Human Gene HCG22 (ENST00000805383.1_1) from GENCODE V47lift37

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Description: HLA complex group 22 (gene/pseudogene) (from HGNC HCG22)
Gencode Transcript: ENST00000805383.1_1
Gencode Gene: ENSG00000228789.11_12
Transcript (Including UTRs)
Position: hg19 chr6:31,021,953-31,033,006 Size: 11,054 Total Exon Count: 3 Strand: +

Page Index	Sequence and Links	Primers	CTD	Other Species	mRNA Descriptions
Other Names	Model Information	Methods

Data last updated at UCSC: 2024-08-22 23:36:26

Sequence and Links to Tools and Databases

Genomic Sequence (chr6:31,021,953-31,033,006)			mRNA (may differ from genome)		No protein
Gene Sorter	Genome Browser	Other Species FASTA	Gene interactions	Table Schema	BioGPS
Ensembl	ExonPrimer	HGNC	PubMed	Wikipedia

Primer design for this transcript

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3

Comparative Toxicogenomics Database (CTD)


	The following chemicals interact with this gene D006830 Hydralazine D014635 Valproic Acid

Orthologous Genes in Other Species

Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.

Mouse	Rat	Zebrafish	D. melanogaster	C. elegans	S. cerevisiae
No ortholog	No ortholog	No ortholog	No ortholog	No ortholog	No ortholog

Descriptions from all associated GenBank mRNAs


	AB560771 - Homo sapiens PBMUCL2 mRNA for panbronchiolitis related mucin-like 2, complete cds. AB600644 - Homo sapiens mRNA for hypothetical protein, transcript variant of PBMUCL2, complete cds. AK094433 - Homo sapiens cDNA FLJ37114 fis, clone BRACE2022030. LP896439 - Sequence 1303 from Patent EP3253886. JD222482 - Sequence 203506 from Patent EP1572962. JD564557 - Sequence 545581 from Patent EP1572962. JD402780 - Sequence 383804 from Patent EP1572962. JD360170 - Sequence 341194 from Patent EP1572962. JD442219 - Sequence 423243 from Patent EP1572962. JD197750 - Sequence 178774 from Patent EP1572962. JD337431 - Sequence 318455 from Patent EP1572962. JD412697 - Sequence 393721 from Patent EP1572962. JD412698 - Sequence 393722 from Patent EP1572962. JD246808 - Sequence 227832 from Patent EP1572962. JD512644 - Sequence 493668 from Patent EP1572962. JD097657 - Sequence 78681 from Patent EP1572962. JD378204 - Sequence 359228 from Patent EP1572962.

Other Names for This Gene


	Alternate Gene Symbols: AB560771, uc351nra.1 UCSC ID: ENST00000805383.1_1 RefSeq Accession: NR_145427.2

Gene Model Information


	Click here for a detailed description of the fields of the table above.

Methods, Credits, and Use Restrictions


	Click here for details on how this gene model was made and data restrictions if any.