Human Gene QRICH2 (ENST00000680821.2_9) from GENCODE V47lift37
  Description: glutamine rich 2, transcript variant 3 (from RefSeq NM_001388453.1)
Gencode Transcript: ENST00000680821.2_9
Gencode Gene: ENSG00000129646.16_21
Transcript (Including UTRs)
   Position: hg19 chr17:74,270,130-74,304,357 Size: 34,228 Total Exon Count: 19 Strand: -
Coding Region
   Position: hg19 chr17:74,270,160-74,304,079 Size: 33,920 Coding Exon Count: 19 

Page IndexSequence and LinksPrimersCTDGene AllelesMicroarray Expression
RNA StructureOther SpeciesmRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr17:74,270,130-74,304,357)mRNA (may differ from genome)Protein (1887 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblExonPrimerGeneCardsHGNC
MGIPubMedUniProtKBWikipedia

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
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+  Microarray Expression Data
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-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -146.40278-0.527 Picture PostScript Text
3' UTR -1.5030-0.050 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
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-  Descriptions from all associated GenBank mRNAs
  AL136774 - Homo sapiens mRNA; cDNA DKFZp434P0316 (from clone DKFZp434P0316).
AK058102 - Homo sapiens cDNA FLJ25373 fis, clone TST01951.
JD460424 - Sequence 441448 from Patent EP1572962.
BC131559 - Homo sapiens glutamine rich 2, mRNA (cDNA clone IMAGE:40108824), complete cds.
JD121765 - Sequence 102789 from Patent EP1572962.
JD128051 - Sequence 109075 from Patent EP1572962.
EU832276 - Synthetic construct Homo sapiens clone HAIB:100067305; DKFZo008A0327 glutamine rich 2 protein (QRICH2) gene, encodes complete protein.
EU832361 - Synthetic construct Homo sapiens clone HAIB:100067390; DKFZo004A0328 glutamine rich 2 protein (QRICH2) gene, encodes complete protein.
JD462236 - Sequence 443260 from Patent EP1572962.
JD233136 - Sequence 214160 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A7P0T7G7, A0A7P0T7G7_HUMAN, ENST00000680821.1, NM_001388453, QRICH2 , uc330hnr.1, uc330hnr.2
UCSC ID: ENST00000680821.2_9
RefSeq Accession: NM_001388453.1

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.