Human Gene DAXX (ENST00000374542.10_12) from GENCODE V47lift37
  Description: death domain associated protein, transcript variant 2 (from RefSeq NM_001350.5)
Gencode Transcript: ENST00000374542.10_12
Gencode Gene: ENSG00000204209.13_19
Transcript (Including UTRs)
   Position: hg19 chr6:33,286,335-33,290,736 Size: 4,402 Total Exon Count: 8 Strand: -
Coding Region
   Position: hg19 chr6:33,286,520-33,289,702 Size: 3,183 Coding Exon Count: 7 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr6:33,286,335-33,290,736)mRNA (may differ from genome)Protein (740 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
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HGNCMalacardsMGIOMIMPubMedReactome
UniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: DAXX_HUMAN
DESCRIPTION: RecName: Full=Death domain-associated protein 6; AltName: Full=Daxx; Short=hDaxx; AltName: Full=ETS1-associated protein 1; Short=EAP1; AltName: Full=Fas death domain-associated protein;
FUNCTION: Transcription corepressor known to repress transcriptional potential of several sumoylated transcription factors. Acts as an adapter protein in a MDM2-DAXX-USP7 complex by regulating the RING-finger E3 ligase MDM2 ubiquitination activity. Under non-stress condition, in association with the deubiquitinating USP7, prevents MDM2 self-ubiquitination and enhances the intrinsic E3 ligase activity of MDM2 towards TP53, thereby promoting TP53 ubiquitination and subsequent proteasomal degradation. Upon DNA damage, its association with MDM2 and USP7 is disrupted, resulting in increased MDM2 autoubiquitination and consequently, MDM2 degradation, which leads to TP53 stabilization. Proposed to mediate activation of the JNK pathway and apoptosis via MAP3K5 in response to signaling from TNFRSF6 and TGFBR2. Interaction with HSPB1/HSP27 may prevent interaction with TNFRSF6 and MAP3K5 and block DAXX-mediated apoptosis. In contrast, in lymphoid cells JNC activation and TNFRSF6-mediated apoptosis may not involve DAXX. Seems to regulate transcription in PML/POD/ND10 nuclear bodies together with PML and may influence TNFRSF6- dependent apoptosis thereby. Down-regulates basal and activated transcription. Seems to act as a transcriptional corepressor and inhibits PAX3 and ETS1 through direct protein-protein interaction. Modulates PAX5 activity. Its transcription repressor activity is modulated by recruiting it to subnuclear compartments like the nucleolus or PML/POD/ND10 nuclear bodies through interactions with MCSR1 and PML, respectively.
SUBUNIT: Homomultimer. Binds to the TNFRSF6 death domain via its C-terminus and to PAX5. Binds to SLC2A4/GLUT4, MAP3K5, TGFBR2, phosphorylated dimeric HSPB1/HSP27, CENPC1, ETS1, sumoylated PML, UBE2I and MCRS1. Is part of a complex containing PAX5 and CREBBP. Interacts with HIPK2 and HIPK3 via its N-terminus. Interacts with HIPK1, which induces translocation from PML/POD/ND10 nuclear bodies to chromatin and enhances association with HDAC1 (By similarity). The non-phosphorylated form binds to PAX3, PAX7, DEK, HDAC1, HDAC2, HDAC3, acetylated histone H4 and histones H2A, H2B, H3 and H4. Interacts with SPOP. Part of a complex consisting of DAXX, CUL3 and SPOP. Interacts with CBP; the interaction is dependent the sumoylation of CBP and suppresses CBP transcriptional activity via recruitment of HDAC2 directly in the complex with TP53 and HIPK2. Interacts with AXIN1; the interaction stimulates the interaction of DAXX with TP53, stimulates 'Ser-46' phosphorylation of TP53 on and induces cell death on UV irradiation. Interacts with HCMV tegument phosphoprotein pp71. Part of a complex with MDM2, DAXX, RASSF1 and USP7. Part of a complex with DAXX, MDM2 and USP7. Interacts (via N-terminus) with RASSF1 (via C-terminus); the interaction is independent of MDM2 and TP53. Interacts with MDM2; the interaction is direct. Interacts with USP7; the interaction is direct and independent of MDM2 and TP53. Interacts with TP53. Interacts with human cytomegalovirus/HHV-5 protein UL123.
