Affine Alignment
 
Alignment between cpr-4 (top F44C4.3 335aa) and cpr-1 (bottom C52E4.1 329aa) score 17860

001 MKYLILAALVAVTAGLV-----IPLVPKTQEAITEYVNSKQSLWKAEIPKDITIEQVKKR 055
    ||+||| || |||   |       +   | +|+ +|||| |||+| |   +|| |++| +
001 MKFLILTALCAVTLAFVPINHQSAVETLTGQALVDYVNSAQSLFKTE-HVEITEEEMKFK 059

056 LMRTEFVAPHTPDVEVVKHDINEDTIPATFDARTQWPNCMSINNIRDQSDCGSCWAFAAA 115
    ||  ++ | |+ ++   + ++   ++|||||+||||  | ||  ||||+ ||||||| ||
060 LMDGKYAAAHSDEIRATEQEVVLASVPATFDSRTQWSECKSIKLIRDQATCGSCWAFGAA 119

116 EAASDRFCIASNGAVNTLLSAEDVLSCC-SNCGYGCEGGYPINAWKYLVKSGFCTGGSYE 174
    |  ||| || + ||   ++| +|+|||| |+|| |||||||| | ++    |  ||| | 
120 EMISDRTCIETKGAQQPIISPDDLLSCCGSSCGNGCEGGYPIQALRWWDSKGVVTGGDYH 179

175 AQFGCKPYSLAPCGETVGNVTWPSCPDDGYDTPACVNKCTNKNYNVAYTADKHFGSTAYA 234
       ||||| +|||  | ||     ||+    ||+|   |    |+ ||  ||||| +|||
180 GA-GCKPYPIAPC--TSGN-----CPES--KTPSCSMSC-QSGYSTAYAKDKHFGVSAYA 228

235 VGKKVSQIQAEIIAHGPVEAAFTVYEDFYQYKTGVYVHTTGQELGGHAIRILGWGTDNGT 294
    | |  + ||||| |+|||||||+||||||+||+||| || |+ ||||||+|+||||++|+
229 VPKNAASIQAEIYANGPVEAAFSVYEDFYKYKSGVYKHTAGKYLGGHAIKIIGWGTESGS 288

295 PYWLVANSWNVNWGENGYFRIIRGTNECGIEHAVVGGVPKV 335
    ||||||||| |||||+|+|+| || ++|||| ||| |  ||
289 PYWLVANSWGVNWGESGFFKIYRGDDQCGIESAVVAGKAKV 329