Human Gene HELZ2 (ENST00000370082.1_4) from GENCODE V47lift37
  Description: helicase with zinc finger 2 (from HGNC HELZ2)
Gencode Transcript: ENST00000370082.1_4
Gencode Gene: ENSG00000130589.16_10
Transcript (Including UTRs)
   Position: hg19 chr20:62,201,492-62,205,592 Size: 4,101 Total Exon Count: 4 Strand: -


Page IndexSequence and LinksPrimersCTDRNA-Seq ExpressionOther Species
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr20:62,201,492-62,205,592)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
BioGPSEnsemblExonPrimerHGNCPubMedWikipedia

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 10.36 RPKM in Cells - EBV-transformed lymphocytes
Total median expression: 123.67 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  LF206068 - JP 2014500723-A/13571: Polycomb-Associated Non-Coding RNAs.
AB201715 - Homo sapiens PDIP-1beta mRNA for PPAR gamma DBD-interacting protein1 beta, complete cds.
JD208991 - Sequence 190015 from Patent EP1572962.
JD159083 - Sequence 140107 from Patent EP1572962.
AK023724 - Homo sapiens cDNA FLJ13662 fis, clone PLACE1011643.
BC035130 - Homo sapiens peroxisomal proliferator-activated receptor A interacting complex 285, mRNA (cDNA clone IMAGE:5263749), with apparent retained intron.
JD522514 - Sequence 503538 from Patent EP1572962.
JD289039 - Sequence 270063 from Patent EP1572962.
BC104974 - Homo sapiens peroxisomal proliferator-activated receptor A interacting complex 285, mRNA (cDNA clone IMAGE:8143977), complete cds.
BC112023 - Homo sapiens peroxisomal proliferator-activated receptor A interacting complex 285, mRNA (cDNA clone IMAGE:8327491), complete cds.
AB232667 - Homo sapiens PDIP1beta mRNA for PPARgamma-DNA-binding domain-interacting protein1 beta, partial cds.
JD390110 - Sequence 371134 from Patent EP1572962.
JD231807 - Sequence 212831 from Patent EP1572962.
JD458189 - Sequence 439213 from Patent EP1572962.
JD458411 - Sequence 439435 from Patent EP1572962.
JD057590 - Sequence 38614 from Patent EP1572962.
JD389063 - Sequence 370087 from Patent EP1572962.
JD484663 - Sequence 465687 from Patent EP1572962.
JD446650 - Sequence 427674 from Patent EP1572962.
JD355716 - Sequence 336740 from Patent EP1572962.
JD459702 - Sequence 440726 from Patent EP1572962.
JD548397 - Sequence 529421 from Patent EP1572962.
JD467460 - Sequence 448484 from Patent EP1572962.
JD539832 - Sequence 520856 from Patent EP1572962.
JD538461 - Sequence 519485 from Patent EP1572962.
JD540017 - Sequence 521041 from Patent EP1572962.
JD464820 - Sequence 445844 from Patent EP1572962.
JD351427 - Sequence 332451 from Patent EP1572962.
MA441645 - JP 2018138019-A/13571: Polycomb-Associated Non-Coding RNAs.

-  Other Names for This Gene
  Alternate Gene Symbols: AK023724, uc318ibx.1
UCSC ID: ENST00000370082.1_4
RefSeq Accession: NM_001037335.2

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.