INTERACTION: P03243:- (xeno); NbExp=4; IntAct=EBI-77321, EBI-1561361; O43918:AIRE; NbExp=5; IntAct=EBI-77321, EBI-1753081; P10275:AR; NbExp=5; IntAct=EBI-77321, EBI-608057; P46100:ATRX; NbExp=3; IntAct=EBI-77321, EBI-396461; Q8N726:CDKN2A; NbExp=8; IntAct=EBI-77321, EBI-625922; Q92793:CREBBP; NbExp=2; IntAct=EBI-77321, EBI-81215; P03244:E1B (xeno); NbExp=4; IntAct=EBI-77321, EBI-1561155; P14921-1:ETS1; NbExp=3; IntAct=EBI-287635, EBI-913224; P14921-2:ETS1; NbExp=2; IntAct=EBI-287635, EBI-913228; P25445:FAS; NbExp=2; IntAct=EBI-77321, EBI-494743; P25446:Fas (xeno); NbExp=4; IntAct=EBI-77321, EBI-296206; P02794:FTH1; NbExp=5; IntAct=EBI-77321, EBI-713259; Q13547:HDAC1; NbExp=2; IntAct=EBI-77321, EBI-301834; Q92769:HDAC2; NbExp=2; IntAct=EBI-77321, EBI-301821; O88904:Hipk1 (xeno); NbExp=3; IntAct=EBI-77321, EBI-692945; P04792:HSPB1; NbExp=3; IntAct=EBI-77321, EBI-352682; P15991:HSPB1 (xeno); NbExp=3; IntAct=EBI-77321, EBI-1559114; Q99683:MAP3K5; NbExp=6; IntAct=EBI-77321, EBI-476263; Q96EZ8:MCRS1; NbExp=7; IntAct=EBI-77321, EBI-348259; Q00987:MDM2; NbExp=14; IntAct=EBI-77321, EBI-389668; Q99497:PARK7; NbExp=3; IntAct=EBI-77321, EBI-1164361; Q02650:Pax5 (xeno); NbExp=4; IntAct=EBI-77321, EBI-296260; P29590:PML; NbExp=6; IntAct=EBI-77321, EBI-295890; P14672:SLC2A4; NbExp=7; IntAct=EBI-77321, EBI-367146; O43791:SPOP; NbExp=5; IntAct=EBI-77321, EBI-743549; P40763:STAT3; NbExp=4; IntAct=EBI-77321, EBI-518675; P63165:SUMO1; NbExp=5; IntAct=EBI-77321, EBI-80140; Q9NQB0:TCF7L2; NbExp=5; IntAct=EBI-77321, EBI-924724; P37173:TGFBR2; NbExp=2; IntAct=EBI-77321, EBI-296151; P04637:TP53; NbExp=11; IntAct=EBI-77321, EBI-366083; Q99816:TSG101; NbExp=4; IntAct=EBI-77321, EBI-346882; Q93009:USP7; NbExp=10; IntAct=EBI-77321, EBI-302474;
SUBCELLULAR LOCATION: Cytoplasm. Nucleus, nucleoplasm. Nucleus, PML body. Nucleus, nucleolus. Chromosome, centromere. Note=Dispersed throughout the nucleoplasm, in PML/POD/ND10 nuclear bodies, and in nucleoli. Colocalizes with a subset of interphase centromeres, but is absent from mitotic centromeres. Detected in cytoplasmic punctate structures. Translocates from the nucleus to the cytoplasm upon glucose deprivation or oxidative stress. Colocalizes with RASSF1 in the nucleus. Colocalizes with USP7 in nucleoplasma with accumulation in speckled structures.
TISSUE SPECIFICITY: Ubiquitous.
INDUCTION: Upon mitogenic stimulation by concanavalin-A.
DOMAIN: The Sumo interaction motif mediates Sumo binding, and is required both for sumoylation and binding to sumoylated targets.
PTM: Sumoylated with SUMO1 on multiple lysine residues.
PTM: Phosphorylated upon DNA damage, probably by ATM or ATR. Phosphorylated by HIPK1 upon glucose deprivation.
PTM: Polyubiquitinated; which is promoted by CUL3 and SPOP and results in proteasomal degradation. Ubiquitinated by MDM2; inducing its degradation. Deubiquitinated by USP7; leading to stabilize it.
SIMILARITY: Belongs to the DAXX family.
WEB RESOURCE: Name=Atlas of Genetics and Cytogenetics in Oncology and Haematology; URL="http://atlasgeneticsoncology.org//Genes/DAXXID40265ch6p21.html";

