Human Gene KIF15 (ENST00000326047.9_4) from GENCODE V47lift37
  Description: kinesin family member 15 (from RefSeq NM_020242.3)
Gencode Transcript: ENST00000326047.9_4
Gencode Gene: ENSG00000163808.17_13
Transcript (Including UTRs)
   Position: hg19 chr3:44,803,286-44,894,748 Size: 91,463 Total Exon Count: 35 Strand: +
Coding Region
   Position: hg19 chr3:44,803,358-44,894,227 Size: 90,870 Coding Exon Count: 35 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr3:44,803,286-44,894,748)mRNA (may differ from genome)Protein (1388 aa)
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaAlphaFold
BioGPSEnsemblEntrez GeneExonPrimerGeneCardsHGNC
MalacardsMGIOMIMPubMedReactomeUniProtKB
WikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: KIF15_HUMAN
DESCRIPTION: RecName: Full=Kinesin-like protein KIF15; AltName: Full=Kinesin-like protein 2; Short=hKLP2; AltName: Full=Kinesin-like protein 7; AltName: Full=Serologically defined breast cancer antigen NY-BR-62;
FUNCTION: Plus-end directed kinesin-like motor enzyme involved in mitotic spindle assembly (By similarity).
SUBUNIT: Interacts with MKI67 and TPX2.
SUBCELLULAR LOCATION: Cytoplasm. Cytoplasm, cytoskeleton, spindle. Note=Detected during the interphase in the cytoplasm as finely punctuate pattern and irregularly shaped dots. Detected during mitosis on the mitotic spindle. Colocalizes with TPX2 in mitosis. Localizes at the central spindle at anaphase (By similarity). Localizes at the sites of invaginating cell membranes, a position that corresponds to the location of the contractile actomyosin ring of dividing cells (By similarity). Colocalizes with actin in interphase (By similarity). Colocalizes in dendrites and in growth cone of axons with microtubules (By similarity).
TISSUE SPECIFICITY: Expressed in testis, colon, thymus and in breast cancer.
SIMILARITY: Belongs to the kinesin-like protein family. KLP2 subfamily.
SIMILARITY: Contains 1 kinesin-motor domain.
SEQUENCE CAUTION: Sequence=AAG48261.1; Type=Frameshift; Positions=Several;

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: KIF15
Diseases sorted by gene-association score: thrombocytopenia robin sequence* (350), breast cancer (2)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 9.78 RPKM in Testis
Total median expression: 33.90 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -29.0072-0.403 Picture PostScript Text
3' UTR -122.30521-0.235 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR024658 - Kinesin-like_KLP2
IPR001752 - Kinesin_motor_dom

Pfam Domains:
PF00225 - Kinesin motor domain
PF15908 - Hyaluronan mediated motility receptor C-terminal
PF16796 - Microtubule binding

SCOP Domains:
52540 - P-loop containing nucleoside triphosphate hydrolases

ModBase Predicted Comparative 3D Structure on Q9NS87
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003774 motor activity
GO:0003777 microtubule motor activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008017 microtubule binding
GO:0016887 ATPase activity

Biological Process:
GO:0000278 mitotic cell cycle
GO:0006890 retrograde vesicle-mediated transport, Golgi to ER
GO:0007018 microtubule-based movement
GO:0008283 cell proliferation
GO:0019886 antigen processing and presentation of exogenous peptide antigen via MHC class II

Cellular Component:
GO:0005737 cytoplasm
GO:0005813 centrosome
GO:0005819 spindle
GO:0005829 cytosol
GO:0005856 cytoskeleton
GO:0005873 plus-end kinesin complex
GO:0005874 microtubule
GO:0016020 membrane


