Human Gene BAG5 (ENST00000299204.6_9) from GENCODE V47lift37
  Description: BAG cochaperone 5, transcript variant 3 (from RefSeq NM_001015048.3)
Gencode Transcript: ENST00000299204.6_9
Gencode Gene: ENSG00000166170.12_11
Transcript (Including UTRs)
   Position: hg19 chr14:104,022,888-104,028,994 Size: 6,107 Total Exon Count: 2 Strand: -
Coding Region
   Position: hg19 chr14:104,026,158-104,027,501 Size: 1,344 Coding Exon Count: 1 

Page IndexSequence and LinksUniProtKB CommentsPrimersCTDGene Alleles
RNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr14:104,022,888-104,028,994)mRNA (may differ from genome)Protein (447 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMGIOMIMPubMedReactomeUniProtKB
WikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: BAG5_HUMAN
DESCRIPTION: RecName: Full=BAG family molecular chaperone regulator 5; Short=BAG-5; AltName: Full=Bcl-2-associated athanogene 5;
FUNCTION: Inhibits both auto-ubiquitination of PARK2 and ubiquitination of target proteins by PARK2 (By similarity). May function as a nucleotide exchange factor for HSP/HSP70, promoting ADP release, and activating Hsp70-mediated refolding.
SUBUNIT: Binds to the ATPase domain of HSP/HSC70 chaperones. Binds PARK2 (By similarity).
DOMAIN: The fifth BAG domain is responsible for the interaction with HSP70 nucleotide-binding domain.
SIMILARITY: Contains 5 BAG domains.
SEQUENCE CAUTION: Sequence=BAA74896.1; Type=Erroneous initiation;

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 59.83 RPKM in Testis
Total median expression: 522.99 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -22.1070-0.316 Picture PostScript Text
3' UTR -882.103270-0.270 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR003103 - BAG_domain

Pfam Domains:
PF02179 - BAG domain

SCOP Domains:
63491 - BAG domain

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2D9D - NMR MuPIT 3A8Y - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on Q9UL15
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
      
      
      

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000774 adenyl-nucleotide exchange factor activity
GO:0005515 protein binding
GO:0019901 protein kinase binding
GO:0031625 ubiquitin protein ligase binding
GO:0051087 chaperone binding

Biological Process:
GO:0006457 protein folding
GO:0007030 Golgi organization
GO:0010977 negative regulation of neuron projection development
GO:0031397 negative regulation of protein ubiquitination
GO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0050821 protein stabilization
GO:0051438 regulation of ubiquitin-protein transferase activity
GO:0051444 negative regulation of ubiquitin-protein transferase activity
GO:0061084 negative regulation of protein refolding
GO:0070997 neuron death
GO:0090083 regulation of inclusion body assembly
GO:1900034 regulation of cellular response to heat
GO:1902176 negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway

Cellular Component:
GO:0005634 nucleus
GO:0005739 mitochondrion
GO:0005829 cytosol
GO:0016020 membrane
GO:0016234 inclusion body
GO:0048471 perinuclear region of cytoplasm


