Affine Alignment
 
Alignment between ttr-1 (top K03H1.6 156aa) and ttr-5 (bottom C40H1.5 139aa) score 4617

001 MKIALSFLFLTSTFSNAGKIGRLQSVAVSGQLNCLGKPAVGVRIDLMESDNNGEETGIID 060
    ||+ +    + |+++    ||  ||  | |+| | ||||||| + | + |        ||
001 MKLIILLCLVASSYA---LIGNTQSAGVRGKLICNGKPAVGVLVKLYDDDRG------ID 051

061 DNDFMGYTYTDSAGFFNMSGSEVEISGIEPYVNIFHKCNDGLSPCQRQLRVDIPKSATAS 120
     +| |    |+  | | +|| | |++ |+| +||+| ||||+ ||||+  + || |    
052 ADDLMASGKTNGNGDFEISGHEDEVTPIDPKLNIYHDCNDGIKPCQRKFTIKIPDSYINK 111

121 GPAPNETFSIGTLELSSRKVIGERRSCAY 149
    |      +  | ++|+     || | | +
112 GKTVRNIYDAGVIQLAG-SFPGEGRDCLH 139