Human Gene MAPK11 (ENST00000330651.11_7) from GENCODE V47lift37
  Description: mitogen-activated protein kinase 11, transcript variant 1 (from RefSeq NM_002751.7)
Gencode Transcript: ENST00000330651.11_7
Gencode Gene: ENSG00000185386.15_9
Transcript (Including UTRs)
   Position: hg19 chr22:50,702,142-50,708,809 Size: 6,668 Total Exon Count: 12 Strand: -
Coding Region
   Position: hg19 chr22:50,703,377-50,708,721 Size: 5,345 Coding Exon Count: 12 

Page IndexSequence and LinksUniProtKB CommentsPrimersCTDGene Alleles
RNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr22:50,702,142-50,708,809)mRNA (may differ from genome)Protein (364 aa)
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-  Comments and Description Text from UniProtKB
  ID: MK11_HUMAN
DESCRIPTION: RecName: Full=Mitogen-activated protein kinase 11; Short=MAP kinase 11; Short=MAPK 11; EC=2.7.11.24; AltName: Full=Mitogen-activated protein kinase p38 beta; Short=MAP kinase p38 beta; Short=p38b; AltName: Full=Stress-activated protein kinase 2b; Short=SAPK2b; AltName: Full=p38-2;
FUNCTION: Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. MAPK11 is one of the four p38 MAPKs which play an important role in the cascades of cellular responses evoked by extracellular stimuli such as proinflammatory cytokines or physical stress leading to direct activation of transcription factors. Accordingly, p38 MAPKs phosphorylate a broad range of proteins and it has been estimated that they may have approximately 200 to 300 substrates each. MAPK11 functions are mostly redundant with those of MAPK14. Some of the targets are downstream kinases which are activated through phosphorylation and further phosphorylate additional targets. RPS6KA5/MSK1 and RPS6KA4/MSK2 can directly phosphorylate and activate transcription factors such as CREB1, ATF1, the NF-kappa-B isoform RELA/NFKB3, STAT1 and STAT3, but can also phosphorylate histone H3 and the nucleosomal protein HMGN1. RPS6KA5/MSK1 and RPS6KA4/MSK2 play important roles in the rapid induction of immediate-early genes in response to stress or mitogenic stimuli, either by inducing chromatin remodeling or by recruiting the transcription machinery. On the other hand, two other kinase targets, MAPKAPK2/MK2 and MAPKAPK3/MK3, participate in the control of gene expression mostly at the post-transcriptional level, by phosphorylating ZFP36 (tristetraprolin) and ELAVL1, and by regulating EEF2K, which is important for the elongation of mRNA during translation. MKNK1/MNK1 and MKNK2/MNK2, two other kinases activated by p38 MAPKs, regulate protein synthesis by phosphorylating the initiation factor EIF4E2. In the cytoplasm, the p38 MAPK pathway is an important regulator of protein turnover. For example, CFLAR is an inhibitor of TNF-induced apoptosis whose proteasome-mediated degradation is regulated by p38 MAPK phosphorylation. Ectodomain shedding of transmembrane proteins is regulated by p38 MAPKs as well. In response to inflammatory stimuli, p38 MAPKs phosphorylate the membrane- associated metalloprotease ADAM17. Such phosphorylation is required for ADAM17-mediated ectodomain shedding of TGF-alpha family ligands, which results in the activation of EGFR signaling and cell proliferation. Additional examples of p38 MAPK substrates are the FGFR1. FGFR1 can be translocated from the extracellular space into the cytosol and nucleus of target cells, and regulates processes such as rRNA synthesis and cell growth. FGFR1 translocation requires p38 MAPK activation. In the nucleus, many transcription factors are phosphorylated and activated by p38 MAPKs in response to different stimuli. Classical examples include ATF1, ATF2, ATF6, ELK1, PTPRH, DDIT3, TP53/p53 and MEF2C and MEF2A. The p38 MAPKs are emerging as important modulators of gene expression by regulating chromatin modifiers and remodelers. The promoters of several genes involved in the inflammatory response, such as IL6, IL8 and IL12B, display a p38 MAPK-dependent enrichment of histone H3 phosphorylation on 'Ser-10' (H3S10ph) in LPS-stimulated myeloid cells. This phosphorylation enhances the accessibility of the cryptic NF-kappa-B-binding sites marking promoters for increased NF-kappa-B recruitment.
CATALYTIC ACTIVITY: ATP + a protein = ADP + a phosphoprotein.
COFACTOR: Magnesium (By similarity).
ENZYME REGULATION: Activated by phosphorylation on threonine and tyrosine by MAP2K3/MKK3, MAP2K4/MKK4 and MAP2K6/MKK6. MAP2K3/MKK3 and MAP2K6/MKK6 are both essential for the activation of MAPK11 induced by environmental stress. HDAC3 interacts directly and selectively with MAPK11 to repress ATF2 transcriptional activity, and regulate TNF gene expression in LPS-stimulated cells. Inhibited by SB203580 and pyridinyl-imidazole related compounds.
SUBUNIT: Interacts with HDAC3 and DUSP16.
INTERACTION: P04637:TP53; NbExp=2; IntAct=EBI-298304, EBI-366083;
SUBCELLULAR LOCATION: Cytoplasm (By similarity). Nucleus (By similarity).
TISSUE SPECIFICITY: Highest levels in the brain and heart. Also expressed in the placenta, lung, liver, skeletal muscle, kidney and pancreas.
DOMAIN: The TXY motif contains the threonine and tyrosine residues whose phosphorylation activates the MAP kinases.
PTM: Dually phosphorylated on Thr-180 and Tyr-182 by MAP2K3/MKK3, MAP2K4/MKK4 and MAP2K6/MKK6, which activates the enzyme.
SIMILARITY: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
SIMILARITY: Contains 1 protein kinase domain.
WEB RESOURCE: Name=NIEHS-SNPs; URL="http://egp.gs.washington.edu/data/mapk11/";