-  Primer design for this transcript
 

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-  MalaCards Disease Associations
  MalaCards Gene Search: DAXX
Diseases sorted by gene-association score: gastric neuroendocrine tumor* (25), thalassemias, alpha- (3)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 32.32 RPKM in Testis
Total median expression: 789.57 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -58.40150-0.389 Picture PostScript Text
3' UTR -45.00185-0.243 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR011989 - ARM-like
IPR005012 - Daxx

Pfam Domains:
PF03344 - Daxx N-terminal Rassf1C-interacting domain

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2KQS - NMR MuPIT 2KZS - NMR MuPIT 2KZU - NMR 4H9N - X-ray 4H9O - X-ray


ModBase Predicted Comparative 3D Structure on Q9UER7
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
 RGD    
      
      

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0002039 p53 binding
GO:0003713 transcription coactivator activity
GO:0003714 transcription corepressor activity
GO:0005057 signal transducer activity, downstream of receptor
GO:0005515 protein binding
GO:0008134 transcription factor binding
GO:0019899 enzyme binding
GO:0019901 protein kinase binding
GO:0030295 protein kinase activator activity
GO:0031072 heat shock protein binding
GO:0031625 ubiquitin protein ligase binding
GO:0032183 SUMO binding
GO:0042393 histone binding
GO:0042803 protein homodimerization activity
GO:0046982 protein heterodimerization activity
GO:0047485 protein N-terminus binding
GO:0050681 androgen receptor binding

Biological Process:
GO:0001934 positive regulation of protein phosphorylation
GO:0006325 chromatin organization
GO:0006334 nucleosome assembly
GO:0006338 chromatin remodeling
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006915 apoptotic process
GO:0007257 activation of JUN kinase activity
GO:0008625 extrinsic apoptotic signaling pathway via death domain receptors
GO:0016032 viral process
GO:0030521 androgen receptor signaling pathway
GO:0031396 regulation of protein ubiquitination
GO:0034605 cellular response to heat
GO:0034620 cellular response to unfolded protein
GO:0045860 positive regulation of protein kinase activity
GO:0045892 negative regulation of transcription, DNA-templated
GO:0071276 cellular response to cadmium ion
GO:0071280 cellular response to copper ion
GO:0072738 cellular response to diamide
GO:1901216 positive regulation of neuron death
GO:1903936 cellular response to sodium arsenite

Cellular Component:
GO:0000775 chromosome, centromeric region
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0016604 nuclear body
GO:0016605 PML body
GO:0070603 SWI/SNF superfamily-type complex


