Human Gene CEP131 (ENST00000269392.8_8) from GENCODE V47lift37
  Description: centrosomal protein 131, transcript variant 3 (from RefSeq NM_001319228.2)
Gencode Transcript: ENST00000269392.8_8
Gencode Gene: ENSG00000141577.14_15
Transcript (Including UTRs)
   Position: hg19 chr17:79,163,396-79,196,799 Size: 33,404 Total Exon Count: 26 Strand: -
Coding Region
   Position: hg19 chr17:79,163,569-79,193,856 Size: 30,288 Coding Exon Count: 25 

Page IndexSequence and LinksUniProtKB CommentsPrimersGene AllelesRNA-Seq Expression
Microarray ExpressionRNA StructureProtein StructureOther SpeciesGO AnnotationsmRNA Descriptions
PathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr17:79,163,396-79,196,799)mRNA (may differ from genome)Protein (1083 aa)
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MGIOMIMPubMedReactomeUniProtKBWikipedia
BioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: AZI1_HUMAN
DESCRIPTION: RecName: Full=5-azacytidine-induced protein 1; AltName: Full=Centrosomal protein of 131 kDa; Short=Cep131; AltName: Full=Pre-acrosome localization protein 1;
FUNCTION: May play a role in spermatogenesis (By similarity).
SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton, centrosome.
PTM: Phosphorylated upon DNA damage, probably by ATM or ATR.
SIMILARITY: Contains 1 IQ domain.
SEQUENCE CAUTION: Sequence=BAA83070.1; Type=Erroneous initiation; Note=Translation N-terminally shortened;

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 17.56 RPKM in Testis
Total median expression: 240.69 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -132.20248-0.533 Picture PostScript Text
3' UTR -66.60173-0.385 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  ModBase Predicted Comparative 3D Structure on Q9UPN4
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details Gene Details  
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0005515 protein binding
GO:0042803 protein homodimerization activity
GO:0044877 macromolecular complex binding

Biological Process:
GO:0000086 G2/M transition of mitotic cell cycle
GO:0007049 cell cycle
GO:0007275 multicellular organism development
GO:0007283 spermatogenesis
GO:0008284 positive regulation of cell proliferation
GO:0010389 regulation of G2/M transition of mitotic cell cycle
GO:0010824 regulation of centrosome duplication
GO:0030030 cell projection organization
GO:0030154 cell differentiation
GO:0035735 intraciliary transport involved in cilium assembly
GO:0071539 protein localization to centrosome
GO:0090316 positive regulation of intracellular protein transport
GO:0097711 ciliary basal body docking

Cellular Component:
GO:0001669 acrosomal vesicle
GO:0005737 cytoplasm
GO:0005813 centrosome
GO:0005815 microtubule organizing center
GO:0005829 cytosol
GO:0005856 cytoskeleton
GO:0015630 microtubule cytoskeleton
GO:0031410 cytoplasmic vesicle
GO:0034451 centriolar satellite
GO:0035869 ciliary transition zone
GO:0042995 cell projection
GO:0043231 intracellular membrane-bounded organelle
GO:0045171 intercellular bridge


-  Descriptions from all associated GenBank mRNAs
  AB029041 - Homo sapiens KIAA1118 mRNA for KIAA1118 protein.
BC010413 - Homo sapiens 5-azacytidine induced 1, mRNA (cDNA clone IMAGE:3841026), partial cds.
BC011615 - Homo sapiens 5-azacytidine induced 1, mRNA (cDNA clone IMAGE:3945607), partial cds.
BC012130 - Homo sapiens 5-azacytidine induced 1, mRNA (cDNA clone IMAGE:4634709), with apparent retained intron.
BC136578 - Homo sapiens 5-azacytidine induced 1, mRNA (cDNA clone MGC:168191 IMAGE:9020568), complete cds.
BC136580 - Homo sapiens 5-azacytidine induced 1, mRNA (cDNA clone MGC:168193 IMAGE:9020570), complete cds.
BC144263 - Homo sapiens cDNA clone IMAGE:9052783, containing frame-shift errors.
BC040023 - Homo sapiens 5-azacytidine induced 1, mRNA (cDNA clone IMAGE:4151393), with apparent retained intron.
JD173745 - Sequence 154769 from Patent EP1572962.
JD539921 - Sequence 520945 from Patent EP1572962.
JD435160 - Sequence 416184 from Patent EP1572962.
JD269944 - Sequence 250968 from Patent EP1572962.
JD520563 - Sequence 501587 from Patent EP1572962.
JD508748 - Sequence 489772 from Patent EP1572962.
JD489879 - Sequence 470903 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein Q9UPN4 (Reactome details) participates in the following event(s):

