Human Gene KISS1R (ENST00000234371.10_4) from GENCODE V47lift37
  Description: KISS1 receptor (from RefSeq NM_032551.5)
Gencode Transcript: ENST00000234371.10_4
Gencode Gene: ENSG00000116014.10_7
Transcript (Including UTRs)
   Position: hg19 chr19:917,333-921,005 Size: 3,673 Total Exon Count: 5 Strand: +
Coding Region
   Position: hg19 chr19:917,503-920,748 Size: 3,246 Coding Exon Count: 5 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsPathwaysOther NamesGeneReviewsModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr19:917,333-921,005)mRNA (may differ from genome)Protein (398 aa)
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-  Comments and Description Text from UniProtKB
  ID: KISSR_HUMAN
DESCRIPTION: RecName: Full=KiSS-1 receptor; Short=KiSS-1R; AltName: Full=G-protein coupled receptor 54; AltName: Full=G-protein coupled receptor OT7T175; Short=hOT7T175; AltName: Full=Hypogonadotropin-1; AltName: Full=Kisspeptins receptor; AltName: Full=Metastin receptor;
FUNCTION: Receptor for metastin (kisspeptin-54 or kp-54), a C- terminally amidated peptide of KiSS1. KiSS1 is a metastasis suppressor protein that suppresses metastases in malignant melanomas and in some breast carcinomas without affecting tumorigenicity. The metastasis suppressor properties may be mediated in part by cell cycle arrest and induction of apoptosis in malignant cells. The receptor is essential for normal gonadotropin-released hormone physiology and for puberty. The hypothalamic KiSS1/KISS1R system is a pivotal factor in central regulation of the gonadotropic axis at puberty and in adulthood. The receptor is also probably involved in the regulation and fine- tuning of trophoblast invasion generated by the trophoblast itself. Analysis of the transduction pathways activated by the receptor identifies coupling to phospholipase C and intracellular calcium release through pertussis toxin-insensitive G(q) proteins.
SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein.
TISSUE SPECIFICITY: Most highly expressed in the pancreas, placenta and spinal cord, with lower-level of expression in peripheral blood leukocytes, kidney, lung, fetal liver, stomach, small intestine, testes, spleen, thymus, adrenal glands and lymph nodes. In the adult brain, expressed in the superior frontal gyrus, putamen, caudate nucleus, cingulate gyrus, nucleus accumbens, hippocampus, pons and amygdala, as well as the hypothalamus and pituitary. Expression levels are higher in early (7-9 weeks) than term placentas. Expression levels were increased in both early placentas and molar pregnancies and were reduced in choriocarcinoma cells. Expressed at higher levels in first trimester trophoblasts than at term of gestation. Also found in the extravillous trophoblast suggesting endocrine/paracrine activation mechanism.
INDUCTION: Expressed at higher levels in first trimester trophoblasts than at term of gestation.
DISEASE: Defects in KISS1R are a cause of idiopathic hypogonadotropic hypogonadism (IHH) [MIM:146110]. IHH is defined as a deficiency of the pituitary secretion of follicle-stimulating hormone and luteinizing hormone, which results in the impairment of pubertal maturation and of reproductive function.
DISEASE: Defects in KISS1R are a cause of central precocious puberty (CEPREPU) [MIM:176400]. Precocious puberty is defined as the development of secondary sexual characteristics before the age of 8 years in girls and 9 years in boys. Central precocious puberty refers to a gonadotropin-dependent type which results from premature activation of the hypothalamic-pituitary-gonadal axis.
SIMILARITY: Belongs to the G-protein coupled receptor 1 family.
WEB RESOURCE: Name=Protein Spotlight; Note=Tintin's blight - Issue 58 of May 2005; URL="http://web.expasy.org/spotlight/back_issues/sptlt058.shtml";
WEB RESOURCE: Name=GeneReviews; URL="http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/KISS1R";

