Human Gene ERO1A (ENST00000395686.8_7) from GENCODE V47lift37
  Description: endoplasmic reticulum oxidoreductase 1 alpha, transcript variant 2 (from RefSeq NM_014584.3)
Gencode Transcript: ENST00000395686.8_7
Gencode Gene: ENSG00000197930.13_10
Transcript (Including UTRs)
   Position: hg19 chr14:53,106,633-53,162,276 Size: 55,644 Total Exon Count: 16 Strand: -
Coding Region
   Position: hg19 chr14:53,110,288-53,162,199 Size: 51,912 Coding Exon Count: 16 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsGene Alleles
RNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr14:53,106,633-53,162,276)mRNA (may differ from genome)Protein (468 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaAlphaFold
BioGPSEnsemblEntrez GeneExonPrimerGeneCardsMalacards
MGIOMIMPubMedReactomeUniProtKBWikipedia
BioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: ERO1A_HUMAN
DESCRIPTION: RecName: Full=ERO1-like protein alpha; Short=ERO1-L; Short=ERO1-L-alpha; EC=1.8.4.-; AltName: Full=Endoplasmic oxidoreductin-1-like protein; AltName: Full=Oxidoreductin-1-L-alpha; Flags: Precursor;
FUNCTION: Essential oxidoreductase that oxidizes proteins in the endoplasmic reticulum to produce disulfide bonds. Acts by oxidizing directly P4HB/PDI isomerase through a direct disulfide exchange. Does not act as a direct oxidant of folding substrate, but relies on P4HB/PDI to transfer oxidizing equivalent. Associates with ERP44 but not with GRP54, demonstrating that it does not oxidize all PDI related proteins and can discriminate between PDI and related proteins. Its reoxidation probably involves electron transfer to molecular oxygen via FAD. Acts independently of glutathione. May be responsible for a significant proportion of reactive oxygen species (ROS) in the cell, thereby being a source of oxidative stress. Required for the folding of immunoglobulin proteins. Responsible for the release of the unfolded cholera toxin from reduced P4HB/PDI in case of infection by V.cholerae, thereby playing a role in retrotranslocation of the toxin. Plays an important role in ER stress-induced, CHOP- dependent apoptosis by activating the inositol 1,4,5-trisphosphate receptor IP3R1.
COFACTOR: FAD.
ENZYME REGULATION: Enzyme activity is tightly regulated to prevent the accumulation of reactive oxygen species in the endoplasmic reticulum. Reversibly down-regulated by the formation of disulfide bonds between the active site Cys-94 and Cys-131, and between Cys- 99 and Cys-104. Glutathione may be required to regulate its activity in the endoplasmic reticulum.
SUBUNIT: Predominantly monomer. May function both as a monomer and a homodimer. Interacts with PDILT.
SUBCELLULAR LOCATION: Endoplasmic reticulum membrane; Peripheral membrane protein; Lumenal side. Note=The association with ERP44 is essential for its retention in the endoplasmic reticulum.
TISSUE SPECIFICITY: Widely expressed at low level. Expressed at high level in upper digestive tract. Highly expressed in esophagus. Weakly expressed in stomach and duodenum.
INDUCTION: Stimulated by hypoxia; suggesting that it is regulated via the HIF-pathway.
PTM: N-glycosylated.
PTM: The Cys-94/Cys-99 and Cys-394/Cys-397 disulfide bonds constitute the redox-active center. The Cys-94/Cys-99 disulfide bond may accept electron from P4HB and funnel them to the active site disulfide Cys-394/Cys-397 (By similarity).
SIMILARITY: Belongs to the EROs family.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: ERO1A
Diseases sorted by gene-association score: cholera (6)

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 78.14 RPKM in Esophagus - Mucosa
Total median expression: 527.91 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -28.0077-0.364 Picture PostScript Text
3' UTR -827.603655-0.226 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR007266 - ER_oxidoreductin-1

