Gene interactions and pathways from curated databases and text-mining
Genomics 1999, PMID: 10486209

Cloning, sequence analysis, and chromosomal localization of the novel human integrin alpha11 subunit (ITGA11).

Lehnert, K; Ni, J; Leung, E; Gough, S M; Weaver, A; Yao, W P; Liu, D; Wang, S X; Morris, C M; Krissansen, G W

The integrins are a large family of cell adhesion molecules consisting of noncovalently associated alphabeta heterodimers. We have cloned and sequenced the cDNA of a novel human integrin alpha-subunit, designated alpha11. The alpha11 cDNA encodes a mature protein with a large 1120-residue extracellular domain that contains an I-domain of 207 residues and is linked by a transmembrane domain to a short cytoplasmic domain of 24 amino acids. The deduced alpha11 protein shows the typical structural features of integrin alpha-subunits and is similar to a distinct group of alpha-subunits from collagen-binding integrins. However, it differs from most integrin alpha-chains by an incompletely preserved cytoplasmic GFFKR motif. The human ITGA11 gene was localized to bands q22.3-q23 on chromosome 15, and its transcripts were found in a variety of tissues, but predominantly in bone, cartilage, cardiac muscle, and skeletal muscle. Expression of a 5.5-kb alpha11 mRNA was detectable in small intestine.

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Text Mining Data

Dashed line = No text mining data

Manually curated Databases

  • Gene Ontology Complexes integrin complex: integrin complex complex (ITGAX-ITGB1-ITGB2-ITGB5-ITGB7-ITGB6-ITGA9-ITGA2B-ITGA2-ITGA3-ITGA4-ITGAV-ITGA10-ITGA8-ITGA6-ITGB8-ITGA1-ITGA11-ITGAD-ITGAE)
  • IRef Hprd Interaction: ITGB1 — ITGA11 (in vitro)
  • IRef Hprd Interaction: ITGB1 — ITGA11 (in vivo)
  • IRef Ophid Interaction: ITGB1 — ITGA11 (aggregation, confirmational text mining)
In total, 190 gene pairs are associated to this article in curated databases