Affine Alignment
 
Alignment between nhr-135 (top VC5.5 362aa) and nhr-257 (bottom C17A2.1 331aa) score 3268

005 PCFVCNSP-ANECHFGSRSQICRACSAFFRRYVLSPKSAIKCRKDKSCRIHYKDPKICRF 063
    || +|| |     |||  + +| ||++|| |  +      +|  +  | |       || 
007 PCRICNDPETTSPHFG--AIVCTACASFFGRTTV---DKFRCIANNKCVISCAKKITCRS 061

064 CRMERCVLAGMK---TTAVQPPREKYSEDRGDSETSSCYSSSP-YTHEVQ---SCSRDIP 116
    || + |+ |||       ++ |+++  ++   ++|       | +| |     |   ++|
062 CRYDSCIRAGMNKFYIRKIKAPKQQVIQEVDQNKTFPNSEMLPNFTRENSHKFSEVLNLP 121

117 RLHRLSVHFKNLESVRKLEFQNQEPPKSRNMVELIEILKKDMRLVSTFIDGAYPE----I 172
        |  + | +|    |+ +|     |+|++    |   |+ ++|  + |+  |     
122 NNEILQFYVKEVEKSLSLKKRN----FSKNILNAESI--NDLLIISAHLTGSAMESCFQC 175

173 GKLGHLEKK--QVFLNFFIKYMLVEPPFLSI-SAGRKEMMLPNGDHYDEDLGAFYSTINV 229
      +  |||+  |||| +|         | ++     +|  | +  |  |      |  + 
176 PGINLLEKEDIQVFLRYF--------EFSNVWIDSLREYSLMSHSHNKE-----ISRTDK 222

230 KKEEAVHLFKPYWDEYKRTVIDDVSFLKPDVYEFLTVSGLILWDTGLDGLSDQSIEICRA 289
    |  + +       ++ | |+   +  || ++|||       +|+      |     + + 
223 KVMKFI-------NQVKSTLGTALIHLKLNIYEFAAFKSFCIWNIKFHKTSQTMRIVAQG 275

290 MREKLVGEIHFYYKNVKKLDDP--CLRLGQIMMILSSV 325
        +   +  ||||  || |    +|+| | + +++|
276 HYVAVSSALRVYYKNQLKLSDMEIAIRIGDITLQIATV 313