UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	C08H9.10	C08H9.10	0	chrII 9,854,672	contains similarity to Pfam domain PF00704 Glycosyl hydrolases family 18 contains similarity to Interpro domains IPR011583 (Chitinase II), IPR017853 (Glycoside hydrolase, catalytic core), IPR001223 (Glycoside hydrolase, family 18, catalytic domain), IPR013781 (Glycoside hydrolase, subgroup, catalytic core)
2	C17F3.3	C17F3.3	n/a	chrI 6,682,871	contains similarity to Interpro domains IPR000956 (Stathmin), IPR005819 (Histone H5), IPR000533 (Tropomyosin), IPR005398 (Tubby, N-terminal)
3	W03D8.5	W03D8.5	n/a	chrI 2,817,203	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
4	C47A4.3	C47A4.3	n/a	chrIV 13,741,621	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
5	Y43F8A.2	Y43F8A.2	n/a	chrV 19,373,855	contains similarity to Homo sapiens Cytokine receptor common beta chain precursor; ENSEMBL:ENSP00000262825
6	C38C3.8	C38C3.8	n/a	chrV 1,505,005	contains similarity to Ascaris suum MFP2b.; TR:Q7YXJ9
7	K08C9.1	K08C9.1	n/a	chrI 11,485,648
8	T22C1.9	T22C1.9	n/a	chrI 7,959,350	contains similarity to Saccharomyces cerevisiae Nuclear Assembly Factor; SGD:YNL124W
9	ZC412.5	ZC412.5	n/a	chrV 14,874,791
10	F10E9.2	F10E9.2	n/a	chrIII 8,313,421	contains similarity to Interpro domain IPR001841 (Zinc finger, RING-type)
11	ZK1307.3	ZK1307.3	n/a	chrII 9,652,584	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
12	R02F2.5	R02F2.5	n/a	chrIII 5,479,799	contains similarity to Interpro domains IPR003267 (Small proline-rich), IPR000694 (Proline-rich region)
13	C38C3.3	C38C3.3	n/a	chrV 1,497,058
14	F44G4.5	F44G4.5	n/a	chrII 8,999,996	contains similarity to Anabaena sp Endopeptidase Clp ATP-binding chain B.; TR:Q8YM56
15	W02A2.8	W02A2.8	n/a	chrIV 13,356,775
16	T05D4.5	T05D4.5	n/a	chrIII 13,582,099	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein), IPR000533 (Tropomyosin)
17	F47B3.2	F47B3.2	n/a	chrI 3,970,840	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
18	C52E4.7	C52E4.7	n/a	chrV 11,995,047	C52E4.7 encodes a member of the histidine phosphatase superfamily orthologous to Bombyx mori ecdysteroid phosphate phosphatase (EPP), human STS1 (OMIM:609201) and human UBASH3A (OMIM:605736); C52E4.7 is also paralogous to C. elegans F09C12.8, F53B6.7, F55A11.11, and T07F12.1; while no explicit prediction has been made for C52E4.7's activity, it might be catalytically inactive; as loss of C52E4.7 activity results in no obvious defects, the precise role of C52E4.7 in C. elegans development and/or behavior is not yet known.
19	K09G1.2	K09G1.2	n/a	chrV 9,590,914	contains similarity to Carnobacterium piscicola Putative ABC transporter PisT.; TR:Q93QC9
20	F52F12.5	F52F12.5	n/a	chrI 9,921,559	contains similarity to Homo sapiens Triadin; ENSEMBL:ENSP00000329278
21	Y106G6D.3	Y106G6D.3	n/a	chrI 10,113,137	contains similarity to Ensis minor Nuclear protein.; TR:Q24898
22	T08B6.4	T08B6.4	n/a	chrIV 4,907,072	contains similarity to Interpro domain IPR000694 (Proline-rich region)
23	ZC262.4	ZC262.4	n/a	chrIII 8,333,867
24	F36H12.4	F36H12.4	n/a	chrIV 5,269,346
25	F23C8.7	F23C8.7	n/a	chrI 2,423,740	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
26	T04A6.3	T04A6.3	n/a	chrIII 7,608,687	contains similarity to Interpro domain IPR006121 (Heavy metal transport/detoxification protein)
27	Y40H4A.2	Y40H4A.2	n/a	chrV 14,584,349	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
28	C15A11.2	C15A11.2	n/a	chrI 7,388,033	contains similarity to Cryptosporidium hominis Putative uncharacterized protein.; TR:Q5CF92
29	T05A7.6	T05A7.6	n/a	chrII 4,670,226	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
30	C47E8.1	C47E8.1	n/a	chrV 14,666,582
31	C18E9.8	C18E9.8	n/a	chrII 8,986,939	C18E9.8 is orthologous to the human gene JOINED TO JAZF1 (JJAZ1; OMIM:606245), which when mutated leads to disease.