-  Descriptions from all associated GenBank mRNAs
  LF384607 - JP 2014500723-A/192110: Polycomb-Associated Non-Coding RNAs.
AB035898 - Homo sapiens hklp2 mRNA for kinesin-like protein 2, complete cds.
AK307674 - Homo sapiens cDNA, FLJ97622.
BC143752 - Homo sapiens cDNA clone IMAGE:9052266.
BC117174 - Homo sapiens kinesin family member 15, mRNA (cDNA clone MGC:150783 IMAGE:40125725), complete cds.
MA620184 - JP 2018138019-A/192110: Polycomb-Associated Non-Coding RNAs.
JD536052 - Sequence 517076 from Patent EP1572962.
JD453899 - Sequence 434923 from Patent EP1572962.
LF378949 - JP 2014500723-A/186452: Polycomb-Associated Non-Coding RNAs.
MA614526 - JP 2018138019-A/186452: Polycomb-Associated Non-Coding RNAs.
AL832908 - Homo sapiens mRNA; cDNA DKFZp762D1914 (from clone DKFZp762D1914).
AK098533 - Homo sapiens cDNA FLJ25667 fis, clone TST03527, highly similar to Homo sapiens hklp2 mRNA for kinesin-like protein 2.
LF378954 - JP 2014500723-A/186457: Polycomb-Associated Non-Coding RNAs.
AF308294 - Homo sapiens serologically defined breast cancer antigen NY-BR-62 mRNA, partial cds.
AK027816 - Homo sapiens cDNA FLJ14910 fis, clone PLACE1006368, weakly similar to HYALURONAN-MEDIATED MOTILITY RECEPTOR.
LF378959 - JP 2014500723-A/186462: Polycomb-Associated Non-Coding RNAs.
LF378962 - JP 2014500723-A/186465: Polycomb-Associated Non-Coding RNAs.
JD183246 - Sequence 164270 from Patent EP1572962.
JD401004 - Sequence 382028 from Patent EP1572962.
JD438386 - Sequence 419410 from Patent EP1572962.
MA614531 - JP 2018138019-A/186457: Polycomb-Associated Non-Coding RNAs.
MA614536 - JP 2018138019-A/186462: Polycomb-Associated Non-Coding RNAs.
MA614539 - JP 2018138019-A/186465: Polycomb-Associated Non-Coding RNAs.

-  Biochemical and Signaling Pathways
  BioCarta from NCI Cancer Genome Anatomy Project
h_ranMSpathway - Role of Ran in mitotic spindle regulation

Reactome (by CSHL, EBI, and GO)

Protein Q9NS87 (Reactome details) participates in the following event(s):

R-HSA-984821 Kinesin-12 is a dimer
R-HSA-983266 Kinesins bind microtubules
R-HSA-6811426 Retrograde COPI vesicles bind kinesin and microtubules
R-HSA-6811423 Retrograde vesicle is tethered at the ER by the NRZ complex and t-SNAREs
R-HSA-983189 Kinesins
R-HSA-983231 Factors involved in megakaryocyte development and platelet production
R-HSA-109582 Hemostasis
R-HSA-2132295 MHC class II antigen presentation
R-HSA-6811434 COPI-dependent Golgi-to-ER retrograde traffic
R-HSA-1280218 Adaptive Immune System
R-HSA-8856688 Golgi-to-ER retrograde transport
R-HSA-168256 Immune System
R-HSA-6811442 Intra-Golgi and retrograde Golgi-to-ER traffic
R-HSA-199991 Membrane Trafficking
R-HSA-5653656 Vesicle-mediated transport

-  Other Names for This Gene
  Alternate Gene Symbols: ENST00000326047.1, ENST00000326047.2, ENST00000326047.3, ENST00000326047.4, ENST00000326047.5, ENST00000326047.6, ENST00000326047.7, ENST00000326047.8, KIF15_HUMAN, KLP2, KNSL7, NM_020242, Q17RV9, Q69YL6, Q96JX7, Q9H280, Q9NS87, uc317rzf.1, uc317rzf.2
UCSC ID: ENST00000326047.9_4
RefSeq Accession: NM_020242.3
Protein: Q9NS87 (aka KIF15_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.