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: KISS1R
Diseases sorted by gene-association score: hypogonadotropic hypogonadism 8 with or without anosmia* (1256), precocious puberty, central, 1* (979), normosmic congenital hypogonadotropic hypogonadism* (213), kallmann syndrome* (177), kiss1r-related isolated gonadotropin-releasing hormone deficiency* (100), hypogonadotropic hypogonadism (49), central precocious puberty (40), hypogonadism (38), precocious puberty (36), idiopathic central precocious puberty* (31), hypogonadotropism (7), gonadal disease (5)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 1.70 RPKM in Brain - Hypothalamus
Total median expression: 8.58 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -83.10170-0.489 Picture PostScript Text
3' UTR -73.10257-0.284 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR000276 - 7TM_GPCR_Rhodpsn
IPR017452 - GPCR_Rhodpsn_supfam
IPR008103 - KiSS_1_rcpt

Pfam Domains:
PF00001 - 7 transmembrane receptor (rhodopsin family)
PF10320 - Serpentine type 7TM GPCR chemoreceptor Srsx

SCOP Domains:
81321 - Family A G protein-coupled receptor-like

ModBase Predicted Comparative 3D Structure on Q969F8
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0004871 signal transducer activity
GO:0004930 G-protein coupled receptor activity
GO:0005515 protein binding
GO:0008188 neuropeptide receptor activity
GO:0008528 G-protein coupled peptide receptor activity

Biological Process:
GO:0007165 signal transduction
GO:0007186 G-protein coupled receptor signaling pathway
GO:0007200 phospholipase C-activating G-protein coupled receptor signaling pathway
GO:0007218 neuropeptide signaling pathway

Cellular Component:
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0009986 cell surface
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0043231 intracellular membrane-bounded organelle


-  Descriptions from all associated GenBank mRNAs
  BC141812 - Homo sapiens KISS1 receptor, mRNA (cDNA clone MGC:164830 IMAGE:40147721), complete cds.
AY253982 - Homo sapiens hypogonadotropin-1 (GPR54) mRNA, complete cds.
BC140825 - Homo sapiens KISS1 receptor, mRNA (cDNA clone MGC:176502 IMAGE:9021693), complete cds.
KJ895011 - Synthetic construct Homo sapiens clone ccsbBroadEn_04405 KISS1R gene, encodes complete protein.
AB051065 - Homo sapiens hot7t175 mRNA for G protein-coupled receptor, complete cds.
AF343725 - Homo sapiens G-protein-coupled receptor GPR54 (GPR54) mRNA, complete cds.
AJ309020 - Homo sapiens mRNA for G protein-coupled receptor (AXOR12 gene).
AY029541 - Homo sapiens putative G protein-coupled receptor mRNA, complete cds.
AY253981 - Homo sapiens hypogonadotropin-1 (GPR54) mRNA, complete cds.
EU883577 - Homo sapiens KISS1 receptor (KISS1R) mRNA, complete cds.
BC111094 - Homo sapiens cDNA clone IMAGE:40016819.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein Q969F8 (Reactome details) participates in the following event(s):

R-HSA-388981 The Kiss receptor GPR54 binds kisspeptin
R-HSA-749452 The Ligand:GPCR:Gq complex dissociates
R-HSA-749448 Liganded Gq-activating GPCRs bind inactive heterotrimeric Gq
R-HSA-379048 Liganded Gq/11-activating GPCRs act as GEFs for Gq/11
R-HSA-375276 Peptide ligand-binding receptors
R-HSA-416476 G alpha (q) signalling events
R-HSA-373076 Class A/1 (Rhodopsin-like receptors)
R-HSA-388396 GPCR downstream signalling
R-HSA-500792 GPCR ligand binding
R-HSA-372790 Signaling by GPCR
R-HSA-162582 Signal Transduction

-  Other Names for This Gene
  Alternate Gene Symbols: A5D8U2, AXOR12, B2RTV1, ENST00000234371.1, ENST00000234371.2, ENST00000234371.3, ENST00000234371.4, ENST00000234371.5, ENST00000234371.6, ENST00000234371.7, ENST00000234371.8, ENST00000234371.9, GPR54, KISSR_HUMAN, NM_032551, Q969F8, Q96QG0, uc317dzb.1, uc317dzb.2
UCSC ID: ENST00000234371.10_4
RefSeq Accession: NM_032551.5
Protein: Q969F8 (aka KISSR_HUMAN)

-  GeneReviews for This Gene
  GeneReviews article(s) related to gene KISS1R:
kms (Isolated Gonadotropin-Releasing Hormone (GnRH) Deficiency)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.