Affine Alignment
 
Alignment between sre-32 (top W05H5.7 361aa) and sre-41 (bottom Y57A10B.5 360aa) score 6555

001 MIIKILDPSKNATYLWLPVY-FYDEPFQFQI--LSSIIELVFYISCFHLMTISLYVMLKV 057
    |||  |+ ++    ||+||+   |  ++  |    + |+++ | |  +++  +  ++ |+
001 MIIAFLNSTET---LWIPVFSLNDRVYESPIYPFFAAIQILIYCSTAYIIVRTCKIITKI 057

058 QIFHRNLYILYIPMFCVWYGLIAGKLITIAYRLKFVDLDYELGE-HIAMWTDDQAKMLHV 116
    ++|| |  ||     | |+  |  |++ + |++  + +    |+ + + |+  +  |+ |
058 RLFHENKNILMAFFLCQWFEAILAKILILPYQIGLIQIGNSPGKSYFSWWSSGRNDMVLV 117

117 SSLRGLELLIFGGFVQWHYMYTVVYGILGVAAERAIASVLIENYETNTQLYIPIALTIIT 176
     |   + +|    +|  |||+++ +||+ +  ||| |+  | +||   + +||+ | |+ 
118 ESTDDIRVLYIACYVYRHYMFSMFFGIMAIGVERACATFYIHDYEHVRRRHIPVILIILV 177

177 QFLAISTSLSVLFHKASVFLSHLPWIISCSLGALAYLFIKIVNENFQKQI-TNPRRKRLF 235
      + |     |+ ++    + +  | +   |   ||  |  +|  |+ |+  |      +
178 NIITIPYVYFVIHNRIPFLVVYGQWAVCIVLSTSAYATILRINFVFRNQMRKNITDHEKY 237

236 TISQQFQVKENLRALRLG--TRLVFVVFFYVAFVSFGMFALA-FDLVSSAYCHFVENFLF 292
    +++++|||+||+|+|+|   | ||  |   +  + |    |  |+ +   + | +|| + 
238 SLARKFQVEENIRSLKLAKYTVLVGSVHISLTLLVFTCLMLGFFERLQVFFVHILENLIL 297

293 LNPYPICFTAMLTIPHWRKHFQNACFTWRLVKSAWTKPKTSTTSVEISTTKK-LEAETDL 351
    |    +    +     ||  |               |  + |+ + || +++ +  |+++
298 LPALVMAVALLCCSVAWRHEFMQKL-------PVLGKHISGTSRIGISESRRSVVLESEV 350

352 YFRQLNESW 360
    ||+||  ||
351 YFQQLRSSW 359