Pfam Domains:
PF04137 - Endoplasmic Reticulum Oxidoreductin 1 (ERO1)

SCOP Domains:
110019 - ERO1-like

Protein Data Bank (PDB) 3-D Structure
MuPIT help
3AHQ - X-ray MuPIT 3AHR - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on Q96HE7
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details Gene Details  
Gene SorterGene Sorter Gene Sorter  
 RGDEnsembl   
      
      

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0003756 protein disulfide isomerase activity
GO:0005515 protein binding
GO:0015035 protein disulfide oxidoreductase activity
GO:0015036 disulfide oxidoreductase activity
GO:0016491 oxidoreductase activity
GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor

Biological Process:
GO:0006457 protein folding
GO:0006464 cellular protein modification process
GO:0006915 apoptotic process
GO:0009266 response to temperature stimulus
GO:0010260 animal organ senescence
GO:0019471 4-hydroxyproline metabolic process
GO:0022417 protein maturation by protein folding
GO:0030198 extracellular matrix organization
GO:0030968 endoplasmic reticulum unfolded protein response
GO:0034599 cellular response to oxidative stress
GO:0034975 protein folding in endoplasmic reticulum
GO:0034976 response to endoplasmic reticulum stress
GO:0045454 cell redox homeostasis
GO:0050873 brown fat cell differentiation
GO:0051085 chaperone mediated protein folding requiring cofactor
GO:0051209 release of sequestered calcium ion into cytosol
GO:0055114 oxidation-reduction process
GO:0070059 intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:0071456 cellular response to hypoxia

Cellular Component:
GO:0005783 endoplasmic reticulum
GO:0005788 endoplasmic reticulum lumen
GO:0005789 endoplasmic reticulum membrane
GO:0016020 membrane
GO:0030425 dendrite
GO:0043231 intracellular membrane-bounded organelle