-  Descriptions from all associated GenBank mRNAs
  AB105186 - Homo sapiens BAG5 mRNA for BCL2-associated athanogene 5, complete cds.
AK001378 - Homo sapiens cDNA FLJ10516 fis, clone NT2RP2000809, highly similar to Homo sapiens mRNA for KIAA0873 protein.
AF095195 - Homo sapiens BAG-family molecular chaperone regulator-5 mRNA, complete cds.
AB020680 - Homo sapiens KIAA0873 mRNA for KIAA0873 protein.
AK023145 - Homo sapiens cDNA FLJ13083 fis, clone NT2RP3002062, highly similar to Homo sapiens BAG-family molecular chaperone regulator-5 mRNA.
JD165965 - Sequence 146989 from Patent EP1572962.
JD557886 - Sequence 538910 from Patent EP1572962.
JD553527 - Sequence 534551 from Patent EP1572962.
JD183754 - Sequence 164778 from Patent EP1572962.
JD558022 - Sequence 539046 from Patent EP1572962.
JD407228 - Sequence 388252 from Patent EP1572962.
JD116612 - Sequence 97636 from Patent EP1572962.
JD495875 - Sequence 476899 from Patent EP1572962.
JD307562 - Sequence 288586 from Patent EP1572962.
JD284453 - Sequence 265477 from Patent EP1572962.
JD231287 - Sequence 212311 from Patent EP1572962.
JD081631 - Sequence 62655 from Patent EP1572962.
JD124307 - Sequence 105331 from Patent EP1572962.
JD311829 - Sequence 292853 from Patent EP1572962.
JD505512 - Sequence 486536 from Patent EP1572962.
JD072134 - Sequence 53158 from Patent EP1572962.
JD505510 - Sequence 486534 from Patent EP1572962.
JD099712 - Sequence 80736 from Patent EP1572962.
JD116304 - Sequence 97328 from Patent EP1572962.
JD334439 - Sequence 315463 from Patent EP1572962.
JD375728 - Sequence 356752 from Patent EP1572962.
JD388777 - Sequence 369801 from Patent EP1572962.
JD296702 - Sequence 277726 from Patent EP1572962.
JD074274 - Sequence 55298 from Patent EP1572962.
JD250545 - Sequence 231569 from Patent EP1572962.
JD056511 - Sequence 37535 from Patent EP1572962.
JD094023 - Sequence 75047 from Patent EP1572962.
JD100181 - Sequence 81205 from Patent EP1572962.
JD389376 - Sequence 370400 from Patent EP1572962.
JD260105 - Sequence 241129 from Patent EP1572962.
JD304238 - Sequence 285262 from Patent EP1572962.
CQ873770 - Sequence 189 from Patent WO2004076622.
DD413607 - Regulation of Mammalian Cells.
JD227937 - Sequence 208961 from Patent EP1572962.
JD421253 - Sequence 402277 from Patent EP1572962.
JD198898 - Sequence 179922 from Patent EP1572962.
JD502816 - Sequence 483840 from Patent EP1572962.
JD469627 - Sequence 450651 from Patent EP1572962.
JD322689 - Sequence 303713 from Patent EP1572962.
JD504695 - Sequence 485719 from Patent EP1572962.
JD058754 - Sequence 39778 from Patent EP1572962.
JD503176 - Sequence 484200 from Patent EP1572962.
JD083809 - Sequence 64833 from Patent EP1572962.
JD082882 - Sequence 63906 from Patent EP1572962.
JD403941 - Sequence 384965 from Patent EP1572962.
JD565920 - Sequence 546944 from Patent EP1572962.
JD551179 - Sequence 532203 from Patent EP1572962.
JD066945 - Sequence 47969 from Patent EP1572962.
AK291312 - Homo sapiens cDNA FLJ77290 complete cds, highly similar to Homo sapiens BCL2-associated athanogene 5 (BAG5), mRNA.
BC044216 - Homo sapiens BCL2-associated athanogene 5, mRNA (cDNA clone MGC:49902 IMAGE:5745133), complete cds.
AK225730 - Homo sapiens mRNA for BCL2-associated athanogene 5 isoform a variant, clone: TST01208.
BC050551 - Homo sapiens BCL2-associated athanogene 5, mRNA (cDNA clone MGC:57645 IMAGE:5744362), complete cds.
JD046835 - Sequence 27859 from Patent EP1572962.
AK225741 - Homo sapiens mRNA for BCL2-associated athanogene 5 isoform a variant, clone: TST06317.
JD353581 - Sequence 334605 from Patent EP1572962.
JD515684 - Sequence 496708 from Patent EP1572962.
JD147107 - Sequence 128131 from Patent EP1572962.
KJ898045 - Synthetic construct Homo sapiens clone ccsbBroadEn_07439 BAG5 gene, encodes complete protein.
AB384026 - Synthetic construct DNA, clone: pF1KSDA0873, Homo sapiens BAG5 gene for BAG family molecular chaperone regulator 5, complete cds, without stop codon, in Flexi system.
CU690720 - Synthetic construct Homo sapiens gateway clone IMAGE:100021382 5' read BAG5 mRNA.
AB362576 - Homo sapiens BAG5 mRNA for BCL2-associated athanogene 5, partial cds, splicing variant 1.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein Q9UL15 (Reactome details) participates in the following event(s):

R-HSA-5252079 HSP110s exchange ATP for ADP on HSP70s:ADP
R-HSA-3371453 Regulation of HSF1-mediated heat shock response
R-HSA-3371556 Cellular response to heat stress
R-HSA-2262752 Cellular responses to stress
R-HSA-8953897 Cellular responses to external stimuli

-  Other Names for This Gene
  Alternate Gene Symbols: BAG5_HUMAN, ENST00000299204.1, ENST00000299204.2, ENST00000299204.3, ENST00000299204.4, ENST00000299204.5, KIAA0873, NM_001015048, O94950, Q86W59, Q9UL15, uc317mih.1, uc317mih.2
UCSC ID: ENST00000299204.6_9
RefSeq Accession: NM_001015048.3
Protein: Q9UL15 (aka BAG5_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.