Human Gene MYH7B (ENST00000262873.13_9) from GENCODE V47lift37
  Description: myosin heavy chain 7B (from RefSeq NM_020884.7)
Gencode Transcript: ENST00000262873.13_9
Gencode Gene: ENSG00000078814.19_16
Transcript (Including UTRs)
   Position: hg19 chr20:33,543,671-33,590,240 Size: 46,570 Total Exon Count: 45 Strand: +
Coding Region
   Position: hg19 chr20:33,565,809-33,589,991 Size: 24,183 Coding Exon Count: 41 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr20:33,543,671-33,590,240)mRNA (may differ from genome)Protein (1941 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMalacardsMGIOMIMPubMedUniProtKB
WikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: MYH7B_HUMAN
DESCRIPTION: RecName: Full=Myosin-7B; AltName: Full=Antigen MLAA-21; AltName: Full=Myosin cardiac muscle beta chain; AltName: Full=Myosin heavy chain 7B, cardiac muscle beta isoform; AltName: Full=Slow A MYH14;
FUNCTION: Involved in muscle contraction.
SUBUNIT: Muscle myosin is a hexameric protein that consists of 2 heavy chain subunits (MHC), 2 alkali light chain subunits (MLC) and 2 regulatory light chain subunits (MLC-2) (By similarity).
SUBCELLULAR LOCATION: Membrane; Peripheral membrane protein.
TISSUE SPECIFICITY: Expressed in heart, skeletal muscle, testis, and all specific brain regions examined. Slightly lower expression was detected in ovary and kidney, and intermediate expression was detected in lung, pancreas, spleen and liver.
DEVELOPMENTAL STAGE: Found in fetal liver and brain.
MISCELLANEOUS: Expression does not vary in normal patients compared to patients with acute monocytic leukemia.
MISCELLANEOUS: The cardiac alpha isoform is a 'fast' ATPase myosin, while the beta isoform is a 'slow' ATPase.
SIMILARITY: Contains 1 IQ domain.
SIMILARITY: Contains 1 myosin head-like domain.
CAUTION: This protein sequence has been named 'Slow A' MYH14 (PubMed:11919279), but it also appears also as 'Slow B' MYH15 within the reference.
CAUTION: Represents a conventional myosin. This protein should not be confused with the unconventional myosin-7 (MYO7).
SEQUENCE CAUTION: Sequence=AAI51243.1; Type=Erroneous initiation; Sequence=BAA96036.2; Type=Erroneous initiation; Sequence=CAI19310.2; Type=Erroneous gene model prediction; Sequence=CAI43047.2; Type=Erroneous gene model prediction;

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: MYH7B
Diseases sorted by gene-association score: left ventricular noncompaction* (205), acute monocytic leukemia (10), monocytic leukemia (8)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 47.22 RPKM in Heart - Left Ventricle
Total median expression: 148.60 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -191.70476-0.403 Picture PostScript Text
3' UTR -67.00249-0.269 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR000048 - IQ_motif_EF-hand-BS
IPR015650 - Myosin_1/23/4/7/8/13/15
IPR001609 - Myosin_head_motor_dom
IPR004009 - Myosin_N
IPR002928 - Myosin_tail

Pfam Domains:
PF00063 - Myosin head (motor domain)
PF01576 - Myosin tail
PF02736 - Myosin N-terminal SH3-like domain

SCOP Domains:
50084 - Myosin S1 fragment, N-terminal domain
52540 - P-loop containing nucleoside triphosphate hydrolases
90257 - Myosin rod fragments
57997 - Tropomyosin

ModBase Predicted Comparative 3D Structure on A7E2Y1
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0003774 motor activity
GO:0003777 microtubule motor activity
GO:0003779 actin binding
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008017 microtubule binding
GO:0051015 actin filament binding

Biological Process:
GO:0007018 microtubule-based movement

Cellular Component:
GO:0016020 membrane
GO:0016459 myosin complex
GO:0032982 myosin filament
GO:0097512 cardiac myofibril


-  Descriptions from all associated GenBank mRNAs
  AB040945 - Homo sapiens KIAA1512 mRNA for KIAA1512 protein.
BC151242 - Homo sapiens myosin, heavy chain 7B, cardiac muscle, beta, mRNA (cDNA clone MGC:167836 IMAGE:8860515), complete cds.
AB463134 - Synthetic construct DNA, clone: pF1KA1512, Homo sapiens MYH7B gene for myosin, heavy chain 7B, cardiac muscle, beta, without stop codon, in Flexi system.
LF205975 - JP 2014500723-A/13478: Polycomb-Associated Non-Coding RNAs.
AK000947 - Homo sapiens cDNA FLJ10085 fis, clone HEMBA1002161, moderately similar to MYOSIN HEAVY CHAIN, CARDIAC MUSCLE BETA ISOFORM.
BC069327 - Homo sapiens myosin, heavy chain 7B, cardiac muscle, beta, mRNA (cDNA clone IMAGE:7262137), complete cds.
BC069406 - Homo sapiens myosin, heavy chain 7B, cardiac muscle, beta, mRNA (cDNA clone IMAGE:7262149), complete cds.
CU686753 - Synthetic construct Homo sapiens gateway clone IMAGE:100022597 5' read MYH7B mRNA.
KJ902989 - Synthetic construct Homo sapiens clone ccsbBroadEn_12383 MYH7B gene, encodes complete protein.
JD319078 - Sequence 300102 from Patent EP1572962.
LF350256 - JP 2014500723-A/157759: Polycomb-Associated Non-Coding RNAs.
BC007808 - Homo sapiens myosin, heavy chain 7B, cardiac muscle, beta, mRNA (cDNA clone IMAGE:4298477), partial cds.
LF350259 - JP 2014500723-A/157762: Polycomb-Associated Non-Coding RNAs.
LF350260 - JP 2014500723-A/157763: Polycomb-Associated Non-Coding RNAs.
LF350261 - JP 2014500723-A/157764: Polycomb-Associated Non-Coding RNAs.
LF350262 - JP 2014500723-A/157765: Polycomb-Associated Non-Coding RNAs.
LF350264 - JP 2014500723-A/157767: Polycomb-Associated Non-Coding RNAs.
JD200545 - Sequence 181569 from Patent EP1572962.
JD519773 - Sequence 500797 from Patent EP1572962.
LF350265 - JP 2014500723-A/157768: Polycomb-Associated Non-Coding RNAs.
LF350266 - JP 2014500723-A/157769: Polycomb-Associated Non-Coding RNAs.
JD215226 - Sequence 196250 from Patent EP1572962.
LF350268 - JP 2014500723-A/157771: Polycomb-Associated Non-Coding RNAs.
LF350269 - JP 2014500723-A/157772: Polycomb-Associated Non-Coding RNAs.
LF350270 - JP 2014500723-A/157773: Polycomb-Associated Non-Coding RNAs.
JD186882 - Sequence 167906 from Patent EP1572962.
LF350271 - JP 2014500723-A/157774: Polycomb-Associated Non-Coding RNAs.
JD049701 - Sequence 30725 from Patent EP1572962.
LF350272 - JP 2014500723-A/157775: Polycomb-Associated Non-Coding RNAs.
MA585833 - JP 2018138019-A/157759: Polycomb-Associated Non-Coding RNAs.
MA585836 - JP 2018138019-A/157762: Polycomb-Associated Non-Coding RNAs.
MA585837 - JP 2018138019-A/157763: Polycomb-Associated Non-Coding RNAs.
MA585838 - JP 2018138019-A/157764: Polycomb-Associated Non-Coding RNAs.
MA585839 - JP 2018138019-A/157765: Polycomb-Associated Non-Coding RNAs.
MA585841 - JP 2018138019-A/157767: Polycomb-Associated Non-Coding RNAs.
MA585842 - JP 2018138019-A/157768: Polycomb-Associated Non-Coding RNAs.
MA585843 - JP 2018138019-A/157769: Polycomb-Associated Non-Coding RNAs.
MA585845 - JP 2018138019-A/157771: Polycomb-Associated Non-Coding RNAs.
MA585846 - JP 2018138019-A/157772: Polycomb-Associated Non-Coding RNAs.
MA585847 - JP 2018138019-A/157773: Polycomb-Associated Non-Coding RNAs.
MA585848 - JP 2018138019-A/157774: Polycomb-Associated Non-Coding RNAs.
MA585849 - JP 2018138019-A/157775: Polycomb-Associated Non-Coding RNAs.
MA441552 - JP 2018138019-A/13478: Polycomb-Associated Non-Coding RNAs.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A6E1W127, A7E2Y1, ENST00000262873.1, ENST00000262873.10, ENST00000262873.11, ENST00000262873.12, ENST00000262873.2, ENST00000262873.3, ENST00000262873.4, ENST00000262873.5, ENST00000262873.6, ENST00000262873.7, ENST00000262873.8, ENST00000262873.9, KIAA1512, MYH7B_HUMAN, NM_020884, Q5JVW7, Q6NT44, Q6NT57, Q6WG75, Q96I57, Q9NWE2, Q9P216, uc317hef.1, uc317hef.2
UCSC ID: ENST00000262873.13_9
RefSeq Accession: NM_020884.7
Protein: A7E2Y1 (aka MYH7B_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.