-  Primer design for this transcript
 

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-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 38.21 RPKM in Brain - Cerebellum
Total median expression: 569.93 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -60.2088-0.684 Picture PostScript Text
3' UTR -576.101235-0.466 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR011009 - Kinase-like_dom
IPR003527 - MAP_kinase_CS
IPR008352 - MAPK_p38
IPR000719 - Prot_kinase_cat_dom
IPR017441 - Protein_kinase_ATP_BS
IPR002290 - Ser/Thr_dual-sp_kinase_dom

Pfam Domains:
PF00069 - Protein kinase domain
PF03109 - ABC1 atypical kinase-like domain
PF06293 - Lipopolysaccharide kinase (Kdo/WaaP) family
PF07714 - Protein tyrosine and serine/threonine kinase

SCOP Domains:
56112 - Protein kinase-like (PK-like)

Protein Data Bank (PDB) 3-D Structure
MuPIT help
3GC8 - X-ray MuPIT 3GC9 - X-ray MuPIT 3GP0 - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on Q15759
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0004672 protein kinase activity
GO:0004674 protein serine/threonine kinase activity
GO:0004707 MAP kinase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0016740 transferase activity

Biological Process:
GO:0000187 activation of MAPK activity
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006468 protein phosphorylation
GO:0010628 positive regulation of gene expression
GO:0016310 phosphorylation
GO:0051149 positive regulation of muscle cell differentiation
GO:0051403 stress-activated MAPK cascade
GO:0060043 regulation of cardiac muscle cell proliferation
GO:0060044 negative regulation of cardiac muscle cell proliferation
GO:0071347 cellular response to interleukin-1
GO:0098586 cellular response to virus
GO:1901796 regulation of signal transduction by p53 class mediator
GO:2001184 positive regulation of interleukin-12 secretion
GO:0045648 positive regulation of erythrocyte differentiation

Cellular Component:
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
GO:0005829 cytosol


