T06G6.2	n/a	chrI 12,706,029	C. elegans SRA-24 protein; contains similarity to Pfam domain PF02117 C.elegans Sra family integral membrane protein contains similarity to Interpro domain IPR000344 (Nematode chemoreceptor, Sra)
7	C54D10.5	C54D10.5	n/a	chrV 12,430,253	contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
8	pqn-62	T03G11.1	n/a	chrX 5,200,980	The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
9	C44H9.8	C44H9.8	n/a	chrV 12,847,707	contains similarity to Bacillus anthracis Sensory box histidine kinase PhoR.; TR:Q81L02
10	clec-5	C35D10.14	n/a	chrIII 4,882,708	C. elegans CLEC-5 protein; contains similarity to Pfam domains PF00431 (CUB domain) , PF00059 (Lectin C-type domain) (2)contains similarity to Interpro domains IPR000859 (CUB), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR013838 (Beta tubulin, autoregulation binding site), IPR001304 (C-type lectin)
11	H37N21.1	H37N21.1	n/a	chrI 7,143,753	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001397 (5-Hydroxytryptamine 5A receptor), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
12	C08A9.6	C08A9.6	n/a	chrX 17,095,336	contains similarity to Pfam domain PF03353 DUF278 contains similarity to Interpro domain IPR005020 (Protein of unknown function DUF278)
13	nhr-161	C33G8.7	n/a	chrV 6,981,364	C. elegans NHR-161 protein; contains similarity to Pfam domain PF03171 2OG-Fe(II) oxygenase superfamily contains similarity to Interpro domains IPR006620 (Prolyl 4-hydroxylase, alpha subunit), IPR005123 (2OG-Fe(II) oxygenase)
14	srw-132	T05B4.5	n/a	chrV 4,107,240	C. elegans SRW-132 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
15	C01B7.7	C01B7.7	n/a	chrV 8,822,188	contains similarity to Pfam domain PF01579 Domain of unknown function DUF19 contains similarity to Interpro domains IPR016638 (Uncharacterised conserved protein UPF0376), IPR002542 (Protein of unknown function DUF19)
16	T23B3.6	T23B3.6	n/a	chrI 6,707,989
17	R13H4.5	R13H4.5	n/a	chrV 11,861,454	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
18	W03F9.1	W03F9.1	n/a	chrV 125,395	contains similarity to Pfam domain PF03367 ZPR1 zinc-finger domain contains similarity to Interpro domain IPR004457 (Zinc finger, ZPR1-type)
19	T10C6.2	T10C6.2	n/a	chrV 16,013,354	contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
20	W07A12.6	W07A12.6	n/a	chrII 9,158,925	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domain IPR002656 (Acyltransferase 3)
21	T22B2.3	T22B2.3	n/a	chrX 3,919,045
22	C54A12.3	C54A12.3	n/a	chrII 5,261,141
23	T09E11.10	T09E11.10	n/a	chrI 12,346,532	contains similarity to Pfam domain PF01762 Galactosyltransferase contains similarity to Interpro domain IPR002659 (Glycosyl transferase, family 31)
24	C07E3.5	C07E3.5	n/a	chrII 10,364,567	contains similarity to Pfam domain PF04942 CC domain contains similarity to Interpro domain IPR007026 (Domian of unknown function, DUF-CC)
25	F18E9.1	F18E9.1	n/a	chrX 8,601,003
26	W07B8.4	W07B8.4	n/a	chrV 1,131,011	contains similarity to Pfam domain PF00112 Papain family cysteine protease contains similarity to Interpro domains IPR013128 (Peptidase C1A, papain), IPR000169 (Peptidase, cysteine peptidase active site), IPR000668 (Peptidase C1A, papain C-terminal)
27	B0564.4	B0564.4	n/a	chrIV 13,112,036	contains similarity to Pfam domain PF01062 Bestrophin contains similarity to Interpro domain IPR000615 (Bestrophin)
28	T10E10.3	T10E10.3	n/a	chrX 6,313,109	contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
29	F10E9.1	F10E9.1	n/a	chrIII 8,323,702
30	F26D11.6	F26D11.6	n/a	chrV 7,955,880
31	clec-227	F08H9.5	n/a	chrV 14,473,432	C. elegans CLEC-227 protein; contains similarity to Pfam domains PF00431 (CUB domain) (2), PF00059 (Lectin C-type domain) contains similarity to Interpro domains IPR000859 (CUB), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
32	mec-4	T01C8.7	n/a	chrX 16,805,158	mec-4 encodes an amiloride-sensitive Na+ channel protein (degenerin) required to sense gentle mechanical stimuli (e.g. touch) along the body wall; MEC-4 is paralogous to, and coexpressed with, MEC-10, in all six touch cell neurons where they form a heteromeric mechanotransduction channel.
