Affine Alignment
 
Alignment between srd-2 (top R05H5.1 347aa) and srj-4 (bottom C27A7.7 336aa) score 2489

039 NAILIYLIWKRTPIQMRSYAIYILNFALFDFATCIISFFSCQQVIFSDFS-----LVYIF 093
    |+| ||++   |   + +|   ++ | |||     +       |     |      |++ 
023 NSIFIYVVLLNTRANIGAYKYMLVCFGLFDITYSTVDML----VAMGSHSEGNTFCVFVT 078

094 HGP-CKYVSPWFCYFCHCFMCHALAHSQWILLGSFIYRYRVLTGETPTAK------DLIR 146
    |||   |+   |  |  |  |   + |  +|   |||||  |      +        || 
079 HGPFSNYLDLGF--FAPCVRCMFFSLSYGVLELHFIYRYVALCYPKRLSHFGDPKWILIM 136

147 NSVALYSMSLCFLLVYVFDNSDSDLLFQILTRVHPEYHYDDESIWKKSIVVSGNISAFAP 206
     |       | |  ||     ||+    ++     +|+ |   |   +    |  +    
137 ISAVFGQGLLWFFSVYFLMWPDSETRSYLVIPFRRDYNADVHKIPLLASTYWGASTQLIL 196

207 ITLISILYMT-IPCVPI-YCAILYFRHNTRVILNNPHINLSPTAKSNHVKLIRALTVQAG 264
     |  +|+ +| | |  | +|  + +   +++ +     ++| | |  |  |++|| +|  
197 RTSTAIIIVTLISCFTICFCIWIGWTIQSKLKV----ADMSKTTKRMHRNLLKALAIQTF 252

265 IP--IFWLVASGIFTMSQFGIIGGPIPENITFRLMDCIPLISPIVTIIFVQPYREGLLKV 322
    ||  | ++     +++    +    +    +   +   | | |+  ++|+  ||+   |+
253 IPFAISYIPCVVAWSVPIIHVDTKSLNNYTSIIAVAAFPFIDPLAIMVFLPEYRKLFTKI 312

323 LLKNSGLFVPNIIGSSIV 340
           |+| +  || |
313 -------FLPFLYNSSTV 323