Human Gene ZFP91 (ENST00000316059.7_4) from GENCODE V47lift37
  Description: ZFP91 zinc finger protein, atypical E3 ubiquitin ligase, transcript variant 1 (from RefSeq NM_053023.5)
Gencode Transcript: ENST00000316059.7_4
Gencode Gene: ENSG00000186660.15_8
Transcript (Including UTRs)
   Position: hg19 chr11:58,346,536-58,389,023 Size: 42,488 Total Exon Count: 11 Strand: +
Coding Region
   Position: hg19 chr11:58,346,755-58,385,179 Size: 38,425 Coding Exon Count: 11 

Page IndexSequence and LinksUniProtKB CommentsPrimersCTDGene Alleles
Microarray ExpressionRNA StructureProtein StructureOther SpeciesGO AnnotationsmRNA Descriptions
Other NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr11:58,346,536-58,389,023)mRNA (may differ from genome)Protein (570 aa)
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-  Comments and Description Text from UniProtKB
  ID: ZFP91_HUMAN
DESCRIPTION: RecName: Full=E3 ubiquitin-protein ligase ZFP91; EC=6.3.2.-; AltName: Full=Zinc finger protein 757; AltName: Full=Zinc finger protein 91 homolog; Short=Zfp-91;
FUNCTION: Atypical E3 ubiquitin-protein ligase that mediates 'Lys- 63'-linked ubiquitination of MAP3K14/NIK, leading to stabilize and activate MAP3K14/NIK. It thereby acts as an activator of the non- canonical NF-kappa-B2/NFKB2 pathway. May also play an important role in cell proliferation and/or anti-apoptosis.
PATHWAY: Protein modification; protein ubiquitination.
SUBUNIT: Interacts with MAP3K14/NIK.
SUBCELLULAR LOCATION: Nucleus.
TISSUE SPECIFICITY: Expressed ubiquitously, particularly at high level in testis. Isoform 2 is testis specific.
MISCELLANEOUS: In contrast to other E3 ubiquitin-protein ligase, does not contain any domain (RING-type zinc finger or HECT domain) known to mediate E3 ligase activity.
SIMILARITY: Belongs to the krueppel C2H2-type zinc-finger protein family.
SIMILARITY: Contains 5 C2H2-type zinc fingers.
SEQUENCE CAUTION: Sequence=AAL09963.1; Type=Frameshift; Positions=72, 80;

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
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+  Microarray Expression Data
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-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -110.00219-0.502 Picture PostScript Text
3' UTR -993.303844-0.258 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR007087 - Znf_C2H2
IPR015880 - Znf_C2H2-like
IPR013087 - Znf_C2H2/integrase_DNA-bd

Pfam Domains:
PF00096 - Zinc finger, C2H2 type
PF13912 - C2H2-type zinc finger

SCOP Domains:
57667 - beta-beta-alpha zinc fingers
57783 - Zinc beta-ribbon

ModBase Predicted Comparative 3D Structure on Q96JP5
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0003676 nucleic acid binding
GO:0004842 ubiquitin-protein transferase activity
GO:0016740 transferase activity
GO:0046872 metal ion binding

Biological Process:
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0007250 activation of NF-kappaB-inducing kinase activity
GO:0016567 protein ubiquitination
GO:0070534 protein K63-linked ubiquitination