33	nas-28	F42A10.8	n/a	chrIII 6,182,093	C. elegans NAS-28 protein; contains similarity to Pfam domain PF01400 Astacin (Peptidase family M12A) contains similarity to Interpro domains IPR017050 (Peptidase M12A, astacin, nematode), IPR006025 (Peptidase M, neutral zinc metallopeptidases, zinc-binding site), IPR001506 (Peptidase M12A, astacin), IPR006026 (Peptidase, metallopeptidases), IPR000859 (CUB), IPR013032 (EGF-like region, conserved site)
34	ZC266.2	ZC266.2	n/a	chrV 4,696,862
35	Y32B12A.5	Y32B12A.5	n/a	chrV 16,487,248	contains similarity to Pfam domain PF04590 Protein of unknown function, DUF595 contains similarity to Interpro domain IPR007669 (Protein of unknown function DUF595)
36	aqp-5	C35A5.1	n/a	chrV 10,492,631	aqp-5 encodes a putative aquaporin with no known substrate, since AQP-5 expressed in Xenopus oocytes has no effect on water, glycerol, or urea permeability; AQP-5 also has no function in mass RNAi assays, perhaps reflecting genetic redundancy with its paralogs AQP-4 and AQP-6; AQP-5 is expressed in I1 and I2 pharyngeal interneurons, and is orthologous to human AQP8 (OMIM:603750).
37	C12D5.3	C12D5.3	n/a	chrV 7,676,566	contains similarity to Interpro domain IPR002194 (Chaperonin TCP-1, conserved site)
38	fbxb-68	F09C3.3	n/a	chrI 14,286,378	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function.
39	ZC266.1	ZC266.1	n/a	chrV 4,700,209
40	D1079.1	D1079.1	n/a	chrX 4,405,551
41	C31B8.1	C31B8.1	n/a	chrV 2,932,269
42	C43F9.4	C43F9.4	n/a	chrIV 10,588,322
43	R04B5.6	R04B5.6	n/a	chrV 10,086,268	contains similarity to Pfam domains PF00107 (Zinc-binding dehydrogenase) , PF08240 (Alcohol dehydrogenase GroES-like domain) contains similarity to Interpro domains IPR013027 (FAD-dependent pyridine nucleotide-disulphide oxidoreductase), IPR013149 (Alcohol dehydrogenase, zinc-binding), IPR011032 (GroES-like), IPR013154 (Alcohol dehydrogenase GroES-like), IPR002085 (Alcohol dehydrogenase superfamily, zinc-containing), IPR011597 (GroES-related), IPR016040 (NAD(P)-binding), IPR002328 (Alcohol dehydrogenase, zinc-containing, conserved site)
44	odr-10	C53B7.5	n/a	chrX 6,865,080	odr-10 encodes a member of the 7-transmembrane family of odorant receptors which affects chemotaxis to the volatile odorant diacetyl; ODR-10 is strongly expressed in the cilia of the AWA olfactory neurons and, at low levels, in the CEP neurons; expression of odr-10 mRNA and of an odr-10::GFP fusion gene is greatly reduced in odr-7 mutant animals, suggesting that odr-7, which encodes a predicted transcription factor, functions upstream of odr-10 in specifying AWA neuronal cell fate.
45	C16A3.6	C16A3.6	n/a	chrIII 6,379,994	contains similarity to Pfam domain PF04874 Mak16 protein contains similarity to Interpro domain IPR006958 (Mak16 protein)
46	C44H9.5	C44H9.5	n/a	chrV 12,849,210	contains similarity to Trypanosoma brucei Hypothetical leucine-rich repeat protein 1 (LRRP1).; TR:Q8WPS9
47	F15A8.7	F15A8.7	n/a	chrX 4,443,129	contains similarity to Interpro domain IPR006954 (Protein of unknown function DUF644)
48	clec-37	Y102A5B.3	n/a	chrV 16,851,225	C. elegans CLEC-37 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
49	Y6E2A.4	Y6E2A.4	n/a	chrV 15,713,920	contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core), IPR002219 (Protein kinase C, phorbol ester/diacylglycerol binding)
50	col-55	T05E7.2	n/a	chrI 6,199,669	C. elegans COL-55 protein; contains similarity to Pfam domain PF01484 Nematode cuticle collagen N-terminal domain contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal)