Human Gene ST14 (ENST00000278742.6_4) from GENCODE V47lift37
  Description: ST14 transmembrane serine protease matriptase (from RefSeq NM_021978.4)
Gencode Transcript: ENST00000278742.6_4
Gencode Gene: ENSG00000149418.11_7
Transcript (Including UTRs)
   Position: hg19 chr11:130,029,677-130,080,257 Size: 50,581 Total Exon Count: 19 Strand: +
Coding Region
   Position: hg19 chr11:130,029,875-130,079,718 Size: 49,844 Coding Exon Count: 19 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr11:130,029,677-130,080,257)mRNA (may differ from genome)Protein (855 aa)
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-  Comments and Description Text from UniProtKB
  ID: ST14_HUMAN
DESCRIPTION: RecName: Full=Suppressor of tumorigenicity 14 protein; EC=3.4.21.109; AltName: Full=Matriptase; AltName: Full=Membrane-type serine protease 1; Short=MT-SP1; AltName: Full=Prostamin; AltName: Full=Serine protease 14; AltName: Full=Serine protease TADG-15; AltName: Full=Tumor-associated differentially-expressed gene 15 protein;
FUNCTION: Degrades extracellular matrix. Proposed to play a role in breast cancer invasion and metastasis. Exhibits trypsin-like activity as defined by cleavage of synthetic substrates with Arg or Lys as the P1 site.
CATALYTIC ACTIVITY: Cleaves various synthetic substrates with Arg or Lys at the P1 position and prefers small side-chain amino acids, such as Ala and Gly, at the P2 position.
SUBUNIT: Interacts with CDCP1. May interact with TMEFF1.
SUBCELLULAR LOCATION: Membrane; Single-pass type II membrane protein (Probable).
DISEASE: Defects in ST14 are a cause of ichthyosis autosomal recessive with hypotrichosis (ARIH) [MIM:610765]. ARIH is a skin disorder characterized by congenital ichthyosis associated with the presence of less than the normal amount of hair.
SIMILARITY: Belongs to the peptidase S1 family.
SIMILARITY: Contains 2 CUB domains.
SIMILARITY: Contains 4 LDL-receptor class A domains.
SIMILARITY: Contains 1 peptidase S1 domain.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: ST14
Diseases sorted by gene-association score: ichthyosis, congenital, autosomal recessive 11* (1585), st14-related autosomal recessive congenital ichthyosis* (500), ichthyosis, follicular (10), ichthyosis, congenital, autosomal recessive 7 (9), autosomal recessive congenital ichthyosis (8), ichthyosis (7), red-green color blindness (7), microcytic anemia (7), ichthyosis, congenital, autosomal recessive 1 (5), congenital ichthyosiform erythroderma (5), prostate cancer (3), breast cancer (2), ovarian cancer, somatic (2)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 123.02 RPKM in Colon - Transverse
Total median expression: 673.55 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -96.40198-0.487 Picture PostScript Text
3' UTR -220.60539-0.409 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR000859 - CUB
IPR023415 - LDLR_class-A_CS
IPR002172 - LDrepeatLR_classA_rpt
IPR009003 - Pept_cys/ser_Trypsin-like
IPR018114 - Peptidase_S1/S6_AS
IPR001254 - Peptidase_S1_S6
IPR017051 - Peptidase_S1A_matripase
IPR000082 - SEA

Pfam Domains:
PF00057 - Low-density lipoprotein receptor domain class A
PF00089 - Trypsin
PF00431 - CUB domain
PF01390 - SEA domain
PF02408 - CUB-like domain

SCOP Domains:
49854 - Spermadhesin, CUB domain
50494 - Trypsin-like serine proteases
50969 - YVTN repeat-like/Quinoprotein amine dehydrogenase
82671 - SEA domain
57424 - LDL receptor-like module

Protein Data Bank (PDB) 3-D Structure
MuPIT help
1EAW - X-ray MuPIT 1EAX - X-ray MuPIT 2FMV - Model 2GV6 - X-ray MuPIT 2GV7 - X-ray MuPIT 3BN9 - X-ray MuPIT 3NCL - X-ray MuPIT 3NPS - X-ray MuPIT 3P8F - X-ray MuPIT 3P8G - X-ray MuPIT 3SO3 - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on Q9Y5Y6
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details Gene Details  
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0004175 endopeptidase activity
GO:0004252 serine-type endopeptidase activity
GO:0008233 peptidase activity
GO:0008236 serine-type peptidase activity
GO:0016787 hydrolase activity