Cellular Component:
GO:0005634 nucleus
GO:0005730 nucleolus


-  Descriptions from all associated GenBank mRNAs
  KJ900458 - Synthetic construct Homo sapiens clone ccsbBroadEn_09852 OR9Q1 gene, encodes complete protein.
BC051743 - Homo sapiens zinc finger protein 91 homolog (mouse), mRNA (cDNA clone MGC:51126 IMAGE:4827133), complete cds.
AB056107 - Homo sapiens ZFP91 mRNA for zinc finger protein homologous to mouse Zfp91, complete cds.
AB057443 - Homo sapiens ZFP91-CNTF mRNA for testis specific ZFP91, complete cds.
JD127962 - Sequence 108986 from Patent EP1572962.
JD173513 - Sequence 154537 from Patent EP1572962.
CU690828 - Synthetic construct Homo sapiens gateway clone IMAGE:100020871 5' read ZFP91 mRNA.
KJ905556 - Synthetic construct Homo sapiens clone ccsbBroadEn_15172 ZFP91 gene, encodes complete protein.
AF310246 - Homo sapiens FKSG11 (FKSG11) mRNA, complete cds.
AK295700 - Homo sapiens cDNA FLJ57065 complete cds, highly similar to Zinc finger protein 91.
JD243467 - Sequence 224491 from Patent EP1572962.
JD170564 - Sequence 151588 from Patent EP1572962.
JD274020 - Sequence 255044 from Patent EP1572962.
JD182556 - Sequence 163580 from Patent EP1572962.
JD504682 - Sequence 485706 from Patent EP1572962.
JD116225 - Sequence 97249 from Patent EP1572962.
JD099517 - Sequence 80541 from Patent EP1572962.
JD489466 - Sequence 470490 from Patent EP1572962.
JD175003 - Sequence 156027 from Patent EP1572962.
JD086007 - Sequence 67031 from Patent EP1572962.
JD150451 - Sequence 131475 from Patent EP1572962.
JD327466 - Sequence 308490 from Patent EP1572962.
JD052475 - Sequence 33499 from Patent EP1572962.
JD430008 - Sequence 411032 from Patent EP1572962.
JD376605 - Sequence 357629 from Patent EP1572962.
DQ577361 - Homo sapiens piRNA piR-45473, complete sequence.
JD024101 - Sequence 5125 from Patent EP1572962.
JD034414 - Sequence 15438 from Patent EP1572962.
AF305825 - Homo sapiens PRO2869 mRNA, complete cds.
JD300867 - Sequence 281891 from Patent EP1572962.
JD105208 - Sequence 86232 from Patent EP1572962.
AK025502 - Homo sapiens cDNA: FLJ21849 fis, clone HEP01928.
JD394373 - Sequence 375397 from Patent EP1572962.
JD315577 - Sequence 296601 from Patent EP1572962.
JD093922 - Sequence 74946 from Patent EP1572962.
JD298004 - Sequence 279028 from Patent EP1572962.
JD157886 - Sequence 138910 from Patent EP1572962.
JD038163 - Sequence 19187 from Patent EP1572962.
JD066374 - Sequence 47398 from Patent EP1572962.
JD536560 - Sequence 517584 from Patent EP1572962.
JD248659 - Sequence 229683 from Patent EP1572962.
JD207164 - Sequence 188188 from Patent EP1572962.
JD495738 - Sequence 476762 from Patent EP1572962.
JD056563 - Sequence 37587 from Patent EP1572962.
JD411113 - Sequence 392137 from Patent EP1572962.
JD550189 - Sequence 531213 from Patent EP1572962.
JD484209 - Sequence 465233 from Patent EP1572962.
JD343467 - Sequence 324491 from Patent EP1572962.
JD297338 - Sequence 278362 from Patent EP1572962.
JD079262 - Sequence 60286 from Patent EP1572962.
JD116155 - Sequence 97179 from Patent EP1572962.
JD327083 - Sequence 308107 from Patent EP1572962.
JD252199 - Sequence 233223 from Patent EP1572962.
JD430019 - Sequence 411043 from Patent EP1572962.
JD208126 - Sequence 189150 from Patent EP1572962.
AJ270692 - Homo sapiens partial unknown mRNA from drug-resistant melanoma cells, 3'UTR, clone DMS-8.
JD052077 - Sequence 33101 from Patent EP1572962.
JD089838 - Sequence 70862 from Patent EP1572962.
JD280185 - Sequence 261209 from Patent EP1572962.
JD078408 - Sequence 59432 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: A6NHC4, A8MSG7, ENST00000316059.1, ENST00000316059.2, ENST00000316059.3, ENST00000316059.4, ENST00000316059.5, ENST00000316059.6, FKSG11, NM_053023, Q86V47, Q96JP4, Q96JP5, Q96QA3, uc317pya.1, uc317pya.2, ZFP91_HUMAN, ZNF757
UCSC ID: ENST00000316059.7_4
RefSeq Accession: NM_053023.5
Protein: Q96JP5 (aka ZFP91_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.