-  Descriptions from all associated GenBank mRNAs
  U53442 - Human p38Beta MAP kinase mRNA, complete cds.
BC027933 - Homo sapiens mitogen-activated protein kinase 11, mRNA (cDNA clone MGC:34566 IMAGE:5199628), complete cds.
U92268 - Homo sapiens mitogen activated protein kinase p38-2 mRNA, complete cds.
JD445925 - Sequence 426949 from Patent EP1572962.
JD465449 - Sequence 446473 from Patent EP1572962.
JD322115 - Sequence 303139 from Patent EP1572962.
JD163745 - Sequence 144769 from Patent EP1572962.
JD527972 - Sequence 508996 from Patent EP1572962.
JD112793 - Sequence 93817 from Patent EP1572962.
JD229465 - Sequence 210489 from Patent EP1572962.
JD364881 - Sequence 345905 from Patent EP1572962.
JD347541 - Sequence 328565 from Patent EP1572962.
JD334929 - Sequence 315953 from Patent EP1572962.
JD374061 - Sequence 355085 from Patent EP1572962.
JD178149 - Sequence 159173 from Patent EP1572962.
JD548630 - Sequence 529654 from Patent EP1572962.
JD218562 - Sequence 199586 from Patent EP1572962.
JD294485 - Sequence 275509 from Patent EP1572962.
JD265471 - Sequence 246495 from Patent EP1572962.
JD526840 - Sequence 507864 from Patent EP1572962.
JD165005 - Sequence 146029 from Patent EP1572962.
AF001174 - Homo sapiens p38beta2 MAP kinase mRNA, complete cds.
AK291845 - Homo sapiens cDNA FLJ75738 complete cds, highly similar to Homo sapiens mitogen-activated protein kinase 11 (MAPK11), transcript variant 1, mRNA.
JD112641 - Sequence 93665 from Patent EP1572962.
JD051313 - Sequence 32337 from Patent EP1572962.
JD243907 - Sequence 224931 from Patent EP1572962.
AK308969 - Homo sapiens cDNA, FLJ99010.
JD452032 - Sequence 433056 from Patent EP1572962.
AF031135 - Homo sapiens p38beta2 MAP kinase mRNA, complete cds.
JD155700 - Sequence 136724 from Patent EP1572962.
Y14440 - Homo sapiens mRNA for stress activated protein kinase-2b.
JD222368 - Sequence 203392 from Patent EP1572962.
CR456514 - Homo sapiens MAPK11 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.MAPK11).
AF001008 - Human p38Beta2 MAP Kinase mRNA, complete cds.
CU013114 - Homo sapiens MAPK11, mRNA (cDNA clone IMAGE:100000371), complete cds, with stop codon, in Gateway system.
DQ891728 - Synthetic construct clone IMAGE:100004358; FLH179464.01X; RZPDo839G10130D mitogen-activated protein kinase 11 (MAPK11) gene, encodes complete protein.
DQ894905 - Synthetic construct Homo sapiens clone IMAGE:100009365; FLH179460.01L; RZPDo839G10129D mitogen-activated protein kinase 11 (MAPK11) gene, encodes complete protein.
CU013402 - Homo sapiens MAPK11, mRNA (cDNA clone IMAGE:100000275), complete cds, without stop codon, in Gateway system.
AB463125 - Synthetic construct DNA, clone: pF1KB8451, Homo sapiens MAPK11 gene for mitogen-activated protein kinase 11, without stop codon, in Flexi system.
AK299745 - Homo sapiens cDNA FLJ51765 complete cds, moderately similar to Mitogen-activated protein kinase 11 (EC 2.7.11.24).
AK309046 - Homo sapiens cDNA, FLJ99087.
LF212625 - JP 2014500723-A/20128: Polycomb-Associated Non-Coding RNAs.
MA448202 - JP 2018138019-A/20128: Polycomb-Associated Non-Coding RNAs.

-  Biochemical and Signaling Pathways
  BioCarta from NCI Cancer Genome Anatomy Project
h_mapkPathway - MAPKinase Signaling Pathway
h_nthiPathway - NFkB activation by Nontypeable Hemophilus influenzae

Reactome (by CSHL, EBI, and GO)

Protein Q15759 (Reactome details) participates in the following event(s):

R-HSA-448957 Interaction of p38 MAPK with JLP
R-HSA-1247960 Activation of p38 MAPK
R-HSA-448955 Phosphorylation of MEF2 proteins by p38
R-HSA-450257 Nuclear export of human p38 MAPK mediated by its substrate MAPKAPK2 or 3
R-HSA-450222 Active p38 MAPK phosphorylates MAPKAPK2 or 3
R-HSA-450333 Activated human MKK3/MKK6 phosphorylates p38 MAPK complexed with MAPKAPK2 or MAPKAPK3
R-HSA-3239019 Active p38 MAPK phosphorylates MAPKAPK5
R-HSA-3238999 Activated human MKK3/MKK6 phosphorylates p38 MAPK complexed with MAPKAPK5
R-HSA-198669 p38MAPK phosphorylates MSK1
R-HSA-448948 Phosphorylation of E proteins by p38 MAPK
R-HSA-1592233 p38 MAPK phosphorylates PPARGC1A
R-HSA-187688 p38 MAPK phosphorylates MAPKAPK2, MAPKAPK3
R-HSA-451152 MAP kinase p38 phosphorylates KSRP
R-HSA-3239014 MAPKAPK5 phosphorylates TP53
R-HSA-3229102 p-MAPKAPK3 phosphorylates BMI1
R-HSA-168053 Phosphorylated MAPKs phosphorylate ATF-2
R-HSA-375170 CDO in myogenesis
R-HSA-168638 NOD1/2 Signaling Pathway
R-HSA-171007 p38MAPK events
R-HSA-376172 DSCAM interactions
R-HSA-4420097 VEGFA-VEGFR2 Pathway
R-HSA-525793 Myogenesis
R-HSA-168643 Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways
R-HSA-450302 activated TAK1 mediates p38 MAPK activation
R-HSA-2559580 Oxidative Stress Induced Senescence
R-HSA-198753 ERK/MAPK targets
R-HSA-2151209 Activation of PPARGC1A (PGC-1alpha) by phosphorylation
R-HSA-167044 Signalling to RAS
R-HSA-373752 Netrin-1 signaling
R-HSA-194138 Signaling by VEGF
R-HSA-1266738 Developmental Biology
R-HSA-168249 Innate Immune System
R-HSA-450604 KSRP (KHSRP) binds and destabilizes mRNA
R-HSA-450294 MAP kinase activation
R-HSA-2559583 Cellular Senescence
R-HSA-6804756 Regulation of TP53 Activity through Phosphorylation
R-HSA-450341 Activation of the AP-1 family of transcription factors
R-HSA-198725 Nuclear Events (kinase and transcription factor activation)
R-HSA-450282 MAPK targets/ Nuclear events mediated by MAP kinases
R-HSA-1592230 Mitochondrial biogenesis
R-HSA-187687 Signalling to ERKs
R-HSA-422475 Axon guidance
R-HSA-9006934 Signaling by Receptor Tyrosine Kinases
R-HSA-168256 Immune System
R-HSA-450531 Regulation of mRNA stability by proteins that bind AU-rich elements
R-HSA-166058 MyD88:Mal cascade initiated on plasma membrane
R-HSA-168164 Toll Like Receptor 3 (TLR3) Cascade
R-HSA-448424 Interleukin-17 signaling
R-HSA-937061 TRIF(TICAM1)-mediated TLR4 signaling
R-HSA-975138 TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation
R-HSA-975871 MyD88 cascade initiated on plasma membrane
R-HSA-2262752 Cellular responses to stress
R-HSA-5633007 Regulation of TP53 Activity
R-HSA-187037 Signaling by NTRK1 (TRKA)
R-HSA-1852241 Organelle biogenesis and maintenance
R-HSA-162582 Signal Transduction
R-HSA-8953854 Metabolism of RNA
R-HSA-166016 Toll Like Receptor 4 (TLR4) Cascade
R-HSA-168179 Toll Like Receptor TLR1:TLR2 Cascade
R-HSA-168188 Toll Like Receptor TLR6:TLR2 Cascade
R-HSA-168898 Toll-Like Receptors Cascades
R-HSA-449147 Signaling by Interleukins
R-HSA-166166 MyD88-independent TLR4 cascade
R-HSA-975155 MyD88 dependent cascade initiated on endosome
R-HSA-168142 Toll Like Receptor 10 (TLR10) Cascade
R-HSA-168176 Toll Like Receptor 5 (TLR5) Cascade
R-HSA-8953897 Cellular responses to external stimuli
R-HSA-3700989 Transcriptional Regulation by TP53
R-HSA-166520 Signaling by NTRKs
R-HSA-181438 Toll Like Receptor 2 (TLR2) Cascade
R-HSA-1280215 Cytokine Signaling in Immune system
R-HSA-168138 Toll Like Receptor 9 (TLR9) Cascade
R-HSA-168181 Toll Like Receptor 7/8 (TLR7/8) Cascade
R-HSA-212436 Generic Transcription Pathway
R-HSA-73857 RNA Polymerase II Transcription
R-HSA-74160 Gene expression (Transcription)

-  Other Names for This Gene
  Alternate Gene Symbols: A8K730, B0LPG1, B7Z630, E7ETQ1, ENST00000330651.1, ENST00000330651.10, ENST00000330651.2, ENST00000330651.3, ENST00000330651.4, ENST00000330651.5, ENST00000330651.6, ENST00000330651.7, ENST00000330651.8, ENST00000330651.9, L7RT27, MK11_HUMAN, NM_002751, O00284, O15472, PRKM11, Q15759, Q2XNF2, SAPK2, SAPK2B, uc317tae.1, uc317tae.2
UCSC ID: ENST00000330651.11_7
RefSeq Accession: NM_002751.7
Protein: Q15759 (aka MK11_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.