Biological Process:
GO:0001843 neural tube closure
GO:0006508 proteolysis
GO:0030216 keratinocyte differentiation
GO:0060672 epithelial cell morphogenesis involved in placental branching
GO:0070268 cornification

Cellular Component:
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0016323 basolateral plasma membrane
GO:0019897 extrinsic component of plasma membrane


-  Descriptions from all associated GenBank mRNAs
  AK314173 - Homo sapiens cDNA, FLJ94888, highly similar to Homo sapiens suppression of tumorigenicity 14 (colon carcinoma, matriptase, epithin) (ST14), mRNA.
BC030532 - Homo sapiens suppression of tumorigenicity 14 (colon carcinoma), mRNA (cDNA clone MGC:40392 IMAGE:5213189), complete cds.
AF118224 - Homo sapiens matriptase mRNA, complete cds.
AF133086 - Homo sapiens membrane-type serine protease 1 mRNA, complete cds.
AF057145 - Homo sapiens serine protease TADG15 mRNA, complete cds.
AB030036 - Homo sapiens mRNA for prostamin, complete cds.
KJ897612 - Synthetic construct Homo sapiens clone ccsbBroadEn_07006 ST14 gene, encodes complete protein.
KR710824 - Synthetic construct Homo sapiens clone CCSBHm_00017522 ST14 (ST14) mRNA, encodes complete protein.
DQ894442 - Synthetic construct Homo sapiens clone IMAGE:100008902; FLH178764.01L; RZPDo839G11127D suppression of tumorigenicity 14 (colon carcinoma) (ST14) gene, encodes complete protein.
DQ891626 - Synthetic construct clone IMAGE:100004256; FLH178768.01X; RZPDo839G11128D suppression of tumorigenicity 14 (colon carcinoma) (ST14) gene, encodes complete protein.
AB528443 - Synthetic construct DNA, clone: pF1KB8486, Homo sapiens ST14 gene for suppression of tumorigenicity 14, without stop codon, in Flexi system.
CU688892 - Synthetic construct Homo sapiens gateway clone IMAGE:100023465 5' read ST14 mRNA.
U20428 - Human SNC19 mRNA sequence.
JD105745 - Sequence 86769 from Patent EP1572962.
AK302454 - Homo sapiens cDNA FLJ53766 complete cds, highly similar to Suppressor of tumorigenicity protein 14 (EC3.4.21.-).
BC005826 - Homo sapiens suppression of tumorigenicity 14 (colon carcinoma), mRNA (cDNA clone IMAGE:2960020), partial cds.
BC018146 - Homo sapiens suppression of tumorigenicity 14 (colon carcinoma), mRNA (cDNA clone IMAGE:3847116), partial cds.
JD026786 - Sequence 7810 from Patent EP1572962.
JD019709 - Sequence 733 from Patent EP1572962.
JD106349 - Sequence 87373 from Patent EP1572962.
JD461492 - Sequence 442516 from Patent EP1572962.
JD110158 - Sequence 91182 from Patent EP1572962.
JD486429 - Sequence 467453 from Patent EP1572962.
JD120808 - Sequence 101832 from Patent EP1572962.
JD104402 - Sequence 85426 from Patent EP1572962.
JD515849 - Sequence 496873 from Patent EP1572962.
JD059083 - Sequence 40107 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein Q9Y5Y6 (Reactome details) participates in the following event(s):

R-HSA-8849826 ST14 hydrolyzes and activates KLK5
R-HSA-8849797 Membrane proteases cleave Profilaggrin producing Filaggrin
R-HSA-6809371 Formation of the cornified envelope
R-HSA-6805567 Keratinization
R-HSA-1266738 Developmental Biology

-  Other Names for This Gene
  Alternate Gene Symbols: ENST00000278742.1, ENST00000278742.2, ENST00000278742.3, ENST00000278742.4, ENST00000278742.5, NM_021978, PRSS14, Q9BS01, Q9H3S0, Q9HB36, Q9HCA3, Q9Y5Y6, SNC19, ST14_HUMAN, TADG15, uc317jpl.1, uc317jpl.2
UCSC ID: ENST00000278742.6_4
RefSeq Accession: NM_021978.4
Protein: Q9Y5Y6 (aka ST14_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.