Affine Alignment
 
Alignment between srd-16 (top C04E6.9 340aa) and sri-77 (bottom D2062.9 324aa) score 2014

007 LTSYFRILHAIFGGTGCILNAVLILLVIFETPK--HIRLYSILILNFAIFDLAACILDIF 064
    | +|| ++    |    |||++ |  +|| | +  + + | +|      | |+  + || 
012 LLNYFHLI----GLVSFILNSIGIYFLIFNTNRLGNFKYYLLL------FQLSCVLTDID 061

065 IEIRVLPYPNEDSMA-HIMNGVCKHFGL----TACAVGFSLYLHTLTHSIWSLLISFAYR 119
    + | | | |     | |+   +   | +    +|  | |   +      + ||++ |  +
062 LTILVQPIPLFPLFAGHVYGVLFTWFNMQANTSAVTVAFVAVI-----QLESLIVCFVKK 116

120 Y----LILFKTTFKRNNI-LLVILAFYFPSFLQAVTYWTNFVERFEILPILMRVHPDYDF 174
    +    ++| |    +  |  | +|   || |+ |     + + | + |  + +|+|   +
117 HQGVAILLNKHILSKCVINALYVLCLIFPFFVCAGANSIS-LSREDALIYIKKVYPK-GY 174

175 SDSSILITGITNLYTPSVVYGMLHTTLPVTPIYIAIFITRWKIIKVLKKNQSSMSKGTRA 234
       | |   +  + + + +  ++      +  ++ +  | + ||+++   +  +||    
175 LQFSNLPNFVVYMKSQNTIIFLVTLFFAASFGFLCLCFTIYDIIRMMADLKLRISKVAYE 234

235 QHDQLLKILTIQAILPSTSFFTSWLFMG--------LRFGLFQGQVYEHLVFSCAIFMPV 286
    +| + |+ + ||       | |+ | |         | | + |      |+|+       
235 KHSEALRSVIIQ-------FITAVLCMAGPMIQVLILVFEIPQMNFISELIFAWFATHSS 287

287 ISPIIYIVFIKPYREFFVRSFCK 309
    |+ +   +|  |||+   +   |
288 INMVSLFIFFPPYRKIIAKGLKK 310