32	fbxa-178	F17A9.1	n/a	chrV 6,116,834	F17A9.1 encodes a divergent ONECUT class CUT homeobox protein with a single N-terminal cut domain; F17A9.1 has an atypical tyrosine residue at position 48 of its homeodomain rather than a phenylalanine or tryptophan residue; the cut domain may be a compact DNA-binding domain composed of alpha helices; phylogenetically, F17A9.1 is (somewhat distantly) affiliated with C17H12.9, Drosophila ONECUT, and mammalian HNF6 proteins; F17A9.1 has no obvious function in mass RNAi assays.
33	T04A8.13	T04A8.13	n/a	chrIII 4,709,804	contains similarity to Interpro domain IPR000694 (Proline-rich region)
34	F38A5.8	F38A5.8	n/a	chrIV 6,600,170
35	clec-153	F10F2.8	n/a	chrIII 4,636,376	C. elegans CLEC-153 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
36	C25A8.2	C25A8.2	n/a	chrIV 7,010,276	contains similarity to Interpro domains IPR005819 (Histone H5), IPR000079 (High mobility group protein HMG14 and HMG17)
37	C50D2.3	C50D2.3	n/a	chrII 106,848	contains similarity to Pfam domain PF00595 PDZ domain (Also known as DHR or GLGF) contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)
38	M162.7	M162.7	n/a	chrV 19,789,204	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domain IPR003125 (Protein of unknown function WSN)
39	ZK84.2	ZK84.2	n/a	chrII 6,015,055
40	mab-9	T27A1.6	n/a	chrII 518,813	mab-9 encodes a member of the T-box family of transcriptional regulators containing a 200-amino acid T-box DNA-binding domain most similar to mouse Brachyury; mab-9 is involved in hindgut and male tail development, specifically affecting the fate of two posterior blast cells in the hindgut, B and F; in the male this results in a grossly abnormal tail lacking spicules, and renders them incapable of mating; in the hermaphrodite this results in hindgut defects; mab-9 may also be part of a network of T-box genes that includes tbx-8, tbx-9 and vab-7 and is important for the correct patterning of posterior cells in the developing embryo; mab-9 affects movement to some extent though the basis for this defect is unknown; MAB-9 localizes to the nucleus of B and F and their descendents during development.
41	R04B5.11	R04B5.11	n/a	chrV 10,090,998	contains similarity to Homo sapiens Hypothetical protein; ENSEMBL:ENSP00000248104
42	C09B9.4	C09B9.4	n/a	chrIV 5,032,484	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
43	C24A11.1	C24A11.1	n/a	chrI 5,402,352
44	R10D12.10	R10D12.10	n/a	chrV 13,957,221	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
45	T02E1.7	T02E1.7	n/a	chrI 8,209,741	contains similarity to Pfam domain PF02077 SURF4 family contains similarity to Interpro domains IPR002995 (Surfeit locus 4), IPR011592 (Surfeit locus 4-related)
46	T13F2.12	T13F2.12	n/a	chrIV 9,765,986	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
47	W06D4.3	W06D4.3	n/a	chrI 9,059,663	contains similarity to Pfam domain PF03114 BAR domain contains similarity to Interpro domain IPR004148 (BAR)
48	B0511.11	B0511.11	n/a	chrI 10,649,379
49	ZK930.4	ZK930.4	n/a	chrII 11,908,092	contains similarity to Homo sapiens Similar to hypothetical protein FLJ20094; ENSEMBL:ENSP00000324274
50	F47B3.1	F47B3.1	n/a	chrI 3,972,934	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)