-  Descriptions from all associated GenBank mRNAs
  LF210023 - JP 2014500723-A/17526: Polycomb-Associated Non-Coding RNAs.
JD563583 - Sequence 544607 from Patent EP1572962.
AK024224 - Homo sapiens cDNA FLJ14162 fis, clone NT2RM4002504.
JD304518 - Sequence 285542 from Patent EP1572962.
JD350384 - Sequence 331408 from Patent EP1572962.
JD094277 - Sequence 75301 from Patent EP1572962.
JD058996 - Sequence 40020 from Patent EP1572962.
JD410594 - Sequence 391618 from Patent EP1572962.
JD248000 - Sequence 229024 from Patent EP1572962.
JD500904 - Sequence 481928 from Patent EP1572962.
JD339448 - Sequence 320472 from Patent EP1572962.
JD327508 - Sequence 308532 from Patent EP1572962.
LF334099 - JP 2014500723-A/141602: Polycomb-Associated Non-Coding RNAs.
JD428459 - Sequence 409483 from Patent EP1572962.
JD072540 - Sequence 53564 from Patent EP1572962.
JD082022 - Sequence 63046 from Patent EP1572962.
JD254286 - Sequence 235310 from Patent EP1572962.
JD146224 - Sequence 127248 from Patent EP1572962.
JD320465 - Sequence 301489 from Patent EP1572962.
JD417447 - Sequence 398471 from Patent EP1572962.
JD358401 - Sequence 339425 from Patent EP1572962.
JD303685 - Sequence 284709 from Patent EP1572962.
JD262311 - Sequence 243335 from Patent EP1572962.
JD137092 - Sequence 118116 from Patent EP1572962.
JD512367 - Sequence 493391 from Patent EP1572962.
JD124463 - Sequence 105487 from Patent EP1572962.
LF334100 - JP 2014500723-A/141603: Polycomb-Associated Non-Coding RNAs.
JD520081 - Sequence 501105 from Patent EP1572962.
JD503058 - Sequence 484082 from Patent EP1572962.
LF334101 - JP 2014500723-A/141604: Polycomb-Associated Non-Coding RNAs.
JD058541 - Sequence 39565 from Patent EP1572962.
JC506682 - Sequence 50 from Patent EP2733220.
JC737794 - Sequence 50 from Patent WO2014075939.
JD560116 - Sequence 541140 from Patent EP1572962.
JD433552 - Sequence 414576 from Patent EP1572962.
JD237285 - Sequence 218309 from Patent EP1572962.
JD153136 - Sequence 134160 from Patent EP1572962.
JD313295 - Sequence 294319 from Patent EP1572962.
LF334102 - JP 2014500723-A/141605: Polycomb-Associated Non-Coding RNAs.
JD359171 - Sequence 340195 from Patent EP1572962.
JD294889 - Sequence 275913 from Patent EP1572962.
JD294888 - Sequence 275912 from Patent EP1572962.
JD327309 - Sequence 308333 from Patent EP1572962.
AF081886 - Homo sapiens ERO1-like protein (ERO1-L) mRNA, complete cds.
JD052064 - Sequence 33088 from Patent EP1572962.
JD232503 - Sequence 213527 from Patent EP1572962.
JD338400 - Sequence 319424 from Patent EP1572962.
JD468862 - Sequence 449886 from Patent EP1572962.
JD539359 - Sequence 520383 from Patent EP1572962.
LF334103 - JP 2014500723-A/141606: Polycomb-Associated Non-Coding RNAs.
JD506247 - Sequence 487271 from Patent EP1572962.
JD071863 - Sequence 52887 from Patent EP1572962.
JD069896 - Sequence 50920 from Patent EP1572962.
JD174681 - Sequence 155705 from Patent EP1572962.
JD501566 - Sequence 482590 from Patent EP1572962.
JD330724 - Sequence 311748 from Patent EP1572962.
JD441028 - Sequence 422052 from Patent EP1572962.
LF334104 - JP 2014500723-A/141607: Polycomb-Associated Non-Coding RNAs.
AK292839 - Homo sapiens cDNA FLJ77259 complete cds, highly similar to Homo sapiens ERO1-like (S. cerevisiae) (ERO1L), mRNA.
AF123887 - Homo sapiens ERO1L (ERO1L) mRNA, partial cds.
BC012941 - Homo sapiens ERO1-like (S. cerevisiae), mRNA (cDNA clone MGC:17305 IMAGE:3868538), complete cds.
AY358463 - Homo sapiens clone DNA53974 ERO1L (UNQ434) mRNA, complete cds.
LF334105 - JP 2014500723-A/141608: Polycomb-Associated Non-Coding RNAs.
BC008674 - Homo sapiens ERO1-like (S. cerevisiae), mRNA (cDNA clone MGC:8839 IMAGE:3866930), complete cds.
LF334106 - JP 2014500723-A/141609: Polycomb-Associated Non-Coding RNAs.
