Affine Alignment
 
Alignment between str-166 (top T08B6.6 342aa) and str-248 (bottom C55A1.3 360aa) score 6308

005 NNLNLLLQCSSLICAIVFNSLLIYLIITKSPKKMGNYKALMIYFSTFSMVFAVIDMIVQP 064
    +|   + | +     +  ||+|  ||+ |||||+|||| ||+| | | ++++++|    |
003 SNYREIFQRTCAFLGLFNNSILALLILYKSPKKLGNYKYLMMYISIFEIIYSLLDFSTVP 062

065 FIHSYGSCFFMIM--------------SIKDWPFTVEMAQIALSIL-CGCGGVTPFLIAI 109
     | |  | | + +              ++ ++|    + +  +|++ |   |++  + ||
063 EIFSKDSAFLITIEKRLAVLPDIALQFALSEFPVKCRLLKFEISVVFCSLFGMSMAIFAI 122

110 HFIYRFFALERKGNLKYFSGTYLFMWFLIPIAGGINWFHLSWFYYRRNDK----TTEYIK 165
    ||+||+  +     +|      +       +  |+ |  |   ++         | ||+|
123 HFVYRYLVMTGSHFIKTRHLLKVISLIGFTLCIGVVWSFLCILFHPIPQADLILTQEYLK 182

166 EAVLENFGLHMNETVYSAALFYPADEHGVPNLD------IKIFISYVILSFSMVIPFAVM 219
            | + |  |    |   || || +|+      | |    + |||  |      
183 PR-----NLQLAEIDYLGPCFQVQDEKGVYHLNWDAAGPIGIMTVLIGLSFITVFYCGYS 237

220 LVAGVKSHSQIKKLIEQGECDYTKRLQLQLYKALLVQTFLPIFLFFMP--MGALFSAPLF 277
    +   +|| + ++  ++         || ||+ ||+ || +|+ |  +|  +| |||  +|
238 IYRNIKSMAAMRSSVDHS-------LQSQLFYALVFQTLIPVILMHIPASLGFLFS--MF 288

278 HIDIGSWSYLTTYLYALYPAVDPLPIMFIVQEYRNAFIELFDCFRCSP 325
       |  +  | |+   ||| +||||  ||++ || | ++ | ||   |
289 GQSILFFGELPTFSVFLYPILDPLPNFFIIRSYRQAILDFFGCFLRKP 336