-  Descriptions from all associated GenBank mRNAs
  BC000220 - Homo sapiens death-domain associated protein, mRNA (cDNA clone IMAGE:3353019), partial cds.
AK223404 - Homo sapiens mRNA for death-associated protein 6 variant, clone: FCC108C03.
AF015956 - Homo sapiens Fas-binding protein Daxx mRNA, complete cds.
AK303767 - Homo sapiens cDNA FLJ55943 complete cds, highly similar to Death domain-associated protein 6.
AB015051 - Homo sapiens mRNA for Daxx, complete cds.
AF097742 - Homo sapiens ETS1 associated protein EAP1/Daxx mRNA, complete cds.
AF050179 - Homo sapiens CENP-C binding protein (DAXX) mRNA, complete cds.
BC073776 - Homo sapiens cDNA clone IMAGE:2988484, containing frame-shift errors.
AF006041 - Homo sapiens Fas-binding protein (DAXX) mRNA, partial cds.
AB209493 - Homo sapiens mRNA for death-associated protein 6 variant protein.
AF039136 - Homo sapiens Fas binding protein (hDaxx) mRNA, complete cds.
AK292187 - Homo sapiens cDNA FLJ77778 complete cds, highly similar to Homo sapiens death-associated protein 6 (DAXX), mRNA.
JD170733 - Sequence 151757 from Patent EP1572962.
BC109073 - Homo sapiens death-domain associated protein, mRNA (cDNA clone MGC:126245 IMAGE:40034214), complete cds.
BC109074 - Homo sapiens death-domain associated protein, mRNA (cDNA clone MGC:126246 IMAGE:40034219), complete cds.
JD422618 - Sequence 403642 from Patent EP1572962.
JD286226 - Sequence 267250 from Patent EP1572962.
AK303854 - Homo sapiens cDNA FLJ50943 complete cds, highly similar to Death domain-associated protein 6.
JD271876 - Sequence 252900 from Patent EP1572962.
HQ436528 - Homo sapiens death domain-associated protein isoform beta (DAXX) mRNA, complete cds, alternatively spliced.
HQ436529 - Homo sapiens death domain-associated protein isoform gamma (DAXX) mRNA, complete cds, alternatively spliced.
CR457085 - Homo sapiens full open reading frame cDNA clone RZPDo834B036D for gene DAXX, death-associated protein 6; complete cds, incl. stopcodon.
AK313034 - Homo sapiens cDNA, FLJ93506, highly similar to Homo sapiens death-associated protein 6 (DAXX), mRNA.
KJ891029 - Synthetic construct Homo sapiens clone ccsbBroadEn_00423 DAXX gene, encodes complete protein.
EU446949 - Synthetic construct Homo sapiens clone IMAGE:100069977; IMAGE:100012158; FLH257100.01L death-associated protein 6 (DAXX) gene, encodes complete protein.
AB527719 - Synthetic construct DNA, clone: pF1KB6228, Homo sapiens DAXX gene for death-domain associated protein, without stop codon, in Flexi system.
AK309612 - Homo sapiens cDNA, FLJ99653.

-  Biochemical and Signaling Pathways
  BioCarta from NCI Cancer Genome Anatomy Project
h_fasPathway - FAS signaling pathway ( CD95 )
h_keratinocytePathway - Keratinocyte Differentiation
h_mapkPathway - MAPKinase Signaling Pathway
h_hsp27Pathway - Stress Induction of HSP Regulation
h_pmlPathway - Regulation of transcriptional activity by PML
h_HivnefPathway - HIV-I Nef: negative effector of Fas and TNF
h_p38mapkPathway - p38 MAPK Signaling Pathway

Reactome (by CSHL, EBI, and GO)

Protein Q9UER7 (Reactome details) participates in the following event(s):

R-HSA-3222072 DAXX binds Ub-MDM2 and USP7
R-HSA-3215295 USP7 deubiquitinates MDM2
R-HSA-6804757 Regulation of TP53 Degradation
R-HSA-6806003 Regulation of TP53 Expression and Degradation
R-HSA-5633007 Regulation of TP53 Activity
R-HSA-3700989 Transcriptional Regulation by TP53
R-HSA-212436 Generic Transcription Pathway
R-HSA-73857 RNA Polymerase II Transcription
R-HSA-74160 Gene expression (Transcription)

-  Other Names for This Gene
  Alternate Gene Symbols: B4E1I3, BING2, DAP6, DAXX_HUMAN, ENST00000374542.1, ENST00000374542.2, ENST00000374542.3, ENST00000374542.4, ENST00000374542.5, ENST00000374542.6, ENST00000374542.7, ENST00000374542.8, ENST00000374542.9, F5ANJ6, F5ANJ7, F5H082, NM_001350, O14747, O15141, O15208, Q5STK9, Q9BWI3, Q9UER7, uc318lqy.1, uc318lqy.2
UCSC ID: ENST00000374542.10_12
RefSeq Accession: NM_001141969.2
Protein: Q9UER7 (aka DAXX_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.