JD350271 - Sequence 331295 from Patent EP1572962.
LF334107 - JP 2014500723-A/141610: Polycomb-Associated Non-Coding RNAs.
HQ448296 - Synthetic construct Homo sapiens clone IMAGE:100071709; CCSB002996_01 ERO1-like (S. cerevisiae) (ERO1L) gene, encodes complete protein.
JF432168 - Synthetic construct Homo sapiens clone IMAGE:100073319 ERO1-like (S. cerevisiae) (ERO1L) gene, encodes complete protein.
KJ893735 - Synthetic construct Homo sapiens clone ccsbBroadEn_03129 ERO1L gene, encodes complete protein.
KJ898765 - Synthetic construct Homo sapiens clone ccsbBroadEn_08159 ERO1L gene, encodes complete protein.
GQ129372 - Synthetic construct Homo sapiens clone HAIB:100068696; DKFZo004E1036 ERO1-like (S. cerevisiae) protein (ERO1L) gene, partial cds.
GQ129373 - Synthetic construct Homo sapiens clone HAIB:100068599; DKFZo008E1035 ERO1-like (S. cerevisiae) protein (ERO1L) gene, complete cds.
LF334109 - JP 2014500723-A/141612: Polycomb-Associated Non-Coding RNAs.
LF334110 - JP 2014500723-A/141613: Polycomb-Associated Non-Coding RNAs.
LF334113 - JP 2014500723-A/141616: Polycomb-Associated Non-Coding RNAs.
LF334116 - JP 2014500723-A/141619: Polycomb-Associated Non-Coding RNAs.
CU680454 - Synthetic construct Homo sapiens gateway clone IMAGE:100017332 5' read ERO1L mRNA.
LF334117 - JP 2014500723-A/141620: Polycomb-Associated Non-Coding RNAs.
LF334119 - JP 2014500723-A/141622: Polycomb-Associated Non-Coding RNAs.
CU679029 - Synthetic construct Homo sapiens gateway clone IMAGE:100019539 5' read ERO1L mRNA.
JD444048 - Sequence 425072 from Patent EP1572962.
MA445600 - JP 2018138019-A/17526: Polycomb-Associated Non-Coding RNAs.
MA569676 - JP 2018138019-A/141602: Polycomb-Associated Non-Coding RNAs.
MA569677 - JP 2018138019-A/141603: Polycomb-Associated Non-Coding RNAs.
MA569678 - JP 2018138019-A/141604: Polycomb-Associated Non-Coding RNAs.
MA569679 - JP 2018138019-A/141605: Polycomb-Associated Non-Coding RNAs.
MA569680 - JP 2018138019-A/141606: Polycomb-Associated Non-Coding RNAs.
MA569681 - JP 2018138019-A/141607: Polycomb-Associated Non-Coding RNAs.
MA569682 - JP 2018138019-A/141608: Polycomb-Associated Non-Coding RNAs.
MA569683 - JP 2018138019-A/141609: Polycomb-Associated Non-Coding RNAs.
MA569684 - JP 2018138019-A/141610: Polycomb-Associated Non-Coding RNAs.
MA569686 - JP 2018138019-A/141612: Polycomb-Associated Non-Coding RNAs.
MA569687 - JP 2018138019-A/141613: Polycomb-Associated Non-Coding RNAs.
MA569690 - JP 2018138019-A/141616: Polycomb-Associated Non-Coding RNAs.
MA569693 - JP 2018138019-A/141619: Polycomb-Associated Non-Coding RNAs.
MA569694 - JP 2018138019-A/141620: Polycomb-Associated Non-Coding RNAs.
MA569696 - JP 2018138019-A/141622: Polycomb-Associated Non-Coding RNAs.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein Q96HE7 (Reactome details) participates in the following event(s):

R-HSA-3341296 GPX7,8 catalyze peroxidation of P4HB (PDI)
R-HSA-264997 Oxidation of cysteine to cystine in Proinsulin
R-HSA-3299685 Detoxification of Reactive Oxygen Species
R-HSA-264876 Insulin processing
R-HSA-2262752 Cellular responses to stress
R-HSA-2980736 Peptide hormone metabolism
R-HSA-8953897 Cellular responses to external stimuli
R-HSA-392499 Metabolism of proteins

-  Other Names for This Gene
  Alternate Gene Symbols: A8K9X4, A8MYW1, ENST00000395686.1, ENST00000395686.2, ENST00000395686.3, ENST00000395686.4, ENST00000395686.5, ENST00000395686.6, ENST00000395686.7, ERO1A , ERO1A_HUMAN, ERO1L, NM_014584, Q7LD45, Q96HE7, Q9P1Q9, Q9UKV6, uc318xpr.1, uc318xpr.2, UNQ434/PRO865
UCSC ID: ENST00000395686.8_7
RefSeq Accession: NM_014584.3
Protein: Q96HE7 (aka ERO1A_HUMAN or ER1A_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.