Human Gene CNTRL (ENST00000373845.6_1) from GENCODE V47lift37

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Description: centriolin (from HGNC CNTRL)
Gencode Transcript: ENST00000373845.6_1
Gencode Gene: ENSG00000119397.19_15
Transcript (Including UTRs)
Position: hg19 chr9:123,914,321-123,939,888 Size: 25,568 Total Exon Count: 19 Strand: +

Page Index	Sequence and Links	Primers	MalaCards	CTD	RNA-Seq Expression
Microarray Expression	Other Species	mRNA Descriptions	Other Names	Model Information	Methods

Data last updated at UCSC: 2024-08-22 23:36:26

Sequence and Links to Tools and Databases

Genomic Sequence (chr9:123,914,321-123,939,888)			mRNA (may differ from genome)		No protein
Gene Sorter	Genome Browser	Other Species FASTA	VisiGene	Gene interactions	Table Schema
BioGPS	Ensembl	ExonPrimer	HGNC	Malacards	PubMed
Wikipedia

Primer design for this transcript

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3

MalaCards Disease Associations


	MalaCards Gene Search: CNTRL Diseases sorted by gene-association score: hypertrophy of breast (5), 8p11 myeloproliferative syndrome (5)

Comparative Toxicogenomics Database (CTD)


	The following chemicals interact with this gene C014347 decitabine

RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)


	Highest median expression: 21.13 RPKM in Testis Total median expression: 173.78 RPKM View in GTEx track of Genome Browser View at GTEx portal View GTEx Body Map

Microarray Expression Data


	Press "+" in the title bar above to open this section.

Orthologous Genes in Other Species

Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.

Mouse	Rat	Zebrafish	D. melanogaster	C. elegans	S. cerevisiae
No ortholog	No ortholog	No ortholog	No ortholog	No ortholog	No ortholog

Descriptions from all associated GenBank mRNAs


	BC137284 - Homo sapiens centrosomal protein 110kDa, mRNA (cDNA clone MGC:168904 IMAGE:9021281), complete cds. BC137286 - Homo sapiens centrosomal protein 110kDa, mRNA (cDNA clone MGC:168906 IMAGE:9021283), complete cds. AF513978 - Homo sapiens CENTRIOLIN mRNA, complete cds. AK128098 - Homo sapiens cDNA FLJ46219 fis, clone TESTI4013742, moderately similar to Mus musculus antigen identified by monoclonal antibody 2A8 (Ma2a8). AY651261 - Homo sapiens centrosomal protein 1 (CEP1) mRNA, partial cds. AK074079 - Homo sapiens mRNA for FLJ00150 protein. AK090600 - Homo sapiens cDNA FLJ33281 fis, clone ASTRO2009068, moderately similar to M.musculus mRNA for IB3/5-polypeptide. AX746527 - Sequence 52 from Patent EP1308459. BC002932 - Homo sapiens centrosomal protein 110kDa, mRNA (cDNA clone IMAGE:3956474), partial cds. BC009287 - Homo sapiens centrosomal protein 110kDa, mRNA (cDNA clone IMAGE:4123463). AK093457 - Homo sapiens cDNA FLJ36138 fis, clone TESTI2024864, highly similar to Homo sapiens centriole associated protein CEP110 mRNA. AK297330 - Homo sapiens cDNA FLJ56633 partial cds, highly similar to Homo sapiens centrosomal protein 110 kDa (CEP110), mRNA. AF083322 - Homo sapiens centriole associated protein CEP110 mRNA, complete cds. JD085420 - Sequence 66444 from Patent EP1572962. JD274444 - Sequence 255468 from Patent EP1572962. JD208220 - Sequence 189244 from Patent EP1572962. JD147403 - Sequence 128427 from Patent EP1572962. JD503557 - Sequence 484581 from Patent EP1572962. BX640927 - Homo sapiens mRNA; cDNA DKFZp779F1270 (from clone DKFZp779F1270). AL080231 - Homo sapiens mRNA; cDNA DKFZp434N168 (from clone DKFZp434N168). JD536568 - Sequence 517592 from Patent EP1572962. JD303408 - Sequence 284432 from Patent EP1572962. JD324756 - Sequence 305780 from Patent EP1572962. JD046718 - Sequence 27742 from Patent EP1572962.

Other Names for This Gene


	Alternate Gene Symbols: AF083322, ENST00000373845.1, ENST00000373845.2, ENST00000373845.3, ENST00000373845.4, ENST00000373845.5, uc318lcm.1 UCSC ID: ENST00000373845.6_1 RefSeq Accession: NM_001330762.2

Gene Model Information


	Click here for a detailed description of the fields of the table above.

Methods, Credits, and Use Restrictions


	Click here for details on how this gene model was made and data restrictions if any.