R-HSA-380272 Plk1-mediated phosphorylation of Nlp
R-HSA-380283 Recruitment of additional gamma tubulin/ gamma TuRC to the centrosome
R-HSA-380294 Loss of C-Nap-1 from centrosomes
R-HSA-380311 Recruitment of Plk1 to centrosomes
R-HSA-380455 Recruitment of CDK11p58 to the centrosomes
R-HSA-380303 Dissociation of Phospho-Nlp from the centrosome
R-HSA-5626220 C2CD3 binds the mother centriole
R-HSA-380508 Translocation of NuMA to the centrosomes
R-HSA-2574845 AJUBA binds centrosome-associated AURKA
R-HSA-8853405 TPX2 binds AURKA at centrosomes
R-HSA-3000319 BORA binds PLK1 and AURKA
R-HSA-2574840 AJUBA facilitates AURKA autophosphorylation
R-HSA-3000310 AURKA phosphorylates PLK1
R-HSA-5626223 C2CD3 and OFD1 recruit 5 distal appendage proteins to the centriole
R-HSA-5626681 Recruitment of transition zone proteins
R-HSA-5626227 CP110 and CEP97 dissociate from the centriole
R-HSA-380316 Association of NuMA with microtubules
R-HSA-8853419 TPX2 promotes AURKA autophosphorylation
R-HSA-5626228 The distal appendage proteins recruit TTBK2
R-HSA-5638009 CEP164 recruits RAB3IP-carrying Golgi-derived vesicles to the basal body
R-HSA-5626699 MARK4 binds ODF2 in the centriole
R-HSA-5617816 RAB3IP stimulates nucleotide exchange on RAB8A
R-HSA-380259 Loss of Nlp from mitotic centrosomes
R-HSA-380270 Recruitment of mitotic centrosome proteins and complexes
R-HSA-380284 Loss of proteins required for interphase microtubule organization from the centrosome
R-HSA-5620912 Anchoring of the basal body to the plasma membrane
R-HSA-380320 Recruitment of NuMA to mitotic centrosomes
R-HSA-2565942 Regulation of PLK1 Activity at G2/M Transition
R-HSA-8854518 AURKA Activation by TPX2
R-HSA-380287 Centrosome maturation
R-HSA-5617833 Cilium Assembly
R-HSA-68877 Mitotic Prometaphase
R-HSA-69275 G2/M Transition
R-HSA-1852241 Organelle biogenesis and maintenance
R-HSA-68886 M Phase
R-HSA-453274 Mitotic G2-G2/M phases
R-HSA-69278 Cell Cycle (Mitotic)
R-HSA-1640170 Cell Cycle

-  Other Names for This Gene
  Alternate Gene Symbols: A6NHI8, AZI1, B2RN11, CP131_HUMAN, ENST00000269392.1, ENST00000269392.2, ENST00000269392.3, ENST00000269392.4, ENST00000269392.5, ENST00000269392.6, ENST00000269392.7, KIAA1118, NM_001319228, Q96F50, Q9UPN4, uc317irj.1, uc317irj.2
UCSC ID: ENST00000269392.8_8
RefSeq Accession: NM_001319228.2
Protein: Q9UPN4